Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_L20
(326 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M85234-1|AAA36569.1| 322|Homo sapiens nuclease sensitive elemen... 85 4e-17
M83234-1|AAA59949.1| 320|Homo sapiens DNA-binding protein protein. 85 4e-17
M24070-1|AAA35750.1| 364|Homo sapiens protein ( Human DNA-bindi... 85 4e-17
L28809-1|AAA20871.1| 324|Homo sapiens protein ( Homo sapiens db... 85 4e-17
J03827-1|AAA61308.1| 317|Homo sapiens NFYA protein. 85 4e-17
BC106045-1|AAI06046.1| 324|Homo sapiens Y box binding protein 1... 85 4e-17
BC098435-1|AAH98435.1| 324|Homo sapiens Y box binding protein 1... 85 4e-17
BC090038-1|AAH90038.1| 324|Homo sapiens Y box binding protein 1... 85 4e-17
BC072014-1|AAH72014.1| 266|Homo sapiens YBX1 protein protein. 85 4e-17
BC071708-1|AAH71708.1| 324|Homo sapiens Y box binding protein 1... 85 4e-17
BC070084-1|AAH70084.1| 324|Homo sapiens Y box binding protein 1... 85 4e-17
BC065571-1|AAH65571.1| 324|Homo sapiens Y box binding protein 1... 85 4e-17
BC038384-1|AAH38384.1| 324|Homo sapiens Y box binding protein 1... 85 4e-17
BC018393-1|AAH18393.1| 267|Homo sapiens Unknown (protein for IM... 85 4e-17
BC015208-1|AAH15208.1| 324|Homo sapiens Y box binding protein 1... 85 4e-17
BC010430-1|AAH10430.1| 324|Homo sapiens Y box binding protein 1... 85 4e-17
BC002411-1|AAH02411.1| 324|Homo sapiens Y box binding protein 1... 85 4e-17
BC000064-1|AAH00064.1| 266|Homo sapiens YBX1 protein protein. 85 4e-17
X95325-1|CAA64631.1| 372|Homo sapiens DNA-binding protein protein. 85 6e-17
X72712-1|CAA51261.1| 372|Homo sapiens cold shock domain protein... 85 6e-17
M24069-1|AAA35749.1| 412|Homo sapiens protein ( Human DNA-bindi... 85 6e-17
L29071-1|AAA79243.1| 342|Homo sapiens DNA-binding protein A pro... 85 6e-17
BC021926-1|AAH21926.1| 372|Homo sapiens cold shock domain prote... 85 6e-17
BC015913-1|AAH15913.1| 303|Homo sapiens CSDA protein protein. 85 6e-17
BC015564-1|AAH15564.1| 372|Homo sapiens cold shock domain prote... 85 6e-17
BC009744-1|AAH09744.1| 303|Homo sapiens CSDA protein protein. 85 6e-17
BC008801-1|AAH08801.1| 372|Homo sapiens cold shock domain prote... 85 6e-17
AB209896-1|BAD93133.1| 134|Homo sapiens CSDA protein variant pr... 85 6e-17
BC047760-1|AAH47760.1| 364|Homo sapiens Y box binding protein 2... 83 1e-16
BC033800-1|AAH33800.1| 364|Homo sapiens Y box binding protein 2... 83 1e-16
AF096834-1|AAD30662.1| 364|Homo sapiens germ cell specific Y-bo... 83 1e-16
DQ120685-1|ABB92460.1| 319|Homo sapiens rcNSEP1 protein. 79 2e-15
Z95329-1|CAI21661.2| 250|Homo sapiens lin-28 homolog B (C. eleg... 33 0.27
DQ127228-1|AAZ38897.1| 250|Homo sapiens LIN28B protein. 33 0.27
BC150538-1|AAI50539.1| 227|Homo sapiens Unknown (protein for IM... 33 0.27
BC150537-1|AAI50538.1| 227|Homo sapiens Unknown (protein for IM... 33 0.27
BC141960-1|AAI41961.1| 227|Homo sapiens LIN28B protein protein. 33 0.27
BC127713-1|AAI27714.1| 227|Homo sapiens LIN28B protein protein. 33 0.27
BC127712-1|AAI27713.1| 227|Homo sapiens LIN28B protein protein. 33 0.27
AL135911-2|CAI20969.2| 250|Homo sapiens lin-28 homolog B (C. el... 33 0.27
AK131411-1|BAD18558.1| 250|Homo sapiens protein ( Homo sapiens ... 33 0.27
BC028566-1|AAH28566.1| 209|Homo sapiens LIN28 protein protein. 31 0.63
AL513365-12|CAI21500.1| 209|Homo sapiens lin-28 homolog (C. ele... 31 0.63
AK022519-1|BAB14075.1| 209|Homo sapiens protein ( Homo sapiens ... 31 0.63
AF521099-1|AAM77751.1| 209|Homo sapiens RNA-binding protein LIN... 31 0.63
CR456457-1|CAG30343.1| 153|Homo sapiens dJ347H13.2 protein. 28 7.7
BC067113-1|AAH67113.1| 153|Homo sapiens CSDC2 protein protein. 28 7.7
AL023553-5|CAB46024.1| 153|Homo sapiens protein ( hondrial acon... 28 7.7
AB027011-1|BAA84704.1| 153|Homo sapiens RNA-binding protein PIP... 28 7.7
>M85234-1|AAA36569.1| 322|Homo sapiens nuclease sensitive element
binding protein-1 protein.
