Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_M02
         (435 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex det...    24   0.64 
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          24   0.85 
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      24   0.85 
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   1.5  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   6.0  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   6.0  
DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex det...    21   6.0  
DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex det...    21   6.0  
DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex det...    21   6.0  
DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex det...    21   6.0  
DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex det...    21   6.0  
DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex det...    21   6.0  
DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex det...    21   6.0  
DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex det...    21   6.0  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   6.0  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    21   6.0  

>AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 24.2 bits (50), Expect = 0.64
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 13  ISSSCYYLNKYYNGS 57
           +S+SC Y N YYN +
Sbjct: 307 LSNSCNYSNNYYNNN 321


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 0.85
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +2

Query: 98  YKDKSKPTDIRLSNINAAKAVSDAIRTSLGPR 193
           Y+   KP +  ++ INA K +  AIR  +GP+
Sbjct: 493 YRLNHKPFNFHIT-INADKPMKAAIRIFIGPK 523


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 0.85
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +2

Query: 98  YKDKSKPTDIRLSNINAAKAVSDAIRTSLGPR 193
           Y+   KP +  ++ INA K +  AIR  +GP+
Sbjct: 493 YRLNHKPFNFHIT-INADKPMKAAIRIFIGPK 523


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +2

Query: 227 EVTITNDGATILKQMSVIHPAAKMLVELSRAQDI 328
           E+ + NDG+  L ++ +IH A        R QD+
Sbjct: 358 EIRVFNDGSLYLTKVQLIH-AGNYTCHAVRNQDV 390


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -1

Query: 435 PSEITVG*MPFCNNFSAESSKAPAMTTT 352
           P+E+T+G     ++     S+A A TTT
Sbjct: 279 PTEVTIGGGGTTSSRRTTGSRAAATTTT 306


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -1

Query: 435 PSEITVG*MPFCNNFSAESSKAPAMTTT 352
           P+E+T+G     ++     S+A A TTT
Sbjct: 279 PTEVTIGGGGTTSSRRTTGSRAAATTTT 306


>DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -3

Query: 58  WSHYNICSNNNSY 20
           +S+YN  +NNN+Y
Sbjct: 91  YSNYNNYNNNNNY 103


>DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -3

Query: 58  WSHYNICSNNNSY 20
           +S+YN  +NNN+Y
Sbjct: 91  YSNYNNYNNNNNY 103


>DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -3

Query: 58  WSHYNICSNNNSY 20
           +S+YN  +NNN+Y
Sbjct: 91  YSNYNNYNNNNNY 103


>DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -3

Query: 58  WSHYNICSNNNSY 20
           +S+YN  +NNN+Y
Sbjct: 91  YSNYNNYNNNNNY 103


>DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -3

Query: 58  WSHYNICSNNNSY 20
           +S+YN  +NNN+Y
Sbjct: 91  YSNYNNYNNNNNY 103


>DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -3

Query: 58  WSHYNICSNNNSY 20
           +S+YN  +NNN+Y
Sbjct: 91  YSNYNNYNNNNNY 103


>DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -3

Query: 58  WSHYNICSNNNSY 20
           +S+YN  +NNN+Y
Sbjct: 91  YSNYNNYNNNNNY 103


>DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -3

Query: 58  WSHYNICSNNNSY 20
           +S+YN  +NNN+Y
Sbjct: 91  YSNYNNYNNNNNY 103


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -1

Query: 435 PSEITVG*MPFCNNFSAESSKAPAMTTT 352
           P+E+T+G     ++     S+A A TTT
Sbjct: 279 PTEVTIGGGGTTSSRRTTGSRAAATTTT 306


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 361 HCRCFTRFC*EIITKRHSSHSNF 429
           H  C TR     I K+H+  +NF
Sbjct: 296 HNNCLTRIPSTRINKQHTRGNNF 318


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,492
Number of Sequences: 438
Number of extensions: 1945
Number of successful extensions: 17
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11368164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)