Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_M02
(435 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 186 6e-48
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 186 6e-48
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 136 9e-33
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 136 9e-33
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 136 9e-33
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 120 3e-28
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 120 3e-28
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 120 5e-28
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 120 5e-28
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 115 1e-26
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 109 9e-25
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 109 9e-25
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 109 9e-25
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 98 2e-21
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 98 2e-21
AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical ... 84 5e-17
AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock pr... 54 3e-08
L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein. 51 3e-07
AF003740-9|AAC48140.1| 852|Caenorhabditis elegans Hypothetical ... 31 0.48
Z75549-9|CAA99914.1| 357|Caenorhabditis elegans Hypothetical pr... 28 2.5
M38249-1|AAA28060.1| 357|Caenorhabditis elegans G protein alpha... 28 2.5
AY008124-1|AAG32077.1| 357|Caenorhabditis elegans heterotrimeri... 28 2.5
AC024810-8|AAU20830.1| 1446|Caenorhabditis elegans Hypothetical ... 27 4.4
U40942-8|AAC47073.2| 684|Caenorhabditis elegans Hypothetical pr... 27 5.9
U23529-4|AAK39164.2| 545|Caenorhabditis elegans Hypothetical pr... 27 5.9
U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical pr... 27 7.8
U23147-7|AAC46691.1| 596|Caenorhabditis elegans Rapsyn protein ... 27 7.8
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 186 bits (453), Expect = 6e-48
Identities = 89/112 (79%), Positives = 101/112 (90%)
Frame = +2
Query: 98 YKDKSKPTDIRLSNINAAKAVSDAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMSV 277
+KDK KP +R SNI AAKAV+DA+RTSLGPRGMDKMIQ+ NG+VTITNDGATIL QMSV
Sbjct: 23 FKDKDKPESVRNSNIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSV 82
Query: 278 IHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISD 433
IHP AKMLVELS+AQDIEAGDGTT+VVV+AGALLD+A+ LL KGIHPT IS+
Sbjct: 83 IHPTAKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISE 134
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 186 bits (453), Expect = 6e-48
Identities = 89/112 (79%), Positives = 101/112 (90%)
Frame = +2
Query: 98 YKDKSKPTDIRLSNINAAKAVSDAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMSV 277
+KDK KP +R SNI AAKAV+DA+RTSLGPRGMDKMIQ+ NG+VTITNDGATIL QMSV
Sbjct: 23 FKDKDKPESVRNSNIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSV 82
Query: 278 IHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISD 433
IHP AKMLVELS+AQDIEAGDGTT+VVV+AGALLD+A+ LL KGIHPT IS+
Sbjct: 83 IHPTAKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISE 134
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 136 bits (328), Expect = 9e-33
Identities = 63/100 (63%), Positives = 85/100 (85%)
Frame = +2
Query: 134 SNINAAKAVSDAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMSVIHPAAKMLVELS 313
S+I AA+AV++ +RTSLGPRG+DKM+ + +G+VTITNDGATI+++M V H AK++VELS
Sbjct: 37 SHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLMVELS 96
Query: 314 RAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISD 433
++QD E GDGTT VVV+AGALL+ AEKL+ +GIHP I+D
Sbjct: 97 KSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIAD 136
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 136 bits (328), Expect = 9e-33
Identities = 63/100 (63%), Positives = 85/100 (85%)
Frame = +2
Query: 134 SNINAAKAVSDAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMSVIHPAAKMLVELS 313
S+I AA+AV++ +RTSLGPRG+DKM+ + +G+VTITNDGATI+++M V H AK++VELS
Sbjct: 37 SHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLMVELS 96
Query: 314 RAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISD 433
++QD E GDGTT VVV+AGALL+ AEKL+ +GIHP I+D