Length = 322
Score = 85.4 bits (202), Expect = 4e-17
Identities = 38/45 (84%), Positives = 41/45 (91%)
Frame = +2
Query: 185 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVXVHQTAIIRNNPRK 319
VIA KV GTVKWFNV++GYGFINRNDTKEDV VHQTAI +NNPRK
Sbjct: 53 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRK 97
>M83234-1|AAA59949.1| 320|Homo sapiens DNA-binding protein protein.
Length = 320
Score = 85.4 bits (202), Expect = 4e-17
Identities = 38/45 (84%), Positives = 41/45 (91%)
Frame = +2
Query: 185 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVXVHQTAIIRNNPRK 319
VIA KV GTVKWFNV++GYGFINRNDTKEDV VHQTAI +NNPRK
Sbjct: 51 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRK 95
>M24070-1|AAA35750.1| 364|Homo sapiens protein ( Human DNA-binding
protein B (dbpB) gene, 3' end. ).
Length = 364
Score = 85.4 bits (202), Expect = 4e-17
Identities = 38/45 (84%), Positives = 41/45 (91%)
Frame = +2
Query: 185 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVXVHQTAIIRNNPRK 319
VIA KV GTVKWFNV++GYGFINRNDTKEDV VHQTAI +NNPRK
Sbjct: 94 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRK 138
>L28809-1|AAA20871.1| 324|Homo sapiens protein ( Homo sapiens
dbpB-like protein mRNA, complete cds. ).
Length = 324
Score = 85.4 bits (202), Expect = 4e-17
Identities = 38/45 (84%), Positives = 41/45 (91%)
Frame = +2
Query: 185 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVXVHQTAIIRNNPRK 319
VIA KV GTVKWFNV++GYGFINRNDTKEDV VHQTAI +NNPRK
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRK 98
>J03827-1|AAA61308.1| 317|Homo sapiens NFYA protein.
Length = 317
Score = 85.4 bits (202), Expect = 4e-17
Identities = 38/45 (84%), Positives = 41/45 (91%)
Frame = +2
Query: 185 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVXVHQTAIIRNNPRK 319
VIA KV GTVKWFNV++GYGFINRNDTKEDV VHQTAI +NNPRK
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRK 98
>BC106045-1|AAI06046.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 85.4 bits (202), Expect = 4e-17
Identities = 38/45 (84%), Positives = 41/45 (91%)
Frame = +2
Query: 185 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVXVHQTAIIRNNPRK 319
VIA KV GTVKWFNV++GYGFINRNDTKEDV VHQTAI +NNPRK
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRK 98
>BC098435-1|AAH98435.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 85.4 bits (202), Expect = 4e-17
Identities = 38/45 (84%), Positives = 41/45 (91%)
Frame = +2
Query: 185 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVXVHQTAIIRNNPRK 319
VIA KV GTVKWFNV++GYGFINRNDTKEDV VHQTAI +NNPRK
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRK 98
>BC090038-1|AAH90038.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 85.4 bits (202), Expect = 4e-17
Identities = 38/45 (84%), Positives = 41/45 (91%)
Frame = +2
Query: 185 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVXVHQTAIIRNNPRK 319
VIA KV GTVKWFNV++GYGFINRNDTKEDV VHQTAI +NNPRK
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRK 98
>BC072014-1|AAH72014.1| 266|Homo sapiens YBX1 protein protein.
