Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_L22
(499 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 56 1e-08
Z70035-8|CAA93868.2| 446|Caenorhabditis elegans Hypothetical pr... 55 2e-08
Z70035-7|CAA93867.1| 369|Caenorhabditis elegans Hypothetical pr... 53 1e-07
Z70035-6|CAA93866.1| 444|Caenorhabditis elegans Hypothetical pr... 53 1e-07
AF026152-1|AAB81847.1| 117|Caenorhabditis elegans chitinase pro... 52 2e-07
Z66524-7|CAA91419.2| 626|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z70035-9|CAA93870.2| 450|Caenorhabditis elegans Hypothetical pr... 42 2e-04
Z70035-12|CAB76726.1| 150|Caenorhabditis elegans Hypothetical p... 42 3e-04
Z54342-15|CAK55172.1| 465|Caenorhabditis elegans Hypothetical p... 41 4e-04
Z54342-5|CAA91147.1| 457|Caenorhabditis elegans Hypothetical pr... 41 6e-04
Z70035-13|CAA93874.1| 432|Caenorhabditis elegans Hypothetical p... 40 0.001
Z54342-7|CAA91149.1| 460|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z47745-6|CAA87667.1| 432|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z47745-4|CAA87665.2| 445|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z49913-6|CAA90145.2| 460|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z47745-2|CAA87664.1| 407|Caenorhabditis elegans Hypothetical pr... 38 0.004
Z54342-4|CAA91150.1| 447|Caenorhabditis elegans Hypothetical pr... 36 0.016
Z70035-3|CAA93863.1| 435|Caenorhabditis elegans Hypothetical pr... 36 0.022
U70858-7|AAB09177.1| 1484|Caenorhabditis elegans Hypothetical pr... 36 0.022
AF016419-9|AAG24054.1| 2025|Caenorhabditis elegans Hypothetical ... 34 0.050
Z70035-2|CAA93862.1| 440|Caenorhabditis elegans Hypothetical pr... 34 0.066
Z54342-8|CAA91152.1| 459|Caenorhabditis elegans Hypothetical pr... 33 0.12
U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical pr... 31 0.46
U97407-3|AAM15558.1| 1069|Caenorhabditis elegans Nompa homolog (... 30 1.1
U97407-2|AAB52479.2| 1065|Caenorhabditis elegans Nompa homolog (... 30 1.1
U61950-2|AAC24286.1| 266|Caenorhabditis elegans Hypothetical pr... 29 1.9
AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical ... 29 1.9
AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical ... 29 1.9
Z81460-3|CAB03829.1| 1228|Caenorhabditis elegans Hypothetical pr... 29 2.5
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 28 3.3
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 28 3.3
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 28 3.3
Z70035-4|CAA93864.2| 410|Caenorhabditis elegans Hypothetical pr... 28 4.3
AL110490-9|CAB54453.2| 607|Caenorhabditis elegans Hypothetical ... 27 7.6
AF039650-1|AAC14022.3| 607|Caenorhabditis elegans acetylcholine... 27 7.6
Z92781-3|CAB07182.1| 326|Caenorhabditis elegans Hypothetical pr... 27 10.0
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 56.0 bits (129), Expect = 1e-08
Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 1/119 (0%)
Frame = +2
Query: 5 EAQARMLPTDLEPALSFCTHLLYKSAGIQADTYKMVSLNENLDIDRA-HANYRAITNLKR 181
+ +A+ +P D P L CTH+L+ + AD +L D A YR + LK
Sbjct: 67 QGRAKFVPEDYTPGL--CTHILFAFGWMNADYTVRAYDPADLPNDWAGEGMYRRVNKLKV 124
Query: 182 QFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLP 358
QL+ L+ GG + + + S +R F +SA+ +GFDGID+ W+ P
Sbjct: 125 TDTQLKTLLSFGGW--SFGTALFQGMAASSASRKVFIDSAITFVRTWGFDGIDIDWEYP 181
>Z70035-8|CAA93868.2| 446|Caenorhabditis elegans Hypothetical
protein R09D1.8 protein.