Sbjct: 97 KSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIAD 136
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 136 bits (328), Expect = 9e-33
Identities = 63/100 (63%), Positives = 85/100 (85%)
Frame = +2
Query: 134 SNINAAKAVSDAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMSVIHPAAKMLVELS 313
S+I AA+AV++ +RTSLGPRG+DKM+ + +G+VTITNDGATI+++M V H AK++VELS
Sbjct: 37 SHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLMVELS 96
Query: 314 RAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISD 433
++QD E GDGTT VVV+AGALL+ AEKL+ +GIHP I+D
Sbjct: 97 KSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIAD 136
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 120 bits (290), Expect = 3e-28
Identities = 55/101 (54%), Positives = 78/101 (77%)
Frame = +2
Query: 125 IRLSNINAAKAVSDAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMSVIHPAAKMLV 304
IR N+ AA A+++ +++SLGP G+DKM+ G+V +TNDGATILKQ+ V HPA K+LV
Sbjct: 21 IRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVEHPAGKVLV 80
Query: 305 ELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVI 427
EL++ QD E GDGTTSVV++A LL A++L+++ +HPT I
Sbjct: 81 ELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTI 121
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 120 bits (290), Expect = 3e-28
Identities = 55/101 (54%), Positives = 78/101 (77%)
Frame = +2
Query: 125 IRLSNINAAKAVSDAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMSVIHPAAKMLV 304
IR N+ AA A+++ +++SLGP G+DKM+ G+V +TNDGATILKQ+ V HPA K+LV
Sbjct: 21 IRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVEHPAGKVLV 80
Query: 305 ELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVI 427
EL++ QD E GDGTTSVV++A LL A++L+++ +HPT I
Sbjct: 81 ELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTI 121
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 120 bits (289), Expect = 5e-28
Identities = 52/99 (52%), Positives = 76/99 (76%)
Frame = +2
Query: 131 LSNINAAKAVSDAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMSVIHPAAKMLVEL 310
+SNINA + V+D+IRT+LGPRG+DK+I S G TI+NDGATILK + ++ PAA +V++
Sbjct: 23 ISNINACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDGATILKLLDIVFPAASTMVDI 82
Query: 311 SRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVI 427
+R+QD E GDGTTSVVV+A +L + ++ G+HP ++
Sbjct: 83 ARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLL 121
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 120 bits (289), Expect = 5e-28
Identities = 52/99 (52%), Positives = 76/99 (76%)
Frame = +2
Query: 131 LSNINAAKAVSDAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMSVIHPAAKMLVEL 310
+SNINA + V+D+IRT+LGPRG+DK+I S G TI+NDGATILK + ++ PAA +V++
Sbjct: 23 ISNINACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDGATILKLLDIVFPAASTMVDI 82
Query: 311 SRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVI 427
+R+QD E GDGTTSVVV+A +L + ++ G+HP ++
Sbjct: 83 ARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLL 121
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 115 bits (277), Expect = 1e-26
Identities = 50/101 (49%), Positives = 75/101 (74%)
Frame = +2
Query: 125 IRLSNINAAKAVSDAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMSVIHPAAKMLV 304
+++ NINA K ++D IRTSLGPR M KM+ G + +TNDG IL++++V HPAAK ++
Sbjct: 24 VQIGNINACKTIADVIRTSLGPRAMLKMLMDPMGGIVMTNDGNAILREITVKHPAAKSMI 83
Query: 305 ELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVI 427
E++R QD E GDGTTSV+++AG ++ A+ L++ HPT+I
Sbjct: 84 EIARTQDEETGDGTTSVIILAGEVMAHAQTYLEQKTHPTLI 124
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 109 bits (262), Expect = 9e-25
Identities = 56/106 (52%), Positives = 77/106 (72%), Gaps = 5/106 (4%)
Frame = +2
Query: 128 RLSNINAAKAVSDAIRTSLGPRGMDKMIQASN----GEVTITNDGATILKQMSVIHPAAK 295
RLS+ A A+ D ++++LGP+GMDK++ + N G + +TNDGATILK + V +PAAK
Sbjct: 20 RLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTNDGATILKSIGVDNPAAK 79
Query: 296 MLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHP-TVIS 430
+LV++S QD E GDGTTSV V+A LL AEKL+ + IHP T+IS
Sbjct: 80 VLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTIIS 125
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 109 bits (262), Expect = 9e-25