Length = 266
Score = 85.4 bits (202), Expect = 4e-17
Identities = 38/45 (84%), Positives = 41/45 (91%)
Frame = +2
Query: 185 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVXVHQTAIIRNNPRK 319
VIA KV GTVKWFNV++GYGFINRNDTKEDV VHQTAI +NNPRK
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRK 98
>BC071708-1|AAH71708.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 85.4 bits (202), Expect = 4e-17
Identities = 38/45 (84%), Positives = 41/45 (91%)
Frame = +2
Query: 185 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVXVHQTAIIRNNPRK 319
VIA KV GTVKWFNV++GYGFINRNDTKEDV VHQTAI +NNPRK
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRK 98
>BC070084-1|AAH70084.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 85.4 bits (202), Expect = 4e-17
Identities = 38/45 (84%), Positives = 41/45 (91%)
Frame = +2
Query: 185 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVXVHQTAIIRNNPRK 319
VIA KV GTVKWFNV++GYGFINRNDTKEDV VHQTAI +NNPRK
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRK 98
>BC065571-1|AAH65571.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 85.4 bits (202), Expect = 4e-17
Identities = 38/45 (84%), Positives = 41/45 (91%)
Frame = +2
Query: 185 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVXVHQTAIIRNNPRK 319
VIA KV GTVKWFNV++GYGFINRNDTKEDV VHQTAI +NNPRK
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRK 98
>BC038384-1|AAH38384.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 85.4 bits (202), Expect = 4e-17
Identities = 38/45 (84%), Positives = 41/45 (91%)
Frame = +2
Query: 185 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVXVHQTAIIRNNPRK 319
VIA KV GTVKWFNV++GYGFINRNDTKEDV VHQTAI +NNPRK
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRK 98
>BC018393-1|AAH18393.1| 267|Homo sapiens Unknown (protein for
IMAGE:3882730) protein.
Length = 267
Score = 85.4 bits (202), Expect = 4e-17
Identities = 38/45 (84%), Positives = 41/45 (91%)
Frame = +2
Query: 185 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVXVHQTAIIRNNPRK 319
VIA KV GTVKWFNV++GYGFINRNDTKEDV VHQTAI +NNPRK
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRK 98
>BC015208-1|AAH15208.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 85.4 bits (202), Expect = 4e-17
Identities = 38/45 (84%), Positives = 41/45 (91%)
Frame = +2
Query: 185 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVXVHQTAIIRNNPRK 319
VIA KV GTVKWFNV++GYGFINRNDTKEDV VHQTAI +NNPRK
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRK 98
>BC010430-1|AAH10430.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 85.4 bits (202), Expect = 4e-17
Identities = 38/45 (84%), Positives = 41/45 (91%)
Frame = +2
Query: 185 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVXVHQTAIIRNNPRK 319
VIA KV GTVKWFNV++GYGFINRNDTKEDV VHQTAI +NNPRK
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRK 98
>BC002411-1|AAH02411.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 85.4 bits (202), Expect = 4e-17
Identities = 38/45 (84%), Positives = 41/45 (91%)
Frame = +2
Query: 185 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVXVHQTAIIRNNPRK 319
VIA KV GTVKWFNV++GYGFINRNDTKEDV VHQTAI +NNPRK
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRK 98
>BC000064-1|AAH00064.1| 266|Homo sapiens YBX1 protein protein.
Length = 266
Score = 85.4 bits (202), Expect = 4e-17
Identities = 38/45 (84%), Positives = 41/45 (91%)
Frame = +2
Query: 185 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVXVHQTAIIRNNPRK 319
VIA KV GTVKWFNV++GYGFINRNDTKEDV VHQTAI +NNPRK
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRK 98
>X95325-1|CAA64631.1| 372|Homo sapiens DNA-binding protein protein.
Length = 372
Score = 84.6 bits (200), Expect = 6e-17
Identities = 37/45 (82%), Positives = 41/45 (91%)
Frame = +2
Query: 185 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVXVHQTAIIRNNPRK 319
V+A KV GTVKWFNV++GYGFINRNDTKEDV VHQTAI +NNPRK
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRK 130
>X72712-1|CAA51261.1| 372|Homo sapiens cold shock domain protein A
protein.
