Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_L24
(443 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0550 - 18481095-18481496,18482623-18483898,18485769-18485821 32 0.24
09_04_0548 - 18469636-18470037,18471164-18472705,18474052-184744... 32 0.24
09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540 32 0.24
01_06_0916 + 32950575-32950656,32952061-32952272,32952408-329524... 32 0.24
08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201 30 0.73
09_02_0196 - 5678744-5679222,5679304-5679937 29 1.7
11_06_0669 - 26084906-26087350 29 2.2
08_01_0841 + 8223768-8223871,8227749-8228745,8228779-8228828,822... 29 2.2
01_06_0639 + 30772804-30772904,30773386-30775675 29 2.2
08_01_0890 - 8761787-8761910,8761987-8762063,8762163-8762310,876... 28 2.9
02_05_0205 + 26755024-26756217 28 2.9
11_03_0127 - 10408628-10409106,10409188-10409821 28 3.9
04_01_0042 + 473912-474058,474208-474349,474442-476264 28 3.9
11_01_0782 + 6543906-6544702,6545717-6547850 27 5.1
03_05_0480 + 24740567-24741559 27 5.1
02_01_0361 - 2600398-2602780,2602815-2603479,2603553-2603981 27 5.1
02_01_0353 + 2545982-2549833 27 5.1
06_03_0733 + 23976835-23976906,23977076-23977279,23977388-239776... 27 6.8
03_05_1051 + 29978655-29979875 27 6.8
03_02_0552 + 9416362-9417790,9417827-9417936,9418032-9418484 27 6.8
02_02_0157 - 7280335-7280541,7280656-7280762,7280918-7281097,728... 27 6.8
06_01_0293 - 2139421-2139600,2139716-2140471,2140830-2140935,214... 27 9.0
05_03_0195 - 9560885-9561435,9561553-9561639,9562199-9563225 27 9.0
>09_04_0550 - 18481095-18481496,18482623-18483898,18485769-18485821
Length = 576
Score = 31.9 bits (69), Expect = 0.24
Identities = 29/115 (25%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
Frame = +1
Query: 49 NKILEMYKKTLEPQLKQLYETLGKMLQEYLESFIDIVAHFGALISDFFEKHKLEIHELTN 228
NKIL++ +K L + +L+ + + ++Y F + + L ++ +I EL
Sbjct: 125 NKILKVIRKNLVKKCVELFFEIAENKEDY-NKFYEAFSKNLKLGIHEDSTNRTKIAELLR 183
Query: 229 I-VTEMFKDITRL--IVAQLKELPGKITQVYEELVKLINNMPIIEAIKEKWNEGL 384
T+ ++T L V ++KE +I + E K + N P +E +K+K E L
Sbjct: 184 YHSTKSGDELTSLKDYVTRMKEGQSEIYYITGESKKAVENSPFLEKLKKKGYEVL 238
>09_04_0548 -
18469636-18470037,18471164-18472705,18474052-18474474,
18474874-18474999
Length = 830
Score = 31.9 bits (69), Expect = 0.24
Identities = 29/115 (25%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
Frame = +1
Query: 49 NKILEMYKKTLEPQLKQLYETLGKMLQEYLESFIDIVAHFGALISDFFEKHKLEIHELTN 228
NKIL++ +K L + +L+ + + ++Y F + + L ++ +I EL
Sbjct: 379 NKILKVIRKNLVKKCVELFFEIAENKEDY-NKFYEAFSKNLKLGIHEDSTNRTKIAELLR 437
Query: 229 I-VTEMFKDITRL--IVAQLKELPGKITQVYEELVKLINNMPIIEAIKEKWNEGL 384
T+ ++T L V ++KE +I + E K + N P +E +K+K E L
Sbjct: 438 YHSTKSGDELTSLKDYVTRMKEGQSEIYYITGESKKAVENSPFLEKLKKKGYEVL 492
>09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540
Length = 699
Score = 31.9 bits (69), Expect = 0.24
Identities = 29/115 (25%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
Frame = +1
Query: 49 NKILEMYKKTLEPQLKQLYETLGKMLQEYLESFIDIVAHFGALISDFFEKHKLEIHELTN 228
NKIL++ +K L + +L+ + + ++Y F + + L ++ +I EL
Sbjct: 379 NKILKVIRKNLVKKCVELFFEIAENKEDY-NKFYEAFSKNLKLGIHEDSTNRTKIAELLR 437
Query: 229 I-VTEMFKDITRL--IVAQLKELPGKITQVYEELVKLINNMPIIEAIKEKWNEGL 384
