Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_M13
(639 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC103950-1|AAI03951.1| 1111|Homo sapiens KCNT2 protein protein. 31 4.6
BC103948-1|AAI03949.1| 1111|Homo sapiens KCNT2 protein protein. 31 4.6
AY359444-1|AAR06170.1| 1135|Homo sapiens sodium- and chloride-ac... 31 4.6
AL591604-2|CAH72932.1| 1111|Homo sapiens potassium channel, subf... 31 4.6
AL591604-1|CAH72933.1| 1135|Homo sapiens potassium channel, subf... 31 4.6
AL358853-2|CAH71958.1| 1111|Homo sapiens potassium channel, subf... 31 4.6
AL358853-1|CAH71957.1| 1135|Homo sapiens potassium channel, subf... 31 4.6
AL139137-2|CAI16092.1| 1111|Homo sapiens potassium channel, subf... 31 4.6
AL139137-1|CAI16091.1| 1135|Homo sapiens potassium channel, subf... 31 4.6
AL138931-2|CAI15624.1| 1111|Homo sapiens potassium channel, subf... 31 4.6
AL138931-1|CAI15623.1| 1135|Homo sapiens potassium channel, subf... 31 4.6
AC005542-2|AAC32904.1| 461|Homo sapiens KIAA0589, partial CDS p... 31 4.6
AB011161-1|BAA25515.1| 687|Homo sapiens KIAA0589 protein protein. 31 4.6
AL391602-1|CAI12788.3| 1661|Homo sapiens novel protein protein. 30 8.0
AL132768-4|CAI21460.3| 1661|Homo sapiens novel protein protein. 30 8.0
AL079335-1|CAI42289.3| 1661|Homo sapiens novel protein protein. 30 8.0
>BC103950-1|AAI03951.1| 1111|Homo sapiens KCNT2 protein protein.
Length = 1111
Score = 30.7 bits (66), Expect = 4.6
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +2
Query: 17 DTWLRAGLRRRRVTCASHGDLP-RVSPLASHAHATAVGLVSNLKKEFEARSES-ETGRRM 190
D W+R R + C+S GD+P + S T+ +S +E+E +S E G
Sbjct: 910 DLWIRTYARLYQKLCSSTGDVPIGIYRTESQKLTTSESQISISVEEWEDTKDSKEQGHHR 969
Query: 191 DSRVRPPTTEQRDRP 235
+ +++Q D P
Sbjct: 970 SNHRNSTSSDQSDHP 984
>BC103948-1|AAI03949.1| 1111|Homo sapiens KCNT2 protein protein.
Length = 1111
Score = 30.7 bits (66), Expect = 4.6
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +2
Query: 17 DTWLRAGLRRRRVTCASHGDLP-RVSPLASHAHATAVGLVSNLKKEFEARSES-ETGRRM 190
D W+R R + C+S GD+P + S T+ +S +E+E +S E G
Sbjct: 910 DLWIRTYARLYQKLCSSTGDVPIGIYRTESQKLTTSESQISISVEEWEDTKDSKEQGHHR 969
Query: 191 DSRVRPPTTEQRDRP 235
+ +++Q D P
Sbjct: 970 SNHRNSTSSDQSDHP 984
>AY359444-1|AAR06170.1| 1135|Homo sapiens sodium- and
chloride-activated ATP-sensitive potassium channel
protein.
Length = 1135
Score = 30.7 bits (66), Expect = 4.6
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +2
Query: 17 DTWLRAGLRRRRVTCASHGDLP-RVSPLASHAHATAVGLVSNLKKEFEARSES-ETGRRM 190
D W+R R + C+S GD+P + S T+ +S +E+E +S E G
Sbjct: 934 DLWIRTYARLYQKLCSSTGDVPIGIYRTESQKLTTSESQISISVEEWEDTKDSKEQGHHR 993
Query: 191 DSRVRPPTTEQRDRP 235
+ +++Q D P
Sbjct: 994 SNHRNSTSSDQSDHP 1008
>AL591604-2|CAH72932.1| 1111|Homo sapiens potassium channel, subfamily
T, member 2 protein.
