Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_M13
         (639 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             27   0.20 
AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    24   1.4  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   7.6  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   7.6  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 26.6 bits (56), Expect = 0.20
 Identities = 17/54 (31%), Positives = 23/54 (42%)
 Frame = +2

Query: 161  RSESETGRRMDSRVRPPTTEQRDRPPASPPTGEDLSVKVLVDRYDRPDRSRREP 322
            RS  ETG   D R       Q+ +  +     E +  K L+D+  R   SRR P
Sbjct: 1289 RSSLETGIPRDQRAMTEARNQQQQASSQQQIPESMRSKALIDQLCR--NSRRTP 1340


>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 218 EQRDRPPASPPTGEDL 265
           EQ   PP +PP GE++
Sbjct: 40  EQEPLPPVTPPQGENM 55


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +2

Query: 5   EAPVDTWLRAGLRRRRVTCASHGDLPR 85
           EA +D++  A   +  ++   HG LPR
Sbjct: 67  EANIDSYTNAAAVKEFLSIYKHGMLPR 93


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +2

Query: 5   EAPVDTWLRAGLRRRRVTCASHGDLPR 85
           EA +D++  A   +  ++   HG LPR
Sbjct: 67  EANIDSYTNAAAVKEFLSIYKHGMLPR 93


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,190
Number of Sequences: 438
Number of extensions: 2643
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19193721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)