Length = 446
Score = 55.2 bits (127), Expect = 2e-08
Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 5/103 (4%)
Frame = +2
Query: 125 NLDIDRAHANYRAITNL----KRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFT 292
+L ID A R TNL K+Q PQ++V +++GG+D++ + + +L SP + F
Sbjct: 122 HLQIDGDLAKNR-FTNLIEIAKQQTPQVKVMISIGGNDNSNN---FKPVLSSPDRKKLFI 177
Query: 293 NSALLLAEQYGFDGIDLSWQLPKRKPKKIRSS-IGSFWHSIKK 418
NS + + Y DG+DL W+ P + K I S I +S+++
Sbjct: 178 NSTVSFLQTYDIDGVDLYWKWPGKTSKDIYSQFINDLRYSLQR 220
>Z70035-7|CAA93867.1| 369|Caenorhabditis elegans Hypothetical
protein R09D1.7 protein.
Length = 369
Score = 53.2 bits (122), Expect = 1e-07
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Frame = +2
Query: 176 KRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQL 355
K+Q P ++V +++GGDD++ + K +L SP R F N+ + YG DGIDL W+
Sbjct: 65 KQQTPPVKVMISIGGDDNSNNFYK---VLNSPNRRKVFLNATTSFLQIYGIDGIDLFWKW 121
Query: 356 PKRKPKKIRSS-IGSFWHSIKK 418
P K + + I H++++
Sbjct: 122 PGGASKTLYTKFISDLRHNLQQ 143
>Z70035-6|CAA93866.1| 444|Caenorhabditis elegans Hypothetical
protein R09D1.6 protein.
Length = 444
Score = 53.2 bits (122), Expect = 1e-07
Identities = 34/103 (33%), Positives = 56/103 (54%), Gaps = 5/103 (4%)
Frame = +2
Query: 125 NLDIDRAHANYRAITNL----KRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFT 292
+L ID A R TNL K+Q PQ++V +++GG+D++ + + L SP + F
Sbjct: 120 HLQIDGDLAKNR-FTNLIEIAKQQTPQVKVMISIGGNDNSNN---FKPGLSSPDRKKLFI 175
Query: 293 NSALLLAEQYGFDGIDLSWQLPKRKPKKIRSS-IGSFWHSIKK 418
NS + + Y DG+DL W+ P + K I S I +S+++
Sbjct: 176 NSTVSFLQTYDIDGVDLYWKWPGKTSKDIYSQFINDLRYSLQR 218
>AF026152-1|AAB81847.1| 117|Caenorhabditis elegans chitinase
protein.
Length = 117
Score = 52.0 bits (119), Expect = 2e-07
Identities = 36/116 (31%), Positives = 53/116 (45%), Gaps = 1/116 (0%)
Frame = +2
Query: 5 EAQARMLPTDLEPALSFCTHLLYKSAGIQADTYKMVSLNENLDIDRA-HANYRAITNLKR 181
+ +A+ +P D P L CTH+L+ + AD +L D A YR + LK
Sbjct: 6 QGRAKFVPEDYTPGL--CTHILFAFGWMNADYTVRAYDPADLPNDWAGEGMYRRVNKLKV 63
Query: 182 QFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSW 349
QL+ L+ GG + + + S +R F +SA +GFDGIDL W
Sbjct: 64 TDTQLKTLLSFGGC--SFGTALFQGMAASSASRKVFIDSATTSVRTWGFDGIDLDW 117
>Z66524-7|CAA91419.2| 626|Caenorhabditis elegans Hypothetical
protein T13H5.3 protein.
Length = 626
Score = 45.6 bits (103), Expect = 2e-05
Identities = 21/77 (27%), Positives = 41/77 (53%)
Frame = +2
Query: 128 LDIDRAHANYRAITNLKRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALL 307
L+ D A A + + + P L++ VGG E+ Q +++L R+ ++ +
Sbjct: 72 LEGDAAKARLEHVKEVASRHPDLKLLYAVGG---WENSQYFSVLTADHSRRSILISNFVK 128
Query: 308 LAEQYGFDGIDLSWQLP 358
+ ++YGFDG+D+ W+ P
Sbjct: 129 VIKEYGFDGVDIDWEYP 145
>Z70035-9|CAA93870.2| 450|Caenorhabditis elegans Hypothetical
protein R09D1.10 protein.
