Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_L24
(443 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC56F2.12 |ilv5||acetohydroxyacid reductoisomerase|Schizosacch... 28 0.74
SPCC18.14c |rpp0||60S acidic ribosomal protein Rpp0 |Schizosacch... 27 1.7
SPAC144.15c |cog1||Golgi transport complex subunit Cog1 |Schizos... 27 1.7
SPAP8A3.07c |||phospho-2-dehydro-3-deoxyheptonate aldolase |Schi... 26 2.3
SPAC13C5.07 |rad32|mre11|Rad32 nuclease|Schizosaccharomyces pomb... 26 2.3
SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces p... 26 2.3
SPBC36B7.08c |||nucleosome assembly protein |Schizosaccharomyces... 26 3.0
SPCC1393.13 |||DUF89 family protein|Schizosaccharomyces pombe|ch... 26 3.0
SPBC15D4.07c |atg9|apg9|autophagy associated protein Atg9 |Schiz... 26 3.0
SPAC26A3.09c |rga2||GTPase activating protein Rga2|Schizosacchar... 25 4.0
SPAC823.12 |||zinc finger protein Pep5/Vps11 |Schizosaccharomyce... 25 4.0
SPBC776.10c |cog6||Golgi transport complex peripheral subunit Co... 25 4.0
SPAC18B11.06 |||U3 snoRNP-associated protein Lcp5 |Schizosacchar... 25 5.2
SPBC365.02c |cox10||protoheme IX farnesyltransferase|Schizosacch... 25 5.2
SPBPJ4664.06 |gpt1||UDP-glucose-glycoprotein glucosyltransferase... 24 9.1
SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual 24 9.1
SPAC16A10.07c |taz1|myb1, myb|human TRF ortholog Taz1|Schizosacc... 24 9.1
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 24 9.1
>SPBC56F2.12 |ilv5||acetohydroxyacid
reductoisomerase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 404
Score = 27.9 bits (59), Expect = 0.74
Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 2/108 (1%)
Frame = +1
Query: 40 ETSNKILEMYKKTLEPQLKQLYETLGKMLQEYLESFIDIVAHFGAL--ISDFFEKHKLEI 213
E + E + +T+E + LY +GK +Y+ + A GA+ F E +K +
Sbjct: 287 ERGHSPAEAFNETVEEATQSLYPLIGKYGLDYMFAACSTTARRGAIDWTPRFLEANKKVL 346
Query: 214 HELTNIVTEMFKDITRLIVAQLKELPGKITQVYEELVKLINNMPIIEA 357
+EL + V E + R + + P ++Y++ ++ I N+ I +A
Sbjct: 347 NELYDNV-ENGNEAKRSL--EYNSAP-NYRELYDKELEEIRNLEIWKA 390
>SPCC18.14c |rpp0||60S acidic ribosomal protein Rpp0
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 312
Score = 26.6 bits (56), Expect = 1.7
Identities = 14/66 (21%), Positives = 33/66 (50%)
Frame = +1
Query: 163 HFGALISDFFEKHKLEIHELTNIVTEMFKDITRLIVAQLKELPGKITQVYEELVKLINNM 342
+F L S F + + L + + N+ ++ + + + + + GK T + + +IN+M
Sbjct: 11 YFEKLRSLFEKYNSLFVVNIDNVSSQQMHTVRKQLRGTAELIMGKNTMIRRAMRGIINDM 70
Query: 343 PIIEAI 360
P +E +
Sbjct: 71 PELERL 76
>SPAC144.15c |cog1||Golgi transport complex subunit Cog1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 701
Score = 26.6 bits (56), Expect = 1.7
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +1
Query: 31 TFTETSNKILE-MYKKTLEPQLKQLYETLGKMLQ-EYLESFIDIVAHFGALISDFFEK 198
T T +ILE + + EPQ K+ YE +LQ ++ S +I+ G ++ EK
Sbjct: 320 TSLTTLYQILEGLLSELSEPQFKEFYELWNSILQNHFIISSRNIIDSLGLYVNKIKEK 377
Score = 25.8 bits (54), Expect = 3.0
Identities = 16/83 (19%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +1
Query: 124 LQEYLESFIDIVAHFGALISDFFEK-HKLEIHELTNIVTEMFKDITRLIVAQLKELPGKI 300
+ + + F +A F ++ + + KL+ L+ + ++ + L L +
Sbjct: 415 MDDGFQRFWQSLASFDMVLDESLQVLKKLQTLHLSFTLGDIIPNYLTLADYLLNFVKTSF 474
Query: 301 TQVYEELVKLINNMPIIEAIKEK 369