Identities = 56/106 (52%), Positives = 77/106 (72%), Gaps = 5/106 (4%)
Frame = +2
Query: 128 RLSNINAAKAVSDAIRTSLGPRGMDKMIQASN----GEVTITNDGATILKQMSVIHPAAK 295
RLS+ A A+ D ++++LGP+GMDK++ + N G + +TNDGATILK + V +PAAK
Sbjct: 20 RLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTNDGATILKSIGVDNPAAK 79
Query: 296 MLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHP-TVIS 430
+LV++S QD E GDGTTSV V+A LL AEKL+ + IHP T+IS
Sbjct: 80 VLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTIIS 125
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 109 bits (262), Expect = 9e-25
Identities = 56/106 (52%), Positives = 77/106 (72%), Gaps = 5/106 (4%)
Frame = +2
Query: 128 RLSNINAAKAVSDAIRTSLGPRGMDKMIQASN----GEVTITNDGATILKQMSVIHPAAK 295
RLS+ A A+ D ++++LGP+GMDK++ + N G + +TNDGATILK + V +PAAK
Sbjct: 20 RLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTNDGATILKSIGVDNPAAK 79
Query: 296 MLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHP-TVIS 430
+LV++S QD E GDGTTSV V+A LL AEKL+ + IHP T+IS
Sbjct: 80 VLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTIIS 125
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 98.3 bits (234), Expect = 2e-21
Identities = 41/99 (41%), Positives = 68/99 (68%)
Frame = +2
Query: 137 NINAAKAVSDAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMSVIHPAAKMLVELSR 316
NI+ A+ + D +R++LGP+G KM+ + G++ +T DG +L +M++ HP A M+ + S
Sbjct: 23 NISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLLHEMAIQHPTASMIAKAST 82
Query: 317 AQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISD 433
AQD GDGTTS V++ G LL AE L+ +G+HP ++++
Sbjct: 83 AQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTE 121
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 98.3 bits (234), Expect = 2e-21
Identities = 41/99 (41%), Positives = 68/99 (68%)
Frame = +2
Query: 137 NINAAKAVSDAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMSVIHPAAKMLVELSR 316
NI+ A+ + D +R++LGP+G KM+ + G++ +T DG +L +M++ HP A M+ + S
Sbjct: 23 NISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLLHEMAIQHPTASMIAKAST 82
Query: 317 AQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISD 433
AQD GDGTTS V++ G LL AE L+ +G+HP ++++
Sbjct: 83 AQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTE 121
>AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical
protein Y55F3AR.3 protein.
Length = 581
Score = 83.8 bits (198), Expect = 5e-17
Identities = 37/98 (37%), Positives = 64/98 (65%)
Frame = +2
Query: 137 NINAAKAVSDAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMSVIHPAAKMLVELSR 316
NI A ++ IR++ GP GM+KM+ ++ +TND ATILK++ + HPAA++++ +
Sbjct: 31 NIEACTELASQIRSAYGPNGMNKMVINHIEKLFVTNDAATILKELEIQHPAARIIIMATE 90
Query: 317 AQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVIS 430
Q+ + GD T +VV++A ALL+ A L+ G+ P ++
Sbjct: 91 MQEKQIGDNTNTVVILAAALLEHAANLIHMGMTPQEVA 128
>AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock
protein protein 60 protein.
Length = 568
Score = 54.4 bits (125), Expect = 3e-08
Identities = 30/107 (28%), Positives = 58/107 (54%), Gaps = 4/107 (3%)
Frame = +2
Query: 101 KDKSKPTDIRLSNINAAKAVSDAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMSV- 277
KD + R + + ++DA+ ++GP+G + +I+ S G IT DG T+ K + +
Sbjct: 19 KDVKFGAEGRQAMLVGVNLLADAVSVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIDLK 78
Query: 278 ---IHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKG 409
+ AK++ +++ + EAGDGTT V+A A+ + +++G
Sbjct: 79 DKYQNLGAKLIQDVANKANEEAGDGTTCATVLARAIAKEGFESIRQG 125
>L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein.
Length = 568
Score = 51.2 bits (117), Expect = 3e-07
Identities = 28/96 (29%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Frame = +2
Query: 101 KDKSKPTDIRLSNINAAKAVSDAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMSV- 277
KD + R + + ++DA+ ++GP+G + +I+ S G IT DG T+ K + +
Sbjct: 19 KDVKFGAEGRQAMLVGVNLLADAVSVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIDLK 78
Query: 278 ---IHPAAKMLVELSRAQDIEAGDGTTSVVVIAGAL 376
+ AK++ +++ + EAGDGTT V+ A+
Sbjct: 79 DKYQNLGAKLIQDVANKANEEAGDGTTCATVLTRAI 114
>AF003740-9|AAC48140.1| 852|Caenorhabditis elegans Hypothetical
protein C41D11.6 protein.