Length = 450
Score = 42.3 bits (95), Expect = 2e-04
Identities = 17/62 (27%), Positives = 38/62 (61%)
Frame = +2
Query: 188 PQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLPKRK 367
P+L++ +++GG ++++ + ++ SP + F NS + ++Y DG+DL W+ P+ +
Sbjct: 142 PKLKMLISIGGPANSDN---FLPVISSPDRKKIFINSIVSFLKKYDIDGVDLFWKWPRLE 198
Query: 368 PK 373
K
Sbjct: 199 DK 200
>Z70035-12|CAB76726.1| 150|Caenorhabditis elegans Hypothetical
protein R09D1.14 protein.
Length = 150
Score = 41.5 bits (93), Expect = 3e-04
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Frame = +2
Query: 110 VSLNENLDIDRAHANYRAITNL----KRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQA 277
++ + L ID A R TNL K+Q PQ++V +++GG+D++ + + +L SP
Sbjct: 75 ITSDGQLQIDGDLAKNR-FTNLIEIAKQQTPQVKVMISIGGNDNSNN---FKPVLSSPDR 130
Query: 278 RTAFTNSALLLAEQYGFDGI 337
+ F NS + + Y DG+
Sbjct: 131 KKLFINSTVSFLQTYDIDGV 150
>Z54342-15|CAK55172.1| 465|Caenorhabditis elegans Hypothetical
protein C08H9.4b protein.
Length = 465
Score = 41.1 bits (92), Expect = 4e-04
Identities = 18/69 (26%), Positives = 39/69 (56%)
Frame = +2
Query: 167 TNLKRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLS 346
+N + L++ +++GG ++ + ++ L+ + +RT F NS + E+Y DGI++
Sbjct: 170 SNAREASSTLKIMISIGGHYNS---RSFSGLVFNETSRTVFVNSIVSFVEKYDIDGIEMF 226
Query: 347 WQLPKRKPK 373
W P+ + K
Sbjct: 227 WMWPRYRDK 235
>Z54342-5|CAA91147.1| 457|Caenorhabditis elegans Hypothetical
protein C08H9.10 protein.
Length = 457
Score = 40.7 bits (91), Expect = 6e-04
Identities = 19/76 (25%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +2
Query: 137 DRAHANYRAITNLKRQFPQ-LRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLA 313
+R+ + + N R+ L+V +++GG ++ + ++ L+ + +R F NS +
Sbjct: 152 ERSRRKFEEMKNEARKANSTLKVMISIGGQSNS---RSFSRLVSNETSRNVFVNSIVSFV 208
Query: 314 EQYGFDGIDLSWQLPK 361
++Y DGI++ W PK
Sbjct: 209 QKYDIDGIEIFWTWPK 224
>Z70035-13|CAA93874.1| 432|Caenorhabditis elegans Hypothetical
protein R09D1.11 protein.
Length = 432
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/78 (25%), Positives = 44/78 (56%)
Frame = +2
Query: 191 QLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLPKRKP 370
++++ ++GG D+++ ++ ++ S + F S L E Y DG+DL W+ P+
Sbjct: 135 KIKLMFSIGGKDNSK---YFSSVIPSEERIQTFIESILEFLEAYDLDGVDLFWKWPE--- 188
Query: 371 KKIRSSIGSFWHSIKKTF 424
++ R + +F + ++KTF
Sbjct: 189 EEYRDAYFAFINQLRKTF 206
>Z54342-7|CAA91149.1| 460|Caenorhabditis elegans Hypothetical
protein C08H9.12 protein.
Length = 460
Score = 39.9 bits (89), Expect = 0.001
Identities = 17/62 (27%), Positives = 34/62 (54%)
Frame = +2
Query: 176 KRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQL 355
+++ L+V +++GG + + ++ L+ +R FTNS + + Y DG+D+ W
Sbjct: 168 RKESSTLKVMISIGGQYSSGE---FSGLVSKETSRNLFTNSIVSFVQNYDIDGVDIFWTW 224
Query: 356 PK 361
PK
Sbjct: 225 PK 226
>Z47745-6|CAA87667.1| 432|Caenorhabditis elegans Hypothetical
protein R09D1.11 protein.
