Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_M13
(639 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_06_0028 - 9802362-9802475,9802919-9803090,9803167-9803208,980... 33 0.25
05_04_0454 + 21383068-21384525 31 1.0
05_04_0035 + 17378541-17381276 30 1.8
08_02_0744 - 20659326-20659580,20659748-20660005,20660103-206615... 29 2.4
03_02_0983 - 12933082-12934884,12935669-12936487,12936754-129367... 29 3.1
01_06_0255 - 27918447-27918534,27918615-27918685,27919131-279192... 29 3.1
11_06_0232 + 21559467-21559532,21559586-21560200 29 4.1
04_03_1049 + 22015053-22015083,22015770-22015885,22016013-220161... 29 4.1
03_01_0331 - 2609012-2609365,2609579-2609920,2610009-2610257,261... 29 4.1
01_01_0572 - 4244714-4245311,4245694-4245736,4246172-4246283,424... 29 4.1
12_02_1012 - 25281820-25281987,25282337-25282409,25283370-252834... 28 5.4
11_06_0327 - 22392021-22392316,22393879-22394389,22394843-22394908 28 5.4
11_01_0596 + 4755453-4755490,4755675-4756047,4757739-4758940,475... 28 5.4
10_02_0167 - 6100676-6102111,6102174-6102708,6102967-6103975,610... 28 7.2
10_01_0061 + 815761-816117,817298-818002 28 7.2
07_03_0965 - 22996575-22999112,22999202-22999636,22999717-229998... 28 7.2
06_02_0345 + 14833838-14833997,14834095-14834552,14834633-148348... 28 7.2
04_04_0281 + 24121267-24121537,24122567-24122799 28 7.2
03_05_0264 - 22510997-22511012,22511641-22511709,22511783-225119... 28 7.2
03_02_0256 + 6899424-6899876,6900084-6900163,6900475-6900820 28 7.2
03_01_0028 - 274231-275424 28 7.2
02_03_0308 - 17556078-17556216,17556800-17556963 28 7.2
09_01_0066 - 978018-978500,978588-979034,979113-979412,979521-97... 27 9.5
08_01_1021 + 10310634-10310679,10312880-10313757,10314404-10314640 27 9.5
02_04_0654 - 24755339-24755408,24755488-24755624,24756243-247563... 27 9.5
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 27 9.5
02_03_0109 - 15333228-15334793,15335255-15335392,15335496-153357... 27 9.5
>10_06_0028 -
9802362-9802475,9802919-9803090,9803167-9803208,
9803344-9804011,9804098-9804418,9804495-9804833,
9804856-9805109,9805300-9805510
Length = 706
Score = 32.7 bits (71), Expect = 0.25
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Frame = +2
Query: 80 PRVSPLASHAHATAVGLVSNLKKEFE-ARSESET-----GRRMDSRVR-PPTTEQRDRPP 238
P P SH H T V L S +++ E + + +T G +DSR PPTT++ R
Sbjct: 470 PTSRPPPSHPHPTVVSLPSAVEERDEDLQLQYDTKFGVDGMEVDSRPHLPPTTKRSKRAK 529
Query: 239 ASPP 250
+SPP
Sbjct: 530 SSPP 533
>05_04_0454 + 21383068-21384525
Length = 485
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +2
Query: 131 VSNLKKEFEARSESETGRRMDSRVRPPTTEQRDRPPA-SPPTGED 262
+ L F ARS SETG +RV +RD+PPA S P +D
Sbjct: 175 MKTLSPAFSARSSSETGAA--ARVHGSHMPRRDKPPAPSVPRDDD 217
>05_04_0035 + 17378541-17381276
Length = 911
Score = 29.9 bits (64), Expect = 1.8
Identities = 25/75 (33%), Positives = 32/75 (42%)
Frame = +2
Query: 62 ASHGDLPRVSPLASHAHATAVGLVSNLKKEFEARSESETGRRMDSRVRPPTTEQRDRPPA 241
A+H LP +PLA HA A E R RR+ R+ PP R R P+
Sbjct: 38 ATHHLLPPHAPLAPHARGFAFSSAEEAAAERRRRK-----RRL--RIEPPLHALR-RDPS 89
Query: 242 SPPTGEDLSVKVLVD 286
