Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_M12
         (614 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003140-9|AAB54171.1|   86|Caenorhabditis elegans Acyl-coenzyme...    97   7e-21
Z46794-8|CAA86779.1|  385|Caenorhabditis elegans Hypothetical pr...    79   2e-15
Z68004-6|CAA91987.2|  116|Caenorhabditis elegans Hypothetical pr...    58   4e-09
AL023828-1|CAA19448.1|  115|Caenorhabditis elegans Hypothetical ...    54   1e-07
Z92826-2|CAB07319.1|  266|Caenorhabditis elegans Hypothetical pr...    49   2e-06
U00063-1|AAK18960.1|  146|Caenorhabditis elegans Acyl-coenzyme a...    47   1e-05
Z81120-7|CAB03343.2|  274|Caenorhabditis elegans Hypothetical pr...    42   3e-04
Z95559-11|CAB09005.2|  435|Caenorhabditis elegans Hypothetical p...    34   0.070
U27312-8|AAZ32809.1|  219|Caenorhabditis elegans Hypothetical pr...    33   0.12 
AL033514-12|CAA22099.1|  208|Caenorhabditis elegans Hypothetical...    28   6.1  
U22831-4|AAK20066.1|  633|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>AF003140-9|AAB54171.1|   86|Caenorhabditis elegans Acyl-coenzyme a
           binding proteinprotein 1 protein.
          Length = 86

 Score = 97.5 bits (232), Expect = 7e-21
 Identities = 45/82 (54%), Positives = 61/82 (74%)
 Frame = +1

Query: 214 FDQAAANVRNLKSVPSDSDLLELYALFKQATSGDADPANRPGLLDLRGNAKFDAWHKKAG 393
           FD AAA V+ LK+ PS+ +LL+LYALFKQ T GD +  ++PG+ DL+G AK+ AW +K G
Sbjct: 5   FDDAAATVKTLKTSPSNDELLKLYALFKQGTVGD-NTTDKPGMFDLKGKAKWSAWDEKKG 63

Query: 394 TSKEDAQNAYIAKVEGLVASIG 459
            +K+DAQ AY+A VE L+A  G
Sbjct: 64  LAKDDAQKAYVALVEELIAKYG 85


>Z46794-8|CAA86779.1|  385|Caenorhabditis elegans Hypothetical
           protein R06F6.9 protein.
          Length = 385

 Score = 79.4 bits (187), Expect = 2e-15
 Identities = 41/99 (41%), Positives = 61/99 (61%)
 Frame = +1

Query: 154 RSLLYLNLPIS*VIMSLQEQFDQAAANVRNLKSVPSDSDLLELYALFKQATSGDADPANR 333
           RS+LY N  +S    S Q  F++A  N++ LK  P +   L+LY LFKQAT+GD     R
Sbjct: 10  RSVLY-NPQVSVRSFSAQADFEKAQKNLKTLKEEPDNDVKLQLYGLFKQATAGDVQ-GKR 67

Query: 334 PGLLDLRGNAKFDAWHKKAGTSKEDAQNAYIAKVEGLVA 450
           PG++D  G AK+DAW+   G ++++A+  Y   V GL++
Sbjct: 68  PGMMDFVGRAKYDAWNTLKGQTQDEARANYAKLVGGLIS 106


>Z68004-6|CAA91987.2|  116|Caenorhabditis elegans Hypothetical
           protein F47B10.7 protein.
          Length = 116

 Score = 58.4 bits (135), Expect = 4e-09
 Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
 Frame = +1

Query: 196 MSLQEQFDQAAANVRNL-KSVP---SDSDLLELYALFKQATSGDADPANRPGLLDLRGNA 363
           MSLQE+FD A   ++ L K+ P   S+   L  Y+LFKQA+ GD +  +RPG+  +    
Sbjct: 1   MSLQEKFDAAVEIIQKLPKTGPVATSNDQKLTFYSLFKQASIGDVN-TDRPGIFSIIERK 59

Query: 364 KFDAWHKKAGTSKEDAQNAYIAKVEGLVASI 456
           K+D+W +  G S+++A+  YI  +  +   I
Sbjct: 60  KWDSWKELEGVSQDEAKERYIKALNDMFDKI 90


>AL023828-1|CAA19448.1|  115|Caenorhabditis elegans Hypothetical
           protein Y17G7B.1 protein.
          Length = 115

 Score = 53.6 bits (123), Expect = 1e-07
 Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
 Frame = +1

Query: 214 FDQAAANVRNLKSVPSDSDLLELYALFKQATSGDA--DPANRPGLLDLRGNAKFDAWHKK 387
           F+ AA  +R LKS P+D + L+LYAL+KQA  GD   +        D  G  K+ AW  +
Sbjct: 15  FEIAAEEMRRLKSEPTDRERLKLYALYKQALHGDIPNEDVYPVPAGDEVGRKKYAAWKSQ 74

Query: 388 AGTSKEDAQNAYIAKVEGLVASIG 459
            G + E  +  Y+A  E ++   G
Sbjct: 75  KGANSEKCRADYVAIAEEMIKKYG 98


>Z92826-2|CAB07319.1|  266|Caenorhabditis elegans Hypothetical
           protein C18D11.2 protein.
          Length = 266