Length = 1111
Score = 30.7 bits (66), Expect = 4.6
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +2
Query: 17 DTWLRAGLRRRRVTCASHGDLP-RVSPLASHAHATAVGLVSNLKKEFEARSES-ETGRRM 190
D W+R R + C+S GD+P + S T+ +S +E+E +S E G
Sbjct: 910 DLWIRTYARLYQKLCSSTGDVPIGIYRTESQKLTTSESQISISVEEWEDTKDSKEQGHHR 969
Query: 191 DSRVRPPTTEQRDRP 235
+ +++Q D P
Sbjct: 970 SNHRNSTSSDQSDHP 984
>AL591604-1|CAH72933.1| 1135|Homo sapiens potassium channel, subfamily
T, member 2 protein.
Length = 1135
Score = 30.7 bits (66), Expect = 4.6
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +2
Query: 17 DTWLRAGLRRRRVTCASHGDLP-RVSPLASHAHATAVGLVSNLKKEFEARSES-ETGRRM 190
D W+R R + C+S GD+P + S T+ +S +E+E +S E G
Sbjct: 934 DLWIRTYARLYQKLCSSTGDVPIGIYRTESQKLTTSESQISISVEEWEDTKDSKEQGHHR 993
Query: 191 DSRVRPPTTEQRDRP 235
+ +++Q D P
Sbjct: 994 SNHRNSTSSDQSDHP 1008
>AL358853-2|CAH71958.1| 1111|Homo sapiens potassium channel, subfamily
T, member 2 protein.
Length = 1111
Score = 30.7 bits (66), Expect = 4.6
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +2
Query: 17 DTWLRAGLRRRRVTCASHGDLP-RVSPLASHAHATAVGLVSNLKKEFEARSES-ETGRRM 190
D W+R R + C+S GD+P + S T+ +S +E+E +S E G
Sbjct: 910 DLWIRTYARLYQKLCSSTGDVPIGIYRTESQKLTTSESQISISVEEWEDTKDSKEQGHHR 969
Query: 191 DSRVRPPTTEQRDRP 235
+ +++Q D P
Sbjct: 970 SNHRNSTSSDQSDHP 984
>AL358853-1|CAH71957.1| 1135|Homo sapiens potassium channel, subfamily
T, member 2 protein.
Length = 1135
Score = 30.7 bits (66), Expect = 4.6
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +2
Query: 17 DTWLRAGLRRRRVTCASHGDLP-RVSPLASHAHATAVGLVSNLKKEFEARSES-ETGRRM 190
D W+R R + C+S GD+P + S T+ +S +E+E +S E G
Sbjct: 934 DLWIRTYARLYQKLCSSTGDVPIGIYRTESQKLTTSESQISISVEEWEDTKDSKEQGHHR 993
Query: 191 DSRVRPPTTEQRDRP 235
+ +++Q D P
Sbjct: 994 SNHRNSTSSDQSDHP 1008
>AL139137-2|CAI16092.1| 1111|Homo sapiens potassium channel, subfamily
T, member 2 protein.
Length = 1111
Score = 30.7 bits (66), Expect = 4.6
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +2
Query: 17 DTWLRAGLRRRRVTCASHGDLP-RVSPLASHAHATAVGLVSNLKKEFEARSES-ETGRRM 190
D W+R R + C+S GD+P + S T+ +S +E+E +S E G
Sbjct: 910 DLWIRTYARLYQKLCSSTGDVPIGIYRTESQKLTTSESQISISVEEWEDTKDSKEQGHHR 969
Query: 191 DSRVRPPTTEQRDRP 235
+ +++Q D P
Sbjct: 970 SNHRNSTSSDQSDHP 984
>AL139137-1|CAI16091.1| 1135|Homo sapiens potassium channel, subfamily
T, member 2 protein.
Length = 1135
Score = 30.7 bits (66), Expect = 4.6
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +2
Query: 17 DTWLRAGLRRRRVTCASHGDLP-RVSPLASHAHATAVGLVSNLKKEFEARSES-ETGRRM 190
D W+R R + C+S GD+P + S T+ +S +E+E +S E G
Sbjct: 934 DLWIRTYARLYQKLCSSTGDVPIGIYRTESQKLTTSESQISISVEEWEDTKDSKEQGHHR 993
Query: 191 DSRVRPPTTEQRDRP 235
+ +++Q D P
Sbjct: 994 SNHRNSTSSDQSDHP 1008
>AL138931-2|CAI15624.1| 1111|Homo sapiens potassium channel, subfamily
T, member 2 protein.