+PP D + L D
Sbjct: 90 APPPPRDPNAPRLPD 104
>08_02_0744 -
20659326-20659580,20659748-20660005,20660103-20661575,
20661677-20661835,20661948-20662074,20662155-20662486,
20662574-20663383,20663772-20664110,20664187-20664340,
20664427-20665143,20665699-20665967
Length = 1630
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 226 GPTARVAAHRGGSIRESVSGPIRPAGPVETRT 321
GPT AA G + SGP PA P +R+
Sbjct: 21 GPTPPAAAAEGEEVARQTSGPPSPATPTRSRS 52
>03_02_0983 -
12933082-12934884,12935669-12936487,12936754-12936795,
12937116-12937244
Length = 930
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/59 (28%), Positives = 32/59 (54%)
Frame = +2
Query: 38 LRRRRVTCASHGDLPRVSPLASHAHATAVGLVSNLKKEFEARSESETGRRMDSRVRPPT 214
L+ + T +S+ ++ +P A+ G +N + + +A S++ RR +RVRPPT
Sbjct: 820 LKNKETTSSSNTEIAHDAPEATR------GGPANPQPDLQASSQAMNPRRQGTRVRPPT 872
>01_06_0255 -
27918447-27918534,27918615-27918685,27919131-27919226,
27919335-27919403,27919489-27919629,27919708-27919761,
27920183-27920236,27920343-27920386,27921012-27921117,
27921197-27921258,27921358-27921679
Length = 368
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 271 ESVSGPIRPAGPVETRTELRVEFRIEQREEFARID 375
ESV+G + P ++T + RVE I + +FAR D
Sbjct: 303 ESVNGILLPFLLIKTSRKARVEIEISEDSKFARFD 337
>11_06_0232 + 21559467-21559532,21559586-21560200
Length = 226
Score = 28.7 bits (61), Expect = 4.1
Identities = 22/54 (40%), Positives = 28/54 (51%)
Frame = +1
Query: 238 RVAAHRGGSIRESVSGPIRPAGPVETRTELRVEFRIEQREEFARIDVEEVQADG 399
RV + RGG + E GP R ELRVE R +RE+ +R EE + DG
Sbjct: 64 RVPSKRGGDVGEG--GPQRRRIASRRHGELRVEARAREREK-SRGGAEE-EVDG 113
>04_03_1049 +
22015053-22015083,22015770-22015885,22016013-22016108,
22016229-22016285,22016468-22016620,22016754-22016838,
22017097-22017187,22017324-22017488,22017813-22017932,
22018020-22018104,22018234-22018402,22019055-22019173,
22019250-22019440,22019746-22019957,22020905-22021500,
22022538-22022658,22023439-22023868,22024412-22024797,
22024976-22025071,22025380-22025432,22026915-22027061,
22027139-22027309,22027880-22027962,22028049-22028247,
22028668-22028789,22029752-22029818,22029960-22030010,
22030768-22031001,22031263-22031451,22032455-22032646,
22032742-22032936
Length = 1673
Score = 28.7 bits (61), Expect = 4.1
Identities = 23/90 (25%), Positives = 35/90 (38%), Gaps = 3/90 (3%)
Frame = +2
Query: 203 RPPTTEQRDRPPASPPTGEDL--SVKVLVDRYDRPDRSRREPNCXXXXXXXXXXXXXXXX 376
+PP +R RPPASP +L S V D+ +P +
Sbjct: 365 QPPLRNKRARPPASPSVVAELPPSFDVDSDQISQPSNGNKSDAPGTSSERSPLESQSRQV 424
Query: 377 XKKCKLTVEGNGSGRAHARTR-SGAATLRN 463
K+ ++G GRA T+ +G LR+
Sbjct: 425 RSCTKVIMQGMAVGRAVDLTKLNGYGDLRS 454
>03_01_0331 -
2609012-2609365,2609579-2609920,2610009-2610257,
2610748-2610750
Length = 315
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = -2
Query: 377 TSIRANSSLCSIRNSTRNSVRVSTGPAGRIGPLTLSRIDPPRWAATRAVG 228
+S+ A S+LC + + + V+TG A R+G + + D AAT +VG
Sbjct: 123 SSVNAISALCEATGT--DVMEVATGAAQRLGAGSTAAADATSCAATASVG 170
>01_01_0572 -
4244714-4245311,4245694-4245736,4246172-4246283,
4246462-4246551,4246625-4246787,4246909-4247015,