T+ ++T L V ++KE +I + E K + N P +E +K+K E L
Sbjct: 438 YHSTKSGDELTSLKDYVTRMKEGQSEIYYITGESKKAVENSPFLEKLKKKGYEVL 492
>01_06_0916 +
32950575-32950656,32952061-32952272,32952408-32952448,
32952916-32952959,32953259-32953561,32954145-32954302,
32954849-32954965,32955562-32955747,32955872-32956031,
32956079-32956151,32958613-32958889,32959024-32959099,
32960653-32960720,32961270-32961361,32961505-32961578,
32961777-32961820,32962155-32962206,32962585-32962704,
32962777-32962889,32963023-32963110,32963492-32963577,
32964172-32964258,32964491-32964594,32964996-32965098,
32965250-32965345,32965456-32965645,32965777-32965838,
32966014-32966118,32966782-32966983,32967092-32967300,
32968510-32968673,32968799-32968850,32968935-32969021,
32969319-32969441,32969567-32969605,32969606-32969860
Length = 1447
Score = 31.9 bits (69), Expect = 0.24
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Frame = +1
Query: 169 GALISDFFEKHKLEIHELTNIVTEMFKDITRLIVAQLKELPGKITQVYEE--LVKLINNM 342
G +IS+ EKHKLE+ LT + F+ + ++A L+ L T + + L ++ +
Sbjct: 23 GGVISEIREKHKLELENLT-LTKHPFRTLRFFMLAMLQYLKRLATYILSKGALFVVLIVL 81
Query: 343 PIIEAIKEKWNEGLPKDQLIAFYNPRYATF 432
+ I +GL K + F N YA F
Sbjct: 82 VLAPGILLAVTDGLHKKHVQEFLN--YARF 109
Score = 27.1 bits (57), Expect = 6.8
Identities = 13/54 (24%), Positives = 33/54 (61%)
Frame = +1
Query: 124 LQEYLESFIDIVAHFGALISDFFEKHKLEIHELTNIVTEMFKDITRLIVAQLKE 285
L+ ++S + +H A I +FF+ + +IHEL++ + +++ L+ ++L++
Sbjct: 1271 LEVVIQSTVKDPSHLDARIDEFFKMFESKIHELSD--KDFKRNVKSLVDSKLEK 1322
>08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201
Length = 699
Score = 30.3 bits (65), Expect = 0.73
Identities = 29/115 (25%), Positives = 54/115 (46%), Gaps = 3/115 (2%)
Frame = +1
Query: 49 NKILEMYKKTLEPQLKQLYETLGKMLQEYLESFIDIVAHFGALISDFFEKHKLEIHELTN 228
NKIL++ +K L + +L+ + + ++Y F + + L ++ +I EL
Sbjct: 379 NKILKVIRKNLVKKCVELFFEIAENKEDY-NKFYEAFSKNLKLGIHEDSTNRNKIAELLR 437
Query: 229 I-VTEMFKDITRL--IVAQLKELPGKITQVYEELVKLINNMPIIEAIKEKWNEGL 384
T+ ++T L V ++KE I + E K + N P +E +K+K E L
Sbjct: 438 YHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVL 492
>09_02_0196 - 5678744-5679222,5679304-5679937
Length = 370
Score = 29.1 bits (62), Expect = 1.7
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +1
Query: 148 IDIVAHFGALISDFFEKHKLEIHELTNIVTEMFKDITRLIVAQLK 282
+ +++ + + DF+E+ LEI + V E+ ++T L V QL+
Sbjct: 118 VTLLSRWAEAVDDFYEEALLEIDDQQRRVGELESEVTDLTVHQLQ 162
>11_06_0669 - 26084906-26087350
Length = 814
Score = 28.7 bits (61), Expect = 2.2
Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +1
Query: 100 LYETLGKMLQEYLESFIDIVAHFGALISDFFEKHKLEIHELTNI-VTEMFKDITRLIVAQ 276
L ET+G + Y + V A S F +H+LE HEL N+ V E F IT V
Sbjct: 305 LNETMGALWWSY-QHLDQQVRRCFAYCSIFPRRHRLERHELINLWVAEGF--ITTTEVGL 361
Query: 277 LKELPGKITQVYEELV 324
E G+ + +EELV
Sbjct: 362 EMEAVGR--KYFEELV 375
>08_01_0841 +
8223768-8223871,8227749-8228745,8228779-8228828,
8228896-8230396
Length = 883
Score = 28.7 bits (61), Expect = 2.2
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +1
Query: 241 MFKDITRLIVAQLKELPGKITQVYEELVKLINNMPI-IEAIKEKW-NEGLPKDQ 396
M KDI ++++ + K+LP + + L N I +E I ++W EGL +D+
Sbjct: 388 MLKDIWKVMIQRYKDLPPYLKPCFLYLSIFPENSDINVETIIDRWLAEGLVRDR 441
>01_06_0639 + 30772804-30772904,30773386-30775675