Length = 1111
Score = 30.7 bits (66), Expect = 4.6
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +2
Query: 17 DTWLRAGLRRRRVTCASHGDLP-RVSPLASHAHATAVGLVSNLKKEFEARSES-ETGRRM 190
D W+R R + C+S GD+P + S T+ +S +E+E +S E G
Sbjct: 910 DLWIRTYARLYQKLCSSTGDVPIGIYRTESQKLTTSESQISISVEEWEDTKDSKEQGHHR 969
Query: 191 DSRVRPPTTEQRDRP 235
+ +++Q D P
Sbjct: 970 SNHRNSTSSDQSDHP 984
>AL138931-1|CAI15623.1| 1135|Homo sapiens potassium channel, subfamily
T, member 2 protein.
Length = 1135
Score = 30.7 bits (66), Expect = 4.6
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +2
Query: 17 DTWLRAGLRRRRVTCASHGDLP-RVSPLASHAHATAVGLVSNLKKEFEARSES-ETGRRM 190
D W+R R + C+S GD+P + S T+ +S +E+E +S E G
Sbjct: 934 DLWIRTYARLYQKLCSSTGDVPIGIYRTESQKLTTSESQISISVEEWEDTKDSKEQGHHR 993
Query: 191 DSRVRPPTTEQRDRP 235
+ +++Q D P
Sbjct: 994 SNHRNSTSSDQSDHP 1008
>AC005542-2|AAC32904.1| 461|Homo sapiens KIAA0589, partial CDS
protein.
Length = 461
Score = 30.7 bits (66), Expect = 4.6
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +2
Query: 77 LPRVSPLASHAHATAVGL-VSNLKKEFEARSESETGRRMDSRVRPPTTEQRDRPPASPPT 253
LP P A ++ +S+ RS SET + R R ++ Q RP PP
Sbjct: 302 LPCTPPSFEEATTASIATTLSSTSLSIPERSPSETSEQPRYRRRTQSSGQDGRPQEEPPA 361
Query: 254 GEDL 265
EDL
Sbjct: 362 EEDL 365
>AB011161-1|BAA25515.1| 687|Homo sapiens KIAA0589 protein protein.
Length = 687
Score = 30.7 bits (66), Expect = 4.6
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +2
Query: 77 LPRVSPLASHAHATAVGL-VSNLKKEFEARSESETGRRMDSRVRPPTTEQRDRPPASPPT 253
LP P A ++ +S+ RS SET + R R ++ Q RP PP
Sbjct: 528 LPCTPPSFEEATTASIATTLSSTSLSIPERSPSETSEQPRYRRRTQSSGQDGRPQEEPPA 587
Query: 254 GEDL 265
EDL
Sbjct: 588 EEDL 591
>AL391602-1|CAI12788.3| 1661|Homo sapiens novel protein protein.
Length = 1661
Score = 29.9 bits (64), Expect = 8.0
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 86 VSPLASHAHATAVGLVSNLKKEFEARSESETGRRMDSRVRP-PTTEQRDRPPASP 247
VS AS A +GL L + E+ + G R +P P+ +Q RPPASP
Sbjct: 123 VSDCASE-EARLLGLELALSSDAESAAGGPAGVRTGQPAQPAPSAQQPPRPPASP 176
>AL132768-4|CAI21460.3| 1661|Homo sapiens novel protein protein.
Length = 1661
Score = 29.9 bits (64), Expect = 8.0
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 86 VSPLASHAHATAVGLVSNLKKEFEARSESETGRRMDSRVRP-PTTEQRDRPPASP 247
VS AS A +GL L + E+ + G R +P P+ +Q RPPASP
Sbjct: 123 VSDCASE-EARLLGLELALSSDAESAAGGPAGVRTGQPAQPAPSAQQPPRPPASP 176
>AL079335-1|CAI42289.3| 1661|Homo sapiens novel protein protein.
Length = 1661
Score = 29.9 bits (64), Expect = 8.0
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 86 VSPLASHAHATAVGLVSNLKKEFEARSESETGRRMDSRVRP-PTTEQRDRPPASP 247
VS AS A +GL L + E+ + G R +P P+ +Q RPPASP
Sbjct: 123 VSDCASE-EARLLGLELALSSDAESAAGGPAGVRTGQPAQPAPSAQQPPRPPASP 176
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,751,675
Number of Sequences: 237096
Number of extensions: 1381420
Number of successful extensions: 6052
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 5516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6039
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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