Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_M06
(577 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC2C4.16c |rps801|rps8-1|40S ribosomal protein S8|Schizosaccha... 210 1e-55
SPAC521.05 |rps802|rps8-2|40S ribosomal protein S8|Schizosacchar... 209 2e-55
SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase ki... 31 0.16
SPAC3F10.16c |||GTP binding protein, HSR1-related|Schizosaccharo... 29 0.37
SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces pomb... 29 0.64
SPBC12C2.09c |||Haemolysin-III family protein|Schizosaccharomyce... 27 1.5
SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16 |S... 27 2.0
SPAP27G11.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 2.6
SPAC16E8.17c |||succinate-CoA ligase alpha subunit|Schizosacchar... 27 2.6
SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10 |Schizosac... 27 2.6
SPAC13C5.03 |tht1||nuclear membrane protein involved in karyogam... 26 3.4
SPAC1782.01 ||SPAPYUG7.07|proteasome component|Schizosaccharomyc... 25 6.0
SPAC139.03 |||transcription factor, zf-fungal binuclear cluster ... 25 6.0
SPBC27B12.04c |||conserved eukaryotic protein|Schizosaccharomyce... 25 6.0
SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces po... 25 7.9
SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C |Schizosaccharom... 25 7.9
>SPAC2C4.16c |rps801|rps8-1|40S ribosomal protein
S8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 200
Score = 210 bits (513), Expect = 1e-55
Identities = 106/181 (58%), Positives = 130/181 (71%)
Frame = +3
Query: 33 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRL 212
MGI+RD HKR ATG KRA RKKRK+ELGR +NT++GP+RIH VR RGGN K+RALRL
Sbjct: 1 MGITRDSRHKRSATGAKRAQYRKKRKFELGRQPSNTRIGPKRIHEVRVRGGNKKFRALRL 60
Query: 213 DTGNFAWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLLP 392
D+GNF+WGSE ++KTRII V Y+ SNNELVRT TL K+AIV +DA PFR WYE+HY +
Sbjct: 61 DSGNFSWGSEGVSKKTRIIQVAYHPSNNELVRTNTLTKSAIVQIDAAPFRVWYETHYGIL 120
Query: 393 LGRKKGAKLTEAEEAIINKKRSQKTAKKYLSRQRLSKVEGGLEEQFHTGRLLACVASRPG 572
+G KG K T +S+ +K+ +R SKV+ LE QF GRL A V+SRPG
Sbjct: 121 MG-SKGKKATSTP-----NPKSKHVQRKHSARLGDSKVDSALETQFAAGRLYAVVSSRPG 174
Query: 573 Q 575
Q
Sbjct: 175 Q 175
>SPAC521.05 |rps802|rps8-2|40S ribosomal protein
S8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 200
Score = 209 bits (511), Expect = 2e-55
Identities = 106/181 (58%), Positives = 130/181 (71%)
Frame = +3
Query: 33 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRL 212
MGI+RD HKR ATG KRA RKKRK+ELGR +NT++GP+RIH VR RGGN K+RALRL
Sbjct: 1 MGITRDSRHKRSATGAKRAQYRKKRKFELGRQPSNTRIGPKRIHEVRVRGGNKKFRALRL 60
Query: 213 DTGNFAWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLLP 392
D+GNF+WGSE ++KTRII V Y+ SNNELVRT TL K+AIV +DA PFR WYE+HY +
Sbjct: 61 DSGNFSWGSEGVSKKTRIIQVAYHPSNNELVRTNTLTKSAIVQIDAAPFRVWYETHYGIL 120
Query: 393 LGRKKGAKLTEAEEAIINKKRSQKTAKKYLSRQRLSKVEGGLEEQFHTGRLLACVASRPG 572
+G KG K T +S+ +K+ +R SKV+ LE QF GRL A V+SRPG
Sbjct: 121 MG-SKGKKATATP-----TPKSKHVQRKHSARLGDSKVDSALETQFAAGRLYAVVSSRPG 174
Query: 573 Q 575
Q
Sbjct: 175 Q 175
>SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase kinase
Win1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1436
Score = 30.7 bits (66), Expect = 0.16
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = +3
Query: 45 RDHWHKRRATGGKRAPIRKKRKY--ELGRPAANTKLGPQRIHLVRSRGGNTKYRALRLDT 218
RD +K + G K+ + EL +N + Q+ L+ S T YRA+ LDT
Sbjct: 1083 RDRLYKSQLIGRVLDDTTKENRLLKELASSKSNITIRWQQGGLIGSGSFGTVYRAVNLDT 1142
Query: 219 GNFAWGSECSTRKTRI 266
G+ E + K RI
Sbjct: 1143 GDLMAVKEVALHKPRI 1158
>SPAC3F10.16c |||GTP binding protein,
HSR1-related|Schizosaccharomyces pombe|chr 1|||Manual
Length = 616
Score = 29.5 bits (63), Expect = 0.37
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 390 PLGRKKGAKLTEAEEAIINKKRSQKTAKKYLSRQRLSKVEGGL 518
PL R+K +LT E + + S T+KK+ + + SK G+
Sbjct: 569 PLSRRKARQLTALELGVSPEALSSATSKKHNKKNKRSKQRSGV 611
>SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 508
Score = 28.7 bits (61), Expect = 0.64
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +3
Query: 336 VVVDATPFRQWYESHYLLPLGRKKGAKLTEAEEAIINKKRSQKTAKKYLSRQRLSK 503