Length = 432
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/78 (25%), Positives = 44/78 (56%)
Frame = +2
Query: 191 QLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLPKRKP 370
++++ ++GG D+++ ++ ++ S + F S L E Y DG+DL W+ P+
Sbjct: 135 KIKLMFSIGGKDNSK---YFSSVIPSEERIQTFIESILEFLEAYDLDGVDLFWKWPE--- 188
Query: 371 KKIRSSIGSFWHSIKKTF 424
++ R + +F + ++KTF
Sbjct: 189 EEYRDAYFAFINQLRKTF 206
>Z47745-4|CAA87665.2| 445|Caenorhabditis elegans Hypothetical
protein T19H5.1 protein.
Length = 445
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/55 (32%), Positives = 32/55 (58%)
Frame = +2
Query: 194 LRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLP 358
+++ +++GG E+ Q ++ ++ES R F NS L ++ DGIDL W+ P
Sbjct: 134 VKIMISIGGK---ENSQNFSPVIESEYRRQIFINSILTFLKENDLDGIDLFWEWP 185
>Z49913-6|CAA90145.2| 460|Caenorhabditis elegans Hypothetical
protein ZK938.6 protein.
Length = 460
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/64 (26%), Positives = 34/64 (53%)
Frame = +2
Query: 170 NLKRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSW 349
N+++ L+V +++GG ++ + ++ L+ + +R F NS Y DG+D+ W
Sbjct: 166 NVRKASSTLKVMISIGGQYNSGE---FSGLVSNETSRNLFVNSIATFVRDYDIDGVDIFW 222
Query: 350 QLPK 361
PK
Sbjct: 223 TWPK 226
>Z47745-2|CAA87664.1| 407|Caenorhabditis elegans Hypothetical
protein T19H5.3 protein.
Length = 407
Score = 37.9 bits (84), Expect = 0.004
Identities = 19/90 (21%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = +2
Query: 110 VSLNENLDIDRAHANYRAITNLKR-QFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTA 286
+ + ++++D + + + + + + L++GG +T Q L++ P+ +
Sbjct: 111 IGFDGSVEVDHSSRTFSKLKEKSKIESSHFKKLLSIGGRSNT---QFLPLVIADPRRKRR 167
Query: 287 FTNSALLLAEQYGFDGIDLSWQLPKRKPKK 376
F S + + E+Y DG+DL W+ K K
Sbjct: 168 FFKSIISILEEYQLDGVDLLWKWAKNSNTK 197
>Z54342-4|CAA91150.1| 447|Caenorhabditis elegans Hypothetical
protein C08H9.7 protein.
Length = 447
Score = 35.9 bits (79), Expect = 0.016
Identities = 18/81 (22%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +2
Query: 128 LDIDRAHANYRAITNLKRQFPQ-LRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSAL 304
LD +R ++ + + R+ ++V ++VGG D + ++ ++ + +R+ F S +
Sbjct: 138 LDGERTRRKFQEMRSKAREVSSTVKVMISVGGHDHSG---AFSAIMSNEASRSVFIKSIV 194
Query: 305 LLAEQYGFDGIDLSWQLPKRK 367
+ DGI++ W PK +
Sbjct: 195 SFVKNEDIDGIEIFWMWPKHR 215
>Z70035-3|CAA93863.1| 435|Caenorhabditis elegans Hypothetical
protein R09D1.3 protein.
Length = 435
Score = 35.5 bits (78), Expect = 0.022
Identities = 15/60 (25%), Positives = 32/60 (53%)
Frame = +2
Query: 194 LRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLPKRKPK 373
L++ ++GGD+++ D ++ L + Q ++ S + + DG+DL W+ P + K
Sbjct: 139 LKLMFSIGGDENSFD---FSSALANTQMKSTLITSIIAFIHSHMIDGVDLHWKWPTSRDK 195
>U70858-7|AAB09177.1| 1484|Caenorhabditis elegans Hypothetical protein
T01C4.1 protein.
Length = 1484
Score = 35.5 bits (78), Expect = 0.022
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +2
Query: 194 LRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLPKRK 367
+RV VGG D++ Q ++ + R F +S E + DG+DL W+ P+ K
Sbjct: 1030 VRVLFAVGGWDNS---QYFSSVAADSGKRRNFVDSVASFIEHHKIDGVDLDWEYPEMK 1084
>AF016419-9|AAG24054.1| 2025|Caenorhabditis elegans Hypothetical
protein F07G11.9 protein.