Length = 372
Score = 84.6 bits (200), Expect = 6e-17
Identities = 37/45 (82%), Positives = 41/45 (91%)
Frame = +2
Query: 185 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVXVHQTAIIRNNPRK 319
V+A KV GTVKWFNV++GYGFINRNDTKEDV VHQTAI +NNPRK
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRK 130
>M24069-1|AAA35749.1| 412|Homo sapiens protein ( Human DNA-binding
protein A (dbpA) gene, 3' end. ).
Length = 412
Score = 84.6 bits (200), Expect = 6e-17
Identities = 37/45 (82%), Positives = 41/45 (91%)
Frame = +2
Query: 185 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVXVHQTAIIRNNPRK 319
V+A KV GTVKWFNV++GYGFINRNDTKEDV VHQTAI +NNPRK
Sbjct: 156 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRK 200
>L29071-1|AAA79243.1| 342|Homo sapiens DNA-binding protein A
protein.
Length = 342
Score = 84.6 bits (200), Expect = 6e-17
Identities = 37/45 (82%), Positives = 41/45 (91%)
Frame = +2
Query: 185 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVXVHQTAIIRNNPRK 319
V+A KV GTVKWFNV++GYGFINRNDTKEDV VHQTAI +NNPRK
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRK 130
>BC021926-1|AAH21926.1| 372|Homo sapiens cold shock domain protein
A protein.
Length = 372
Score = 84.6 bits (200), Expect = 6e-17
Identities = 37/45 (82%), Positives = 41/45 (91%)
Frame = +2
Query: 185 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVXVHQTAIIRNNPRK 319
V+A KV GTVKWFNV++GYGFINRNDTKEDV VHQTAI +NNPRK
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRK 130
>BC015913-1|AAH15913.1| 303|Homo sapiens CSDA protein protein.
Length = 303
Score = 84.6 bits (200), Expect = 6e-17
Identities = 37/45 (82%), Positives = 41/45 (91%)
Frame = +2
Query: 185 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVXVHQTAIIRNNPRK 319
V+A KV GTVKWFNV++GYGFINRNDTKEDV VHQTAI +NNPRK
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRK 130
>BC015564-1|AAH15564.1| 372|Homo sapiens cold shock domain protein
A protein.
Length = 372
Score = 84.6 bits (200), Expect = 6e-17
Identities = 37/45 (82%), Positives = 41/45 (91%)
Frame = +2
Query: 185 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVXVHQTAIIRNNPRK 319
V+A KV GTVKWFNV++GYGFINRNDTKEDV VHQTAI +NNPRK
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRK 130
>BC009744-1|AAH09744.1| 303|Homo sapiens CSDA protein protein.
Length = 303
Score = 84.6 bits (200), Expect = 6e-17
Identities = 37/45 (82%), Positives = 41/45 (91%)
Frame = +2
Query: 185 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVXVHQTAIIRNNPRK 319
V+A KV GTVKWFNV++GYGFINRNDTKEDV VHQTAI +NNPRK
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRK 130
>BC008801-1|AAH08801.1| 372|Homo sapiens cold shock domain protein
A protein.
Length = 372
Score = 84.6 bits (200), Expect = 6e-17
Identities = 37/45 (82%), Positives = 41/45 (91%)
Frame = +2
Query: 185 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVXVHQTAIIRNNPRK 319
V+A KV GTVKWFNV++GYGFINRNDTKEDV VHQTAI +NNPRK
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRK 130
>AB209896-1|BAD93133.1| 134|Homo sapiens CSDA protein variant
protein.
Length = 134
Score = 84.6 bits (200), Expect = 6e-17
Identities = 37/45 (82%), Positives = 41/45 (91%)
Frame = +2
Query: 185 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVXVHQTAIIRNNPRK 319
V+A KV GTVKWFNV++GYGFINRNDTKEDV VHQTAI +NNPRK
Sbjct: 19 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRK 63
>BC047760-1|AAH47760.1| 364|Homo sapiens Y box binding protein 2
protein.
