Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_L23
         (540 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011091-1|AAR82757.1| 1199|Drosophila melanogaster RE50384p pro...    30   2.3  
AE014297-4552|AAN14221.1| 1109|Drosophila melanogaster CG31028-P...    30   2.3  
AE014297-4551|AAF57015.4| 1097|Drosophila melanogaster CG31028-P...    30   2.3  

>BT011091-1|AAR82757.1| 1199|Drosophila melanogaster RE50384p
           protein.
          Length = 1199

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 11/49 (22%), Positives = 27/49 (55%)
 Frame = -1

Query: 447 AAGQRLQRKTIAGHYRPAGISRDLRAKYDAIPCGSEIKSKFKTKYSINN 301
           A G+RL    + GH+R   ++++  A  D++     ++   +++Y ++N
Sbjct: 710 ARGERLACSAVIGHFRRKVVAKEWYANGDSLTVSGRVEITQQSEYDVSN 758


>AE014297-4552|AAN14221.1| 1109|Drosophila melanogaster CG31028-PB,
           isoform B protein.
          Length = 1109

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 11/49 (22%), Positives = 27/49 (55%)
 Frame = -1

Query: 447 AAGQRLQRKTIAGHYRPAGISRDLRAKYDAIPCGSEIKSKFKTKYSINN 301
           A G+RL    + GH+R   ++++  A  D++     ++   +++Y ++N
Sbjct: 677 ARGERLACSAVIGHFRRKVVAKEWYANGDSLTVSGRVEITQQSEYDVSN 725


>AE014297-4551|AAF57015.4| 1097|Drosophila melanogaster CG31028-PA,
           isoform A protein.
          Length = 1097

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 11/49 (22%), Positives = 27/49 (55%)
 Frame = -1

Query: 447 AAGQRLQRKTIAGHYRPAGISRDLRAKYDAIPCGSEIKSKFKTKYSINN 301
           A G+RL    + GH+R   ++++  A  D++     ++   +++Y ++N
Sbjct: 665 ARGERLACSAVIGHFRRKVVAKEWYANGDSLTVSGRVEITQQSEYDVSN 713


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,962,842
Number of Sequences: 53049
Number of extensions: 461316
Number of successful extensions: 869
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 869
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2053700352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)