Length = 796
Score = 28.7 bits (61), Expect = 2.2
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 7/63 (11%)
Frame = +1
Query: 37 TETSNKILEMYKK--TLEPQLKQLYETLGKMLQEYLESFIDIVAHF-----GALISDFFE 195
T+ +NKILEMY K ++E K+L+ T+ Q L S+ I++ F G +DFF+
Sbjct: 471 TDINNKILEMYAKCGSME-DAKKLFNTIA---QRNLASWNTIISGFVYNGLGDEATDFFD 526
Query: 196 KHK 204
+ K
Sbjct: 527 QFK 529
>08_01_0890 -
8761787-8761910,8761987-8762063,8762163-8762310,
8762430-8762490,8764714-8764938,8764990-8765170
Length = 271
Score = 28.3 bits (60), Expect = 2.9
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +1
Query: 34 FTETSNKILEMYKKTLEPQLKQLYETLGKMLQEYLESFIDIVAHFGALISD-FFEKHKLE 210
+TE KIL Y K + LK + +GK E F+D G L + F E+ +
Sbjct: 66 YTEVQEKILARYGKVFDWSLKA--KMMGKKATESARIFVDECGLDGLLTPEQFLEERESM 123
Query: 211 IHEL 222
+ EL
Sbjct: 124 LQEL 127
>02_05_0205 + 26755024-26756217
Length = 397
Score = 28.3 bits (60), Expect = 2.9
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +1
Query: 157 VAHFGALISDFFEKHKLEIHELTNIVTEMFKDITRLIVAQLK 282
++ + + DF+E+ LEI++ V E+ ++T L V QL+
Sbjct: 121 LSRWAEAVDDFYEEALLEINDQQRRVGELETEVTDLTVQQLQ 162
>11_03_0127 - 10408628-10409106,10409188-10409821
Length = 370
Score = 27.9 bits (59), Expect = 3.9
Identities = 12/45 (26%), Positives = 26/45 (57%)
Frame = +1
Query: 148 IDIVAHFGALISDFFEKHKLEIHELTNIVTEMFKDITRLIVAQLK 282
+ +++ + + DF+E+ LEI + + E+ ++T L V QL+
Sbjct: 118 VTLLSRWAEAVDDFYEEALLEIDDQQRHMGELETEVTDLTVQQLQ 162
>04_01_0042 + 473912-474058,474208-474349,474442-476264
Length = 703
Score = 27.9 bits (59), Expect = 3.9
Identities = 24/114 (21%), Positives = 51/114 (44%), Gaps = 2/114 (1%)
Frame = +1
Query: 49 NKILEMYKKTLEPQLKQLYETLGKMLQEYLESFIDIVAHFGALISDFFEKHKLEIHELTN 228
NKIL++ +K L + +++ + ++Y + + + I + + L
Sbjct: 384 NKILKVIRKNLVKKCIEMFFEIADNKEDYAKFYEAFSKNLKLGIHEDSQNRGKLADLLRY 443
Query: 229 IVTEMFKDITRL--IVAQLKELPGKITQVYEELVKLINNMPIIEAIKEKWNEGL 384
T+ ++T L V ++KE ++ + E K + N P +E +K+K E L
Sbjct: 444 HSTKSGNELTSLKDYVTRMKEGQKEVYYITGESRKAVENSPFLEKLKKKGYEVL 497
>11_01_0782 + 6543906-6544702,6545717-6547850
Length = 976
Score = 27.5 bits (58), Expect = 5.1
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = +1
Query: 205 LEIHELTNIVTEMFKDITRLIVAQLKELPGKITQVYEELVKL 330
L++ E T++ + + L + + L GK+T++ EE+ KL
Sbjct: 566 LDLEECTDLDDDHLIQVCNLFLLRYLSLGGKVTKLPEEITKL 607
>03_05_0480 + 24740567-24741559
Length = 330
Score = 27.5 bits (58), Expect = 5.1
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +1
Query: 157 VAHFGALISDFFEKHKLEIHELTNIVTEMFKDITRLIVAQLK 282
++ + + DF+E+ LEI + V E+ ++T L V QL+
Sbjct: 54 LSRWAEAVDDFYEEALLEIDDQQRRVGELETEVTDLTVQQLQ 95
>02_01_0361 - 2600398-2602780,2602815-2603479,2603553-2603981
Length = 1158
Score = 27.5 bits (58), Expect = 5.1
Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +1
Query: 58 LEMYKKTLEPQLKQLYETLGKMLQEYLESFIDIVAHFGALISDFFEKHKLE--IHELTNI 231
+E + L+P K + GK+L +L++ I+ AL + ++ K ++ I E +
Sbjct: 574 IESFDTVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYASYYTKEVMQILIREFQSP 633
Query: 232 VTEMFKDITRLI 267
EM K + +++
Sbjct: 634 DEEMKKIVLKVV 645
>02_01_0353 + 2545982-2549833
Length = 1283
Score = 27.5 bits (58), Expect = 5.1
Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +1