Length = 364
Score = 83.4 bits (197), Expect = 1e-16
Identities = 37/45 (82%), Positives = 41/45 (91%)
Frame = +2
Query: 185 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVXVHQTAIIRNNPRK 319
V+A +V GTVKWFNV++GYGFINRNDTKEDV VHQTAI RNNPRK
Sbjct: 89 VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRK 133
>BC033800-1|AAH33800.1| 364|Homo sapiens Y box binding protein 2
protein.
Length = 364
Score = 83.4 bits (197), Expect = 1e-16
Identities = 37/45 (82%), Positives = 41/45 (91%)
Frame = +2
Query: 185 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVXVHQTAIIRNNPRK 319
V+A +V GTVKWFNV++GYGFINRNDTKEDV VHQTAI RNNPRK
Sbjct: 89 VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRK 133
>AF096834-1|AAD30662.1| 364|Homo sapiens germ cell specific Y-box
binding protein protein.
Length = 364
Score = 83.4 bits (197), Expect = 1e-16
Identities = 37/45 (82%), Positives = 41/45 (91%)
Frame = +2
Query: 185 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVXVHQTAIIRNNPRK 319
V+A +V GTVKWFNV++GYGFINRNDTKEDV VHQTAI RNNPRK
Sbjct: 89 VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRK 133
>DQ120685-1|ABB92460.1| 319|Homo sapiens rcNSEP1 protein.
Length = 319
Score = 79.4 bits (187), Expect = 2e-15
Identities = 35/45 (77%), Positives = 39/45 (86%)
Frame = +2
Query: 185 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVXVHQTAIIRNNPRK 319
VIA KV GTVKWFNV++GYGFI+RNDTKEDV VH TA +NNPRK
Sbjct: 50 VIATKVLGTVKWFNVRNGYGFIHRNDTKEDVFVHHTAXKKNNPRK 94
>Z95329-1|CAI21661.2| 250|Homo sapiens lin-28 homolog B (C.
elegans) protein.
Length = 250
Score = 32.7 bits (71), Expect = 0.27
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 7/39 (17%)
Frame = +2
Query: 203 SGTVKWFNVKSGYGF---INRN----DTKEDVXVHQTAI 298
+G KWFNV+ G+GF INR D DV VHQ+ +
Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKL 69
>DQ127228-1|AAZ38897.1| 250|Homo sapiens LIN28B protein.
Length = 250
Score = 32.7 bits (71), Expect = 0.27
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 7/39 (17%)
Frame = +2
Query: 203 SGTVKWFNVKSGYGF---INRN----DTKEDVXVHQTAI 298
+G KWFNV+ G+GF INR D DV VHQ+ +
Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKL 69
>BC150538-1|AAI50539.1| 227|Homo sapiens Unknown (protein for
IMAGE:40127315) protein.
Length = 227
Score = 32.7 bits (71), Expect = 0.27
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 7/39 (17%)
Frame = +2
Query: 203 SGTVKWFNVKSGYGF---INRN----DTKEDVXVHQTAI 298
+G KWFNV+ G+GF INR D DV VHQ+ +
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKL 46
>BC150537-1|AAI50538.1| 227|Homo sapiens Unknown (protein for
IMAGE:40127314) protein.
Length = 227
Score = 32.7 bits (71), Expect = 0.27
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 7/39 (17%)
Frame = +2
Query: 203 SGTVKWFNVKSGYGF---INRN----DTKEDVXVHQTAI 298
+G KWFNV+ G+GF INR D DV VHQ+ +
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKL 46
>BC141960-1|AAI41961.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 32.7 bits (71), Expect = 0.27
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 7/39 (17%)
Frame = +2
Query: 203 SGTVKWFNVKSGYGF---INRN----DTKEDVXVHQTAI 298
+G KWFNV+ G+GF INR D DV VHQ+ +
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKL 46
>BC127713-1|AAI27714.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 32.7 bits (71), Expect = 0.27
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 7/39 (17%)
Frame = +2
Query: 203 SGTVKWFNVKSGYGF---INRN----DTKEDVXVHQTAI 298
+G KWFNV+ G+GF INR D DV VHQ+ +
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKL 46
>BC127712-1|AAI27713.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 32.7 bits (71), Expect = 0.27
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 7/39 (17%)
Frame = +2
Query: 203 SGTVKWFNVKSGYGF---INRN----DTKEDVXVHQTAI 298
+G KWFNV+ G+GF INR D DV VHQ+ +
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKL 46
>AL135911-2|CAI20969.2| 250|Homo sapiens lin-28 homolog B (C.
elegans) protein.