4247149-4247230,4247314-4247351,4247434-4247542,
4248031-4248095,4248358-4248468,4248610-4248747
Length = 551
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +2
Query: 197 RVRPPTTEQRDRPPASPPTGED 262
R RPP + D PPASPP ED
Sbjct: 7 RARPPASSPVD-PPASPPAPED 27
>12_02_1012 -
25281820-25281987,25282337-25282409,25283370-25283420,
25283523-25283932,25284083-25284413,25285340-25285439,
25287091-25287370
Length = 470
Score = 28.3 bits (60), Expect = 5.4
Identities = 23/75 (30%), Positives = 33/75 (44%)
Frame = +2
Query: 38 LRRRRVTCASHGDLPRVSPLASHAHATAVGLVSNLKKEFEARSESETGRRMDSRVRPPTT 217
L+R++V A + P ++P A + LV N E +S TGRR + R
Sbjct: 142 LKRKKVN-AEEVESP-IAPPAKRKERSISSLVVNTP---EITPKSLTGRRTRASTRKSAA 196
Query: 218 EQRDRPPASPPTGED 262
RD P PP +D
Sbjct: 197 ALRDLGPIIPPVKKD 211
>11_06_0327 - 22392021-22392316,22393879-22394389,22394843-22394908
Length = 290
Score = 28.3 bits (60), Expect = 5.4
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +1
Query: 238 RVAAHRGGSIRESVSGPIRPAGPVETRTELRVEFRIEQREEFARIDVEEVQ 390
R+ A +G +I +SV+G A E TE E + EEFA+ID++ ++
Sbjct: 229 RMEAEKGTTIVKSVTG----AAAEEIFTEQEDELQALVSEEFAKIDLKSIK 275
>11_01_0596 +
4755453-4755490,4755675-4756047,4757739-4758940,
4759026-4759392
Length = 659
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = -1
Query: 255 PVG--GDAGGRSLCSVVGGRTLESMRRPVSLSERASNSFFKLLTSP 124
PVG GDA GR +V ++ PV++ A F +L SP
Sbjct: 89 PVGLRGDAAGRLFAPLVAAEPEDAGGEPVAVQALALQGFLRLCRSP 134
>10_02_0167 -
6100676-6102111,6102174-6102708,6102967-6103975,
6104006-6105036
Length = 1336
Score = 27.9 bits (59), Expect = 7.2
Identities = 18/69 (26%), Positives = 28/69 (40%)
Frame = +2
Query: 116 TAVGLVSNLKKEFEARSESETGRRMDSRVRPPTTEQRDRPPASPPTGEDLSVKVLVDRYD 295
T G N + + R ++ +R DSR R P+ P + + DR+
Sbjct: 101 TGHGRRRNDDDDGDRRRDNSERQREDSRDPGHHPRNRTLEPSDPSSSSSSASSSSSDRHP 160
Query: 296 RPDRSRREP 322
R R RR+P
Sbjct: 161 RRSRDRRQP 169
>10_01_0061 + 815761-816117,817298-818002
Length = 353
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +2
Query: 173 ETGRRMDSRVRPPTTEQRDRPPASPPTGEDLSVKVLVDRYD 295
E G+ MD+RV P D PPA+ T E +S+ + V YD
Sbjct: 152 EQGKAMDTRVGP-----LDVPPATLSTFEVVSILLCVPAYD 187
>07_03_0965 -
22996575-22999112,22999202-22999636,22999717-22999801,
22999888-22999957,23000050-23000293,23000396-23000482,
23000655-23000706,23000830-23001226,23001324-23001648,
23001748-23001914,23002007-23002547
Length = 1646
Score = 27.9 bits (59), Expect = 7.2
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = -1
Query: 354 PLLDSKLDSQFGSRLDRSGRSYRSTNTFTDRSSPVGGDAGGRSLCSVVGGRTLESMRRPV 175
P++ D G + R RS + + + S P GG +GG SV G + ++RP
Sbjct: 160 PIVWKAADEMIGVPVPRKARSASTKRSSHEWSVPGGGSSGGGGSGSVAGDTS--QIQRPS 217
Query: 174 S 172
S
Sbjct: 218 S 218
>06_02_0345 +
14833838-14833997,14834095-14834552,14834633-14834870,
14834974-14835431,14836554-14836955
Length = 571
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
Frame = +1
Query: 187 HGLQ---GASTHHGTEGPTARVAAHRGGSIRESVS 282
HGL G S H G A + HRGGS+ + +S
Sbjct: 385 HGLDVDDGVSEHEADVGDGAGPSIHRGGSVGDEIS 419
>04_04_0281 + 24121267-24121537,24122567-24122799
Length = 167
