Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_M01
         (517 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY129459-1|AAM76201.1|  373|Drosophila melanogaster RH08077p pro...    28   8.6  
AE014296-2909|AAF49343.1|  373|Drosophila melanogaster CG3874-PA...    28   8.6  
AB062677-1|BAB62105.1|  373|Drosophila melanogaster UDP-sugar tr...    28   8.6  

>AY129459-1|AAM76201.1|  373|Drosophila melanogaster RH08077p
           protein.
          Length = 373

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +2

Query: 161 LTSVVINCMTPIQVTFL*SIRGNGYL*LQLNCGG 262
           LT+ ++ C+  I VT+L    G  Y+   LNC G
Sbjct: 304 LTTTIVGCLKNICVTYLGMFIGGDYVFSWLNCIG 337


>AE014296-2909|AAF49343.1|  373|Drosophila melanogaster CG3874-PA
           protein.
          Length = 373

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +2

Query: 161 LTSVVINCMTPIQVTFL*SIRGNGYL*LQLNCGG 262
           LT+ ++ C+  I VT+L    G  Y+   LNC G
Sbjct: 304 LTTTIVGCLKNICVTYLGMFIGGDYVFSWLNCIG 337


>AB062677-1|BAB62105.1|  373|Drosophila melanogaster UDP-sugar
           transporter protein.
          Length = 373

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +2

Query: 161 LTSVVINCMTPIQVTFL*SIRGNGYL*LQLNCGG 262
           LT+ ++ C+  I VT+L    G  Y+   LNC G
Sbjct: 304 LTTTIVGCLKNICVTYLGMFIGGDYVFSWLNCIG 337


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,109,954
Number of Sequences: 53049
Number of extensions: 458494
Number of successful extensions: 661
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 661
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1887744768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)