Length = 852
Score = 30.7 bits (66), Expect = 0.48
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +2
Query: 125 IRLSNINAAKAVSDAIRTSLGPRGMDKMIQASNGEV 232
I +N A KA+ DAIR SL PRG K+++A + +
Sbjct: 669 ISANNNGAVKAIHDAIR-SLAPRGRVKVVRAMSARL 703
>Z75549-9|CAA99914.1| 357|Caenorhabditis elegans Hypothetical
protein T19C4.6 protein.
Length = 357
Score = 28.3 bits (60), Expect = 2.5
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +2
Query: 251 ATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKL 397
+T+LKQM +IH + E+S +++ + V GALLD ++L
Sbjct: 47 STVLKQMKIIHNSGFSQEEISNKRNVVC----ANTVQAMGALLDGMKQL 91
>M38249-1|AAA28060.1| 357|Caenorhabditis elegans G protein alpha
subunit protein.
Length = 357
Score = 28.3 bits (60), Expect = 2.5
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +2
Query: 251 ATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKL 397
+T+LKQM +IH + E+S +++ + V GALLD ++L
Sbjct: 47 STVLKQMKIIHNSGFSQEEISNKRNVVC----ANTVQAMGALLDGMKQL 91
>AY008124-1|AAG32077.1| 357|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 357
Score = 28.3 bits (60), Expect = 2.5
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +2
Query: 251 ATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKL 397
+T+LKQM +IH + E+S +++ + V GALLD ++L
Sbjct: 47 STVLKQMKIIHNSGFSQEEISNKRNVVC----ANTVQAMGALLDGMKQL 91
>AC024810-8|AAU20830.1| 1446|Caenorhabditis elegans Hypothetical
protein Y54E10A.11 protein.
Length = 1446
Score = 27.5 bits (58), Expect = 4.4
Identities = 12/36 (33%), Positives = 14/36 (38%)
Frame = -3
Query: 274 THLFKNSSTIICNSHFTIRCLNHFIHSSRSQTCPNC 167
TH C + F CL + SS TCP C
Sbjct: 1406 THQLPKIKCKQCKNKFHSNCLYKWFESSNQSTCPLC 1441
>U40942-8|AAC47073.2| 684|Caenorhabditis elegans Hypothetical
protein K02E10.7 protein.
Length = 684
Score = 27.1 bits (57), Expect = 5.9
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 230 VTITNDGATILKQMSVIHPAAKMLVELSRAQDI 328
+T ++G+T+ K +S+ HPA +S QDI
Sbjct: 90 LTAHDEGSTLQKIISIEHPAIVQTFSVSHFQDI 122
>U23529-4|AAK39164.2| 545|Caenorhabditis elegans Hypothetical
protein C15B12.4 protein.
Length = 545
Score = 27.1 bits (57), Expect = 5.9
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +2
Query: 122 DIRLSNINAAKAVSDAIRTSLGPRGMDKMIQASNGEVTITND 247
+IR S + S ++ T++ P G+ K+I SNG +I++D
Sbjct: 347 NIRGSGSDTNSLASQSVETAVDPSGIVKIISKSNGS-SISHD 387
>U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical
protein C25A8.4 protein.
Length = 1067
Score = 26.6 bits (56), Expect = 7.8
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -3
Query: 295 FSSWMDYTHLFKNSSTIICNSH 230
+S + DY HL K +S I+ +SH
Sbjct: 528 YSDFYDYEHLNKTASLIVLHSH 549
>U23147-7|AAC46691.1| 596|Caenorhabditis elegans Rapsyn protein 1
protein.
Length = 596
Score = 26.6 bits (56), Expect = 7.8
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -3
Query: 241 CNSHFTIRCLNHFIHSSRSQTCPNC 167
C+ F +CL+ ++ QTCP C
Sbjct: 393 CSHIFHEKCLHTYLLQRTDQTCPKC 417
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,392,056
Number of Sequences: 27780
Number of extensions: 148895
Number of successful extensions: 443
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 437
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 735312162
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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