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -1
Query: 327 QFGSRLDRSGRSYRSTNTFTDRSSPVGGDAGGRS 226
++ RL R S ST++ + SS GD GGRS
Sbjct: 5 RYSKRLFRRSSSKGSTDSSSSSSSSSDGDVGGRS 38
>03_05_0264 -
22510997-22511012,22511641-22511709,22511783-22511931,
22512235-22512330,22512853-22512981,22513216-22513494,
22513983-22514069
Length = 274
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 197 RVRPPTTEQRDRPPASPPTGED 262
RV PPT+ RPP +PP+ D
Sbjct: 91 RVTPPTSGGCSRPPRAPPSSVD 112
>03_02_0256 + 6899424-6899876,6900084-6900163,6900475-6900820
Length = 292
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = +1
Query: 199 GASTHHGTEGPTARVAAHRGGSIRESVSGPIRPAGP 306
G S G G T AAHRGG R S S P P
Sbjct: 17 GLSLGGGGGGTTDAAAAHRGGCRRPSPSSQCPPLEP 52
>03_01_0028 - 274231-275424
Length = 397
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -1
Query: 459 RRVAAPLLVRACALPLPLPSTVSLHFFDIDSCELFPLLDSKL 334
++ AA L + LP P+ S H D S + FPL+D K+
Sbjct: 70 KKKAAGLKMERIRLPRPILKFCSTHGSDQISLDCFPLVDRKV 111
>02_03_0308 - 17556078-17556216,17556800-17556963
Length = 100
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -2
Query: 287 GPLTLSRIDPPRWAATRAVG 228
GP L + PPRWAA R G
Sbjct: 44 GPWLLPSLSPPRWAANREHG 63
>09_01_0066 -
978018-978500,978588-979034,979113-979412,979521-979855,
980325-980703
Length = 647
Score = 27.5 bits (58), Expect = 9.5
Identities = 17/30 (56%), Positives = 18/30 (60%), Gaps = 5/30 (16%)
Frame = +2
Query: 191 DSRVRPP---TTEQRDRP--PASPPTGEDL 265
D+R RPP T R RP PASPPTG L
Sbjct: 43 DARRRPPPSPTPPARRRPTKPASPPTGAAL 72
>08_01_1021 + 10310634-10310679,10312880-10313757,10314404-10314640
Length = 386
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -1
Query: 441 LLVRACALPLPLPSTVSLHFFDIDSCELF 355
L +R C+L +P S+ SL DID+C LF
Sbjct: 196 LELRDCSLEVPEISSGSLLHLDIDNCCLF 224
>02_04_0654 -
24755339-24755408,24755488-24755624,24756243-24756326,
24756929-24756944,24758035-24758405
Length = 225
Score = 27.5 bits (58), Expect = 9.5
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +2
Query: 161 RSESETGRRMDSRVRPPTTEQRDRPPASPPTGEDLSVKVLVDRYDRPDR 307
R G+R + R RP + EQR PP PP +S + R P R
Sbjct: 11 RGGGTLGKRKE-RDRPSSEEQRAPPPPPPPLFPAMSARPQPPRPAHPAR 58
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +2
Query: 134 SNLKKEFEARSESETGRRMDSRVRPPTTEQRDRPPASPPTGEDLSVKVL 280
S+ + EA S S+ + +PP P P GEDL +VL
Sbjct: 37 SSSSSQGEASSSSQPPPQQQQEEQPPEDAGEGEQPRVPDLGEDLVFEVL 85
>02_03_0109 -
15333228-15334793,15335255-15335392,15335496-15335771,
15336357-15336422,15338140-15338487
Length = 797
Score = 27.5 bits (58), Expect = 9.5
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 519 PPHRQSCRWLRSSTATW 569
PPHR++ R +RS TW
Sbjct: 698 PPHRKAVRMMRSGVLTW 714
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,478,524
Number of Sequences: 37544
Number of extensions: 304176
Number of successful extensions: 1544
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1538
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1573040476
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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