Q+YE + +NN+ ++E+ EK
Sbjct: 475 AQIYELVCSFVNNVAVMESSSEK 497
>SPAP8A3.07c |||phospho-2-dehydro-3-deoxyheptonate aldolase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 372
Score = 26.2 bits (55), Expect = 2.3
Identities = 21/92 (22%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Frame = +1
Query: 52 KILEMYKKTLEPQLKQLYETLGKMLQEYLESFIDIVAHFGALISDFFEKHKLEIHELTNI 231
K+ Y K L+P+ +L + L +++ YLE + G L++D I++ +
Sbjct: 79 KLAMDYAKLLKPKADELQDALCVVMRCYLEKPRTTIGWKG-LVNDPNLDGSFAINKGIRM 137
Query: 232 VTEMFKDITRLIVAQLKELPGKIT-QVYEELV 324
+M+ D+T + E+ I+ Q + +L+
Sbjct: 138 ARQMYCDVTNFGIPLASEMLDNISPQFFADLL 169
>SPAC13C5.07 |rad32|mre11|Rad32 nuclease|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 649
Score = 26.2 bits (55), Expect = 2.3
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +1
Query: 169 GALISDFFEKHKLE-IHELTNIVTEMFKDITRLIVAQLKELPGKITQVYEELVKLINNMP 345
G + +F EK + I E + T++ K I L+ ++ E + +E+ +IN++P
Sbjct: 461 GEAVVNFVEKDDRDAIKEC--VETQLNKQINLLVKKRVTE-----ENLEQEISSIINDLP 513
Query: 346 IIEAIKEKWNEGLPKD 393
I K K E LP++
Sbjct: 514 KISTTKRKDYEELPEE 529
>SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 26.2 bits (55), Expect = 2.3
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 40 ETSNKILEMYKKTLEPQLKQLYETLGKM 123
E K+ E Y+ +P+L++ Y+ LGK+
Sbjct: 50 EKFQKLAEAYQVLSDPKLREKYDKLGKV 77
>SPBC36B7.08c |||nucleosome assembly protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 244
Score = 25.8 bits (54), Expect = 3.0
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Frame = +1
Query: 97 QLYETLGKMLQEYLESFIDIVAHFGALISDFFEKHKLEIHELTN---IVTEMFKD-ITRL 264
Q +E L + QE+ ++ I+I+ L FE+ + + + N +V E D I++
Sbjct: 5 QAFENLANLEQEFGKAEIEILKKQNELFQPLFEQRRDILKTINNFWVVVLEAAGDEISQY 64
Query: 265 IVAQLKELPGKITQVYEE 318
I + L K+ +Y E
Sbjct: 65 ITPEDSVLLEKLENIYVE 82
>SPCC1393.13 |||DUF89 family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 442
Score = 25.8 bits (54), Expect = 3.0
Identities = 10/40 (25%), Positives = 26/40 (65%)
Frame = +1
Query: 223 TNIVTEMFKDITRLIVAQLKELPGKITQVYEELVKLINNM 342
TN++ E+ ++I++ + A + + +TQ +E++ L+N +
Sbjct: 35 TNVIDEVSRNISKALEAGMSDKAAYVTQ-GKEIISLLNQL 73
>SPBC15D4.07c |atg9|apg9|autophagy associated protein Atg9
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 702
Score = 25.8 bits (54), Expect = 3.0
Identities = 11/38 (28%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +1
Query: 289 PGKITQVYEEL--VKLINNMPIIEAIKEKWNEGLPKDQ 396
P + + Y++L ++ NN+P + + E W E L D+
Sbjct: 5 PAQNKKQYDDLADIEAQNNVPNTQEVLEAWQESLDSDE 42
>SPAC26A3.09c |rga2||GTPase activating protein
Rga2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1275
Score = 25.4 bits (53), Expect = 4.0
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +1
Query: 205 LEIHELTNIVTEMFKDITRLIVAQLKE-LPGKITQVYEELVKLINNMPIIEAIKEKWNEG 381
L ++E NI T+ ++V + E L + E + +L + I+ +KE++NEG
Sbjct: 1065 LPLNEAVNISTQFNDSGLPIVVYRCIEYLESCRAEKEEGIYRLSGSASTIKHLKEQFNEG 1124
Query: 382 LPKDQL 399
+ D L
Sbjct: 1125 VDYDLL 1130
>SPAC823.12 |||zinc finger protein Pep5/Vps11 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 906
Score = 25.4 bits (53), Expect = 4.0
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = -1
Query: 419 RGL*NAISWSFGKPSFHFSLMASMIGMLFISFTSSSYT 306