V DA ++ E ++ +KK +KL EA+ K++ +K KK+ +R S+
Sbjct: 434 VTKDAEESQEDVEMDIVIEKKKKKSSKLKEADGESSKKEKKEKKDKKHKKSKRKSE 489
>SPBC12C2.09c |||Haemolysin-III family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 324
Score = 27.5 bits (58), Expect = 1.5
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -2
Query: 135 WQPGDLTHTSSSYEWAHVC 79
W PG SS++W HVC
Sbjct: 278 WSPGKYDVFGSSHQWFHVC 296
>SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 672
Score = 27.1 bits (57), Expect = 2.0
Identities = 25/83 (30%), Positives = 39/83 (46%)
Frame = +3
Query: 126 PAANTKLGPQRIHLVRSRGGNTKYRALRLDTGNFAWGSECSTRKTRIIDVVYNASNNELV 305
P NT + PQ RSR T R+L +G + S ++ +TR V +AS+N L+
Sbjct: 530 PLQNTVISPQPTR--RSR---TPIRSL---SGRSSVASSRNSSRTRSYSNVSSASSNSLI 581
Query: 306 RTKTLVKNAIVVVDATPFRQWYE 374
+ ++ V TPF +E
Sbjct: 582 SIISSKPSSSTVQRQTPFHSPFE 604
>SPAP27G11.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 689
Score = 26.6 bits (56), Expect = 2.6
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 338 DNSILYQGFGTHQFIVRGIINNI 270
+NS+ +Q F +H FI R +IN I
Sbjct: 541 ENSLYHQSFSSHWFISRLLINPI 563
>SPAC16E8.17c |||succinate-CoA ligase alpha
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 331
Score = 26.6 bits (56), Expect = 2.6
Identities = 13/49 (26%), Positives = 22/49 (44%)
Frame = +1
Query: 16 FLTQPRWVSVVIIGIRGGLRAANVRPFVRRGSMS*VARLPTLSLVPNAS 162
FL P +++IG GG + F+R + S P +S + A+
Sbjct: 228 FLDDPNTQGIILIGEIGGSAEEDAAEFIRAANASRSTPKPVVSFIAGAT 276
>SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 848
Score = 26.6 bits (56), Expect = 2.6
Identities = 23/86 (26%), Positives = 32/86 (37%), Gaps = 3/86 (3%)
Frame = +3
Query: 48 DHWHKRRATGGKRAPIRKKRKY---ELGRPAANTKLGPQRIHLVRSRGGNTKYRALRLDT 218
D W +A G +PIR+ ++Y +L P K H R K R + +
Sbjct: 758 DEWKASKAFGANDSPIRENKRYKHNKLQTPKPADKF-RDNYHKQNKRNREAKERGIGIKV 816
Query: 219 GNFAWGSECSTRKTRIIDVVYNASNN 296
N S RK R + A NN
Sbjct: 817 -NSELKSAVEIRKARELKEKRLAKNN 841
>SPAC13C5.03 |tht1||nuclear membrane protein involved in karyogamy
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 543
Score = 26.2 bits (55), Expect = 3.4
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -3
Query: 374 FIPLPERCGIHHDNSILYQ 318
F+P PE C I+H+ I Q
Sbjct: 477 FLPAPEECNIYHNEHIQVQ 495
>SPAC1782.01 ||SPAPYUG7.07|proteasome component|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1679
Score = 25.4 bits (53), Expect = 6.0
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -3
Query: 431 LSLSELGTFLPSEW 390
LSL+E GTFL EW
Sbjct: 1554 LSLNECGTFLQKEW 1567
>SPAC139.03 |||transcription factor, zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 1|||Manual
Length = 625
Score = 25.4 bits (53), Expect = 6.0
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +3
Query: 18 SDPAKMGISRDHWHKRRATGGKRAPIRKKRKYELGRPAAN 137
S+ K G + RRA A RKK K + GRP +N
Sbjct: 2 SETTKSGSKKSGQTSRRAIHSCLACRRKKLKCDHGRPCSN 41
>SPBC27B12.04c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 817
Score = 25.4 bits (53), Expect = 6.0
Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +3
Query: 231 WGSEC--STRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLLPLGRK 404
WGS+ +K + +V+ +++ + +T L AT F + +S+Y +PL R+
Sbjct: 250 WGSQSYLQEKKAGLAEVLNISTSQQKPKTTALDYEVFRHEMATKFSSFADSYYPVPLDRE 309
Query: 405 K 407
+
Sbjct: 310 Q 310
>SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2812
Score = 25.0 bits (52), Expect = 7.9
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 83 FAARSPPLMPMITTDTHLGWVRKEK 9
F+ + L+P+ITT THL V +K
Sbjct: 1201 FSEKYTQLIPVITTYTHLSEVENKK 1225
>SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1016
Score = 25.0 bits (52), Expect = 7.9
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +3
Query: 381 YLLPLGRKKGAKLTE 425
Y+LPLGRK K TE
Sbjct: 492 YILPLGRKTARKCTE 506
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,646,248
Number of Sequences: 5004
Number of extensions: 57338
Number of successful extensions: 157
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 155
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 246098644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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