Length = 250
Score = 32.7 bits (71), Expect = 0.27
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 7/39 (17%)
Frame = +2
Query: 203 SGTVKWFNVKSGYGF---INRN----DTKEDVXVHQTAI 298
+G KWFNV+ G+GF INR D DV VHQ+ +
Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKL 69
>AK131411-1|BAD18558.1| 250|Homo sapiens protein ( Homo sapiens
cDNA FLJ16517 fis, clone NT2RI3007167. ).
Length = 250
Score = 32.7 bits (71), Expect = 0.27
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 7/39 (17%)
Frame = +2
Query: 203 SGTVKWFNVKSGYGF---INRN----DTKEDVXVHQTAI 298
+G KWFNV+ G+GF INR D DV VHQ+ +
Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKL 69
>BC028566-1|AAH28566.1| 209|Homo sapiens LIN28 protein protein.
Length = 209
Score = 31.5 bits (68), Expect = 0.63
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 7/39 (17%)
Frame = +2
Query: 203 SGTVKWFNVKSGYGFINRN-------DTKEDVXVHQTAI 298
+G KWFNV+ G+GF++ D DV VHQ+ +
Sbjct: 41 AGICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKL 79
>AL513365-12|CAI21500.1| 209|Homo sapiens lin-28 homolog (C.
elegans) protein.
Length = 209
Score = 31.5 bits (68), Expect = 0.63
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 7/39 (17%)
Frame = +2
Query: 203 SGTVKWFNVKSGYGFINRN-------DTKEDVXVHQTAI 298
+G KWFNV+ G+GF++ D DV VHQ+ +
Sbjct: 41 AGICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKL 79
>AK022519-1|BAB14075.1| 209|Homo sapiens protein ( Homo sapiens
cDNA FLJ12457 fis, clone NT2RM1000666, weakly similar to
DNA-BINDING PROTEIN A. ).
Length = 209
Score = 31.5 bits (68), Expect = 0.63
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 7/39 (17%)
Frame = +2
Query: 203 SGTVKWFNVKSGYGFINRN-------DTKEDVXVHQTAI 298
+G KWFNV+ G+GF++ D DV VHQ+ +
Sbjct: 41 AGICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKL 79
>AF521099-1|AAM77751.1| 209|Homo sapiens RNA-binding protein LIN-28
protein.
Length = 209
Score = 31.5 bits (68), Expect = 0.63
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 7/39 (17%)
Frame = +2
Query: 203 SGTVKWFNVKSGYGFINRN-------DTKEDVXVHQTAI 298
+G KWFNV+ G+GF++ D DV VHQ+ +
Sbjct: 41 AGICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKL 79
>CR456457-1|CAG30343.1| 153|Homo sapiens dJ347H13.2 protein.
Length = 153
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 206 GTVKWFNVKSGYGFINRNDTKEDVXVHQTAI 298
G K F+ G+GFI + ED+ VH + I
Sbjct: 71 GVCKQFSRSQGHGFITPENGSEDIFVHVSDI 101
>BC067113-1|AAH67113.1| 153|Homo sapiens CSDC2 protein protein.
Length = 153
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 206 GTVKWFNVKSGYGFINRNDTKEDVXVHQTAI 298
G K F+ G+GFI + ED+ VH + I
Sbjct: 71 GVCKQFSRSQGHGFITPENGSEDIFVHVSDI 101
>AL023553-5|CAB46024.1| 153|Homo sapiens protein ( hondrial
aconitase 2, the gene Statin S).).
Length = 153
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 206 GTVKWFNVKSGYGFINRNDTKEDVXVHQTAI 298
G K F+ G+GFI + ED+ VH + I
Sbjct: 71 GVCKQFSRSQGHGFITPENGSEDIFVHVSDI 101
>AB027011-1|BAA84704.1| 153|Homo sapiens RNA-binding protein PIPPin
protein.
Length = 153
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 206 GTVKWFNVKSGYGFINRNDTKEDVXVHQTAI 298
G K F+ G+GFI + ED+ VH + I
Sbjct: 71 GVCKQFSRSQGHGFITPENGSEDIFVHVSDI 101
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,225,144
Number of Sequences: 237096
Number of extensions: 543371
Number of successful extensions: 1377
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 1368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1377
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1685725862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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