Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_M05
(552 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 312 2e-87
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 309 1e-86
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 192 3e-51
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 159 2e-41
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 33 0.002
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 0.89
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 22 3.6
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 22 3.6
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 22 3.6
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 22 4.8
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 21 8.3
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 21 8.3
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 21 8.3
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 312 bits (765), Expect = 2e-87
Identities = 147/149 (98%), Positives = 148/149 (99%)
Frame = +1
Query: 106 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 285
MGKEK+HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 286 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 465
DKLKAERERGITIDIALWKFET KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT
Sbjct: 61 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 120
Query: 466 GEFEAGISKNGQTREHALLAFTLGVKQLI 552
GEFEAGISKNGQTREHALLAFTLGVKQLI
Sbjct: 121 GEFEAGISKNGQTREHALLAFTLGVKQLI 149
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 309 bits (759), Expect = 1e-86
Identities = 146/149 (97%), Positives = 147/149 (98%)
Frame = +1
Query: 106 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 285
MGKEK+HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 286 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 465
DKLKAERERGITIDIALWKFET KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGI 120
Query: 466 GEFEAGISKNGQTREHALLAFTLGVKQLI 552
GEFEAGISKNGQTREHALLAFTLGVKQLI
Sbjct: 121 GEFEAGISKNGQTREHALLAFTLGVKQLI 149
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 192 bits (467), Expect = 3e-51
Identities = 91/92 (98%), Positives = 91/92 (98%)
Frame = +1
Query: 277 WVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 456
WVLDKLKAERERGITIDIALWKFET KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 60
Query: 457 AGTGEFEAGISKNGQTREHALLAFTLGVKQLI 552
AGTGEFEAGISKNGQTREHALLAFTLGVKQLI
Sbjct: 61 AGTGEFEAGISKNGQTREHALLAFTLGVKQLI 92
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 159 bits (385), Expect = 2e-41
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +1
Query: 325 DIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 504
DIALWKFET KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60
Query: 505 REHALLAFTLGVKQLI 552
REHALLAFTLGVKQLI
Sbjct: 61 REHALLAFTLGVKQLI 76
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 33.1 bits (72), Expect = 0.002
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +1
Query: 364 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 468
VT +D PGH FI G D VL+VAA G
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDG 229
Score = 24.6 bits (51), Expect = 0.67
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 118 KVHINIVVIGHVDSGKST 171
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 0.89
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +1
Query: 127 INIVVIGHVDSGKST 171
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 22.2 bits (45), Expect = 3.6
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +2
Query: 455 PLVLVNSKPVSQRTDKRVNTLCSLSHSESS 544
PL V S P+ + +C LSHS +S
Sbjct: 205 PLQPVVSDPIFDKKAMSDLVICKLSHSNAS 234
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 22.2 bits (45), Expect = 3.6
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +2
Query: 455 PLVLVNSKPVSQRTDKRVNTLCSLSHSESS 544
PL V S P+ + +C LSHS +S
Sbjct: 205 PLQPVVSDPIFDKKAMSDLVICKLSHSNAS 234
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 22.2 bits (45), Expect = 3.6
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 349 TGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 450
T KYY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 21.8 bits (44), Expect = 4.8
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 349 TGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 450
T KYY D P + FIKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 21.0 bits (42), Expect = 8.3
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 208 DKRTIEKFEKEAQEMG 255
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 21.0 bits (42), Expect = 8.3
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 208 DKRTIEKFEKEAQEMG 255
DK+ KFE+EA+++G
Sbjct: 112 DKKFRVKFEEEAKKLG 127
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 21.0 bits (42), Expect = 8.3
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 208 DKRTIEKFEKEAQEMG 255
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,802
Number of Sequences: 438
Number of extensions: 3089
Number of successful extensions: 17
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15827139
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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