Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_L18
         (522 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92822-7|CAH10786.1|  601|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z83244-9|CAH10804.1|  601|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z83244-8|CAH10803.1|  454|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z83244-3|CAD18878.1|  437|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z83244-2|CAB60300.2|  462|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z83244-1|CAB05827.2|  634|Caenorhabditis elegans Hypothetical pr...    27   8.1  
AF145376-1|AAD39815.1|  634|Caenorhabditis elegans LIT-1 protein.      27   8.1  
AF143244-1|AAD37361.1|  462|Caenorhabditis elegans protein kinas...    27   8.1  
AF143243-1|AAD37360.1|  454|Caenorhabditis elegans protein kinas...    27   8.1  

>Z92822-7|CAH10786.1|  601|Caenorhabditis elegans Hypothetical
           protein W06