Query: 58 LEMYKKTLEPQLKQLYETLGKMLQEYLESFIDIVAHFGALISDFFEKHKLE--IHELTNI 231
+E + L+P K + GK+L +L++ I+ AL + ++ K ++ I E +
Sbjct: 699 IESFDTVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYASYYTKEVMQILIREFQSP 758
Query: 232 VTEMFKDITRLI 267
EM K + +++
Sbjct: 759 DEEMKKIVLKVV 770
>06_03_0733 +
23976835-23976906,23977076-23977279,23977388-23977645,
23978002-23978217,23978324-23978479,23978556-23978867,
23978957-23979044,23979224-23979372,23979465-23979755
Length = 581
Score = 27.1 bits (57), Expect = 6.8
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +1
Query: 136 LESFIDIVAHFGALISDFFEKHKLEIHELTNIVTEMFKDITRLIVAQLKEL 288
+ S +D V GAL D E+ +LE+ L + KDI +L+++
Sbjct: 282 ISSTLDEVTAPGALDIDLIEQAELEVERLDQLKASRMKDIAFKRQTELEDI 332
>03_05_1051 + 29978655-29979875
Length = 406
Score = 27.1 bits (57), Expect = 6.8
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = +1
Query: 262 LIVAQLKELPGKITQVYEELVKLINNMPIIEAIKEKWNEGLPKDQLIAFYNPR 420
L +A+ + LP + ++ + L++ + + I+ EGLP+ L AF+ R
Sbjct: 109 LSLARARALPA-LFRLLRDHAPLVSTAALTDVIRALGEEGLPRHALAAFHRGR 160
>03_02_0552 + 9416362-9417790,9417827-9417936,9418032-9418484
Length = 663
Score = 27.1 bits (57), Expect = 6.8
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +1
Query: 49 NKILEMYKKTLEPQLKQLYETL 114
N+ILEMYKK L P K TL
Sbjct: 593 NEILEMYKKYLNPDFKWTNFTL 614
>02_02_0157 - 7280335-7280541,7280656-7280762,7280918-7281097,
7281182-7281277,7281378-7281459,7281553-7283037,
7283376-7283450,7283521-7283598,7283708-7283791,
7283885-7283965,7284073-7284291,7284398-7284648,
7284748-7284796
Length = 997
Score = 27.1 bits (57), Expect = 6.8
Identities = 24/123 (19%), Positives = 56/123 (45%)
Frame = +1
Query: 28 KTFTETSNKILEMYKKTLEPQLKQLYETLGKMLQEYLESFIDIVAHFGALISDFFEKHKL 207
K E ++ LE + +L+Q E + ML + + I++ I F++K ++
Sbjct: 702 KRLHEAHSQQLETKAAQVSKELEQRIEEVKLMLDDSTKRRIELEELSETRIQ-FWKKKEV 760
Query: 208 EIHELTNIVTEMFKDITRLIVAQLKELPGKITQVYEELVKLINNMPIIEAIKEKWNEGLP 387
I + ++ + +D+ V+ E+ + EEL L ++ ++ EK++ L
Sbjct: 761 VIDQFVSLQVQNVQDLKLSSVSVRHEILNCQNKWSEELAGLGKSLKVVTNTAEKYHGALA 820
Query: 388 KDQ 396
+++
Sbjct: 821 ENR 823
>06_01_0293 -
2139421-2139600,2139716-2140471,2140830-2140935,
2140999-2141249,2141342-2141443,2141557-2141876,
2142350-2142546,2143668-2143786,2143876-2143997,
2144877-2145081
Length = 785
Score = 26.6 bits (56), Expect = 9.0
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +1
Query: 37 TETSNKILEMYKKTLEPQLKQLYETLGKMLQEYLESFIDIVAHFGALISDFFEKHKLE 210
T + K+L + QL+Q E LGK+ +L + G L+ +F E L+
Sbjct: 453 TVAAVKVLNSPEGCGTQQLQQELEVLGKIRHPHLLLMLGACPEHGCLVYEFMENGSLD 510
>05_03_0195 - 9560885-9561435,9561553-9561639,9562199-9563225
Length = 554
Score = 26.6 bits (56), Expect = 9.0
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 88 QLKQLYETLGKMLQEYLESFIDIVAHF 168
Q+ +Y+ L L YL+S +DI+A+F
Sbjct: 393 QVAGVYKCLDGSLNRYLDSCLDIIANF 419
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,975,192
Number of Sequences: 37544
Number of extensions: 160457
Number of successful extensions: 576
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 576
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 847740284
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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