Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_M01
         (517 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC025695-1|AAH25695.1|  351|Homo sapiens endothelial differentia...    31   2.4  
AY322548-1|AAP84361.1|  351|Homo sapiens endothelial differentia...    31   2.4  
AF233092-1|AAF43409.1|  351|Homo sapiens lysophosphatidic acid G...    31   2.4  
AF197929-1|AAG28521.1|  351|Homo sapiens lysophosphatidic acid r...    31   2.4  
AF011466-1|AAC27728.1|  382|Homo sapiens G protein-coupled recep...    31   2.4  
AC002306-1|AAB61528.1|  351|Homo sapiens R33799_1 protein.             31   2.4  

>BC025695-1|AAH25695.1|  351|Homo sapiens endothelial
           differentiation, lysophosphatidic acid G-protein-coupled
           receptor,  protein.
          Length = 351

 Score = 31.1 bits (67), Expect = 2.4
 Identities = 14/49 (28%), Positives = 29/49 (59%)
 Frame = -1

Query: 472 TVIAIYLDDNRSIASAELRMCVMEGRMRLLITGLLSSNTLLYIYPVYKW 326
           T++AI ++ +RS+ + +L   +  GR+ +LI G+  +   L + P + W
Sbjct: 121 TLLAIAVERHRSVMAVQLHSRLPRGRVVMLIVGVWVAALGLGLLPAHSW 169


>AY322548-1|AAP84361.1|  351|Homo sapiens endothelial
           differentiation G-protein-coupled receptor 4 protein.
          Length = 351

 Score = 31.1 bits (67), Expect = 2.4
 Identities = 14/49 (28%), Positives = 29/49 (59%)
 Frame = -1

Query: 472 TVIAIYLDDNRSIASAELRMCVMEGRMRLLITGLLSSNTLLYIYPVYKW 326
           T++AI ++ +RS+ + +L   +  GR+ +LI G+  +   L + P + W
Sbjct: 121 TLLAIAVERHRSVMAVQLHSRLPRGRVVMLIVGVWVAALGLGLLPAHSW 169


>AF233092-1|AAF43409.1|  351|Homo sapiens lysophosphatidic acid G
           protein-coupled receptor 4 protein.
          Length = 351

 Score = 31.1 bits (67), Expect = 2.4
 Identities = 14/49 (28%), Positives = 29/49 (59%)
 Frame = -1

Query: 472 TVIAIYLDDNRSIASAELRMCVMEGRMRLLITGLLSSNTLLYIYPVYKW 326
           T++AI ++ +RS+ + +L   +  GR+ +LI G+  +   L + P + W
Sbjct: 121 TLLAIAVERHRSVMAVQLHSRLPRGRVVMLIVGVWVAALGLGLLPAHSW 169


>AF197929-1|AAG28521.1|  351|Homo sapiens lysophosphatidic acid
           receptor EDG4 protein.
          Length = 351

 Score = 31.1 bits (67), Expect = 2.4
 Identities = 14/49 (28%), Positives = 29/49 (59%)
 Frame = -1

Query: 472 TVIAIYLDDNRSIASAELRMCVMEGRMRLLITGLLSSNTLLYIYPVYKW 326
           T++AI ++ +RS+ + +L   +  GR+ +LI G+  +   L + P + W
Sbjct: 121 TLLAIAVERHRSVMAVQLHSRLPRGRVVMLIVGVWVAALGLGLLPAHSW 169


>AF011466-1|AAC27728.1|  382|Homo sapiens G protein-coupled receptor
           Edg-4 protein.
          Length = 382

 Score = 31.1 bits (67), Expect = 2.4
 Identities = 14/49 (28%), Positives = 29/49 (59%)
 Frame = -1

Query: 472 TVIAIYLDDNRSIASAELRMCVMEGRMRLLITGLLSSNTLLYIYPVYKW 326
           T++AI ++ +RS+ + +L   +  GR+ +LI G+  +   L + P + W
Sbjct: 121 TLLAIAVERHRSVMAVQLHSRLPRGRVVMLIVGVWVAALGLGLLPAHSW 169


>AC002306-1|AAB61528.1|  351|Homo sapiens R33799_1 protein.
          Length = 351

 Score = 31.1 bits (67), Expect = 2.4
 Identities = 14/49 (28%), Positives = 29/49 (59%)
 Frame = -1

Query: 472 TVIAIYLDDNRSIASAELRMCVMEGRMRLLITGLLSSNTLLYIYPVYKW 326
           T++AI ++ +RS+ + +L   +  GR+ +LI G+  +   L + P + W
Sbjct: 121 TLLAIAVERHRSVMAVQLHSRLPRGRVVMLIVGVWVAALGLGLLPAHSW 169


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,997,985
Number of Sequences: 237096
Number of extensions: 1523082
Number of successful extensions: 1653
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1653
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)