Length = 2025
Score = 34.3 bits (75), Expect = 0.050
Identities = 18/66 (27%), Positives = 30/66 (45%)
Frame = +2
Query: 194 LRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLPKRKPK 373
+RV VGG D++ Q ++ + R F +S E DG+DL W+ P K
Sbjct: 1567 VRVLFAVGGWDNS---QYFSSVAADSGKRKKFVDSIASFVEDQKIDGVDLDWEYPDSNGK 1623
Query: 374 KIRSSI 391
++ +
Sbjct: 1624 DAKNHV 1629
>Z70035-2|CAA93862.1| 440|Caenorhabditis elegans Hypothetical
protein R09D1.2 protein.
Length = 440
Score = 33.9 bits (74), Expect = 0.066
Identities = 13/52 (25%), Positives = 31/52 (59%)
Frame = +2
Query: 197 RVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQ 352
++ ++GG +T Q ++ ++++ + + F +S + +QY DG+DL W+
Sbjct: 150 KIMFSIGGPANT---QFFSPIIQNEEMKRKFIDSIIYFLKQYKLDGVDLFWK 198
>Z54342-8|CAA91152.1| 459|Caenorhabditis elegans Hypothetical
protein C08H9.13 protein.
Length = 459
Score = 33.1 bits (72), Expect = 0.12
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +2
Query: 170 NLKRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSW 349
N K Q ++V ++GG + E Y+ ++ R+ F +S + + G+DL W
Sbjct: 156 NRKAQLMNVKVMFSIGGHKNAEH---YSTVVADSTKRSVFIDSIVSFIKSNNASGVDLFW 212
Query: 350 QLP 358
+ P
Sbjct: 213 EWP 215
>U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical
protein C25A8.4 protein.
Length = 1067
Score = 31.1 bits (67), Expect = 0.46
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Frame = +2
Query: 11 QARMLPTDLEPALSFCTHLLYKSAGIQADT----YKMVSLNENLDIDRAHANYRAITNLK 178
+ R+ P L+ ++ CTHL+Y S I DT Y + + DID N R L+
Sbjct: 37 KTRLSPNLLQN-ITTCTHLVYGSIPIDRDTGYPQYSVSDVESGYDID----NIRTFMRLR 91
Query: 179 RQFPQLRVFLTVGGDDDTED 238
+ P ++ + V ED
Sbjct: 92 KYHPNAKLLMGVVRTKPFED 111
>U97407-3|AAM15558.1| 1069|Caenorhabditis elegans Nompa homolog
(drosophila nompa:no mechanoreceptor potential a)
protein 1, isoform b protein.
Length = 1069
Score = 29.9 bits (64), Expect = 1.1
Identities = 21/61 (34%), Positives = 29/61 (47%)
Frame = +2
Query: 53 FCTHLLYKSAGIQADTYKMVSLNENLDIDRAHANYRAITNLKRQFPQLRVFLTVGGDDDT 232
F +L K GI A YK+VSLN L++ + A N R+ +F + DDD
Sbjct: 511 FSRYLHTKQRGIPAKVYKVVSLNSCLEVCAGNPTC-AGANYNRRLGDCTLFDAI--DDDA 567
Query: 233 E 235
E
Sbjct: 568 E 568
>U97407-2|AAB52479.2| 1065|Caenorhabditis elegans Nompa homolog
(drosophila nompa:no mechanoreceptor potential a)
protein 1, isoform a protein.
Length = 1065
Score = 29.9 bits (64), Expect = 1.1
Identities = 21/61 (34%), Positives = 29/61 (47%)
Frame = +2
Query: 53 FCTHLLYKSAGIQADTYKMVSLNENLDIDRAHANYRAITNLKRQFPQLRVFLTVGGDDDT 232
F +L K GI A YK+VSLN L++ + A N R+ +F + DDD
Sbjct: 507 FSRYLHTKQRGIPAKVYKVVSLNSCLEVCAGNPTC-AGANYNRRLGDCTLFDAI--DDDA 563
Query: 233 E 235
E
Sbjct: 564 E 564
>U61950-2|AAC24286.1| 266|Caenorhabditis elegans Hypothetical
protein C45E5.3 protein.