 Score = 49.2 bits (112), Expect = 2e-06
 Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
 Frame = +1

Query: 214 FDQAAANVRNL-KSVP---SDSDLLELYALFKQATSGDADPANRPGLLDLRGNAKFDAWH 381
           F+ A   V+NL K  P   S  + L  YALFKQAT G  D   +P   D++G  K++AW+
Sbjct: 4   FETAVFIVQNLPKDGPIKTSTDEKLNFYALFKQATHGKCD-LPKPSFYDIQGVYKWNAWN 62

Query: 382 KKAGTSKEDAQNAYIAKV 435
           K    + ++A+ AY+  +
Sbjct: 63  KLDNMTMDEAKQAYVDSI 80


>U00063-1|AAK18960.1|  146|Caenorhabditis elegans Acyl-coenzyme a
           binding proteinprotein 4 protein.
          Length = 146

 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
 Frame = +1

Query: 199 SLQEQFDQAAANVRNL-KSVP---SDSDLLELYALFKQATSGDADPANRPGLLDLRGNAK 366
           SL EQF+ A   +  L K+ P   S +D L++Y+L+KQATSG  D   +P    +    K
Sbjct: 4   SLDEQFEAAVWIINALPKNGPIKTSINDQLQMYSLYKQATSGKCDTI-QPYFFQIEQRMK 62

Query: 367 FDAWHKKAGTSKEDAQNAYIAKV 435
           ++AW++     + +A+  Y+ K+
Sbjct: 63  WNAWNQLGNMDEAEAKAQYVEKM 85


>Z81120-7|CAB03343.2|  274|Caenorhabditis elegans Hypothetical
           protein T12D8.3 protein.
          Length = 274

 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 21/74 (28%), Positives = 33/74 (44%)
 Frame = +1

Query: 202 LQEQFDQAAANVRNLKSVPSDSDLLELYALFKQATSGDADPANRPGLLDLRGNAKFDAWH 381
           L+ +FD A   +    +      +L+ Y L+KQA  G AD    P   +     KF++W 
Sbjct: 28  LEAKFDAATTRLPGFLTKIDQKTILKFYGLYKQAVEGPADSKKGPYWFETVARKKFNSWL 87

Query: 382 KKAGTSKEDAQNAY 423
             +  S+  A  AY
Sbjct: 88  ANSQMSRSRAMEAY 101


>Z95559-11|CAB09005.2|  435|Caenorhabditis elegans Hypothetical
           protein Y41E3.7a protein.
          Length = 435

 Score = 34.3 bits (75), Expect = 0.070
 Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
 Frame = +1

Query: 268 DLLELYALFKQATSGD-ADPANRPGLLDLRGNAKFDAWHKKAGTSKEDAQNAYIAKVE 438
           D ++L +L KQ   G+ +D  +  G LD+ GN    AW +    S+++A  +++  V+
Sbjct: 49  DRIKLLSLSKQVQHGEISDEFDNAGWLDITGNDVNKAWRELGSLSRDEAMASFVFLVD 106


>U27312-8|AAZ32809.1|  219|Caenorhabditis elegans Hypothetical
           protein F26A1.15 protein.
          Length = 219

 Score = 33.5 bits (73), Expect = 0.12
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +1

Query: 349 LRGNAKFDAWHKKAGTSKEDAQNAYIAKVEGLVASI 456
           + GN K+ AW+K  G +KE+A   Y+  V+ L   I
Sbjct: 157 INGNEKWHAWNKCRGLTKEEASEQYVEAVQKLKIDI 192


>AL033514-12|CAA22099.1|  208|Caenorhabditis elegans Hypothetical
           protein Y75B8A.11 protein.
          Length = 208

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 13/45 (28%), Positives = 21/45 (46%)
 Frame = +1

Query: 322 PANRPGLLDLRGNAKFDAWHKKAGTSKEDAQNAYIAKVEGLVASI 456
           P  RP LL   G A    + K++G   E +QN+   +   +V  +
Sbjct: 25  PEKRPALLSRYGRAVLPRYGKRSGNLMESSQNSLTEESSDVVCQL 69


>U22831-4|AAK20066.1|  633|Caenorhabditis elegans Hypothetical
           protein F47D12.5 protein.
          Length = 633

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 15/62 (24%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
 Frame = +1

Query: 79  LRLFDITYQLF---TAYFNQFVKRNRVERSLLYLNLPIS*VIMSLQEQFDQAAANVRNLK 249
           LR+ D++  ++   T   NQ+V+ N+V + L +L    + +  +L EQ   +  N++ + 
Sbjct: 148 LRILDVSRSMYKHDTKIINQYVQSNKVLKELRFLECSGTDINKNLLEQILNSHDNLQQVA 207

Query: 250 SV 255
           ++
Sbjct: 208 AI 209


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,075,921
Number of Sequences: 27780
Number of extensions: 258725
Number of successful extensions: 578
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 572
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)