RG+ N+ S + G+P + + +LFI+ T+ +Y+
Sbjct: 159 RGIKNSYSHNLGEPITGLTYLDDQSSVLFIATTNKTYS 196
>SPBC776.10c |cog6||Golgi transport complex peripheral subunit Cog6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 675
Score = 25.4 bits (53), Expect = 4.0
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +1
Query: 196 KHKLEIHELTNIVTEMFKDI---TRLIVAQLKELPGKITQVYEELVKLINNMPIIEAIKE 366
K K E + E+F D+ I+ +L EL + V +L+K+ N+ I++ K
Sbjct: 52 KFKNEREARKQLPFEVFSDLIWTNGSIIKELSELSSQTLSVQSQLLKVKNS---IDSYKN 108
Query: 367 KWNEGLPKDQLI 402
+W++ Q++
Sbjct: 109 EWSKKTNDAQIL 120
>SPAC18B11.06 |||U3 snoRNP-associated protein Lcp5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 327
Score = 25.0 bits (52), Expect = 5.2
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = +1
Query: 259 RLIVAQLKELPGKITQVYEELVKLINNMPIIEAIKEKWNEGLPK---DQLIAFYNPRYAT 429
R+ + +++ L +I ++L++ I +IKE N G K D L Y P +
Sbjct: 70 RIEIEKIRPLENRIQYSVDKLLRAAGRKEEIGSIKEPENNGNDKDSQDSLKLHYKPNLSE 129
Query: 430 F 432
F
Sbjct: 130 F 130
>SPBC365.02c |cox10||protoheme IX
farnesyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 387
Score = 25.0 bits (52), Expect = 5.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -1
Query: 389 FGKPSFHFSLMASMIGMLFISFTSSSYT*VIFPGSSFS 276
+ KPS L + +L + T SSY +PG SF+
Sbjct: 81 YPKPSAFLELGKPRLTVLVVLSTMSSYALAPYPGLSFN 118
>SPBPJ4664.06 |gpt1||UDP-glucose-glycoprotein glucosyltransferase
Gpt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1448
Score = 24.2 bits (50), Expect = 9.1
Identities = 22/94 (23%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Frame = +1
Query: 10 IVDQIIKTFTETSNKIL-EMYKKTLEP-QLKQLYETLGKMLQEYLESFIDIVAHFGA-LI 180
++D I++ + T N ++ K +++ +K++ E +G + E + A + L+
Sbjct: 629 LLDFILRDASLTRNPLVYPSAKSSIKSIDIKRVLENVGSLNHEDILLIGSSNAKYSFWLV 688
Query: 181 SDFFEKHKLEIHELTNIVTEMFKDITRLIVAQLK 282
+DF EK LEI L + KD +++ + K
Sbjct: 689 ADFNEKEGLEILSLLADLLSENKDANLMLIQEGK 722
>SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1828
Score = 24.2 bits (50), Expect = 9.1
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -1
Query: 137 RYSCSILPKVSYSCFS 90
R +CSI K+ +SCFS
Sbjct: 1007 RQACSISEKMPFSCFS 1022
>SPAC16A10.07c |taz1|myb1, myb|human TRF ortholog
Taz1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 663
Score = 24.2 bits (50), Expect = 9.1
Identities = 17/72 (23%), Positives = 28/72 (38%)
Frame = +1
Query: 103 YETLGKMLQEYLESFIDIVAHFGALISDFFEKHKLEIHELTNIVTEMFKDITRLIVAQLK 282
Y T K E ++++ G S KLE L KD RLI A+
Sbjct: 555 YRTRRKWTDEEENELYEMISQHGCCWSKIIHIQKLENGPLKTFGPTQIKDKARLIKARFM 614
Query: 283 ELPGKITQVYEE 318
+ ++ ++Y +
Sbjct: 615 K-QNRLQELYSK 625
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 24.2 bits (50), Expect = 9.1
Identities = 8/30 (26%), Positives = 18/30 (60%)
Frame = +1
Query: 10 IVDQIIKTFTETSNKILEMYKKTLEPQLKQ 99
I D + F+E ++ + + +KK E ++K+
Sbjct: 443 IFDSFVNKFSELNDSLDQFFKKKYEEEIKE 472
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,665,126
Number of Sequences: 5004
Number of extensions: 29320
Number of successful extensions: 108
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 108
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 162176800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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