Length = 266
Score = 29.1 bits (62), Expect = 1.9
Identities = 17/74 (22%), Positives = 36/74 (48%)
Frame = +2
Query: 194 LRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLPKRKPK 373
++ +++GG D + + + ++ + R F S + L ++ DG+DL W + P
Sbjct: 11 VKKMISIGGCDYSTN---FTSVVSNQTIRRVFIESIIALLIEHNLDGVDLFW---RWVPA 64
Query: 374 KIRSSIGSFWHSIK 415
++S SF +K
Sbjct: 65 ALQSEFCSFLKELK 78
>AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical
protein Y73F8A.9 protein.
Length = 419
Score = 29.1 bits (62), Expect = 1.9
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -3
Query: 98 CQLGCRQICTADGCRTKEQAPSP 30
CQ C+Q C C T+ AP+P
Sbjct: 103 CQSSCQQTCQTSSCYTQIAAPAP 125
>AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical
protein Y73F8A.8 protein.
Length = 420
Score = 29.1 bits (62), Expect = 1.9
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -3
Query: 98 CQLGCRQICTADGCRTKEQAPSP 30
CQ C+Q C C T+ AP+P
Sbjct: 104 CQSSCQQTCQTSSCYTQIAAPAP 126
>Z81460-3|CAB03829.1| 1228|Caenorhabditis elegans Hypothetical
protein C04A11.3 protein.
Length = 1228
Score = 28.7 bits (61), Expect = 2.5
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -2
Query: 339 SIPSKPYCSARRRAELVKAVRACGDSNKRLYFCGSSVSSSPPT 211
S P+K S +RAE ++VR G SN + SS + PT
Sbjct: 675 STPTKTRASPPKRAESNQSVRTSGSSNSVVQHSASSSTDYVPT 717
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +2
Query: 119 NENLDIDRAHANYRAITNLKRQFPQLRVFLTVGGDDDTEDPQKYNLLLES 268
N D+D AH + R++ + + Q+ R L + D KY L + S
Sbjct: 1780 NLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRESDSDTNKYQLQIAS 1829
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +2
Query: 119 NENLDIDRAHANYRAITNLKRQFPQLRVFLTVGGDDDTEDPQKYNLLLES 268
N D+D AH + R++ + + Q+ R L + D KY L + S
Sbjct: 1853 NLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRESDSDTNKYQLQIAS 1902
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +2
Query: 119 NENLDIDRAHANYRAITNLKRQFPQLRVFLTVGGDDDTEDPQKYNLLLES 268
N D+D AH + R++ + + Q+ R L + D KY L + S
Sbjct: 1853 NLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRESDSDTNKYQLQIAS 1902
>Z70035-4|CAA93864.2| 410|Caenorhabditis elegans Hypothetical
protein R09D1.4 protein.
Length = 410
Score = 27.9 bits (59), Expect = 4.3
Identities = 14/59 (23%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +2
Query: 194 LRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQ-LPKRK 367
+++ +++GGD E+ Q ++ +L F S + DG+D+ W+ +P+ K
Sbjct: 155 VKIMISIGGD---ENSQYFSSVLSDITMCKLFIESIIAFIHTNSIDGMDIHWKWVPETK 210
>AL110490-9|CAB54453.2| 607|Caenorhabditis elegans Hypothetical
protein Y48B6A.8 protein.
Length = 607
Score = 27.1 bits (57), Expect = 7.6
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2
Query: 120 LSETILYVSAWMPADLYS 67
+SE LYV+ W PAD Y+
Sbjct: 116 VSEDCLYVNIWAPADAYN 133
>AF039650-1|AAC14022.3| 607|Caenorhabditis elegans
acetylcholinesterase protein.
Length = 607
Score = 27.1 bits (57), Expect = 7.6
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2
Query: 120 LSETILYVSAWMPADLYS 67
+SE LYV+ W PAD Y+
Sbjct: 116 VSEDCLYVNIWAPADAYN 133
>Z92781-3|CAB07182.1| 326|Caenorhabditis elegans Hypothetical
protein F09C3.4 protein.
Length = 326
Score = 26.6 bits (56), Expect = 10.0
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = +2
Query: 242 QKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLPKRKPKKIR 382
Q ++LL+SP+ R ++ + A + Y + G+D++ + +P K R
Sbjct: 120 QDLSILLKSPRIRLSWLDLAPISCTSYNWTGVDVNSIVKILEPIKSR 166
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,124,758
Number of Sequences: 27780
Number of extensions: 221107
Number of successful extensions: 707
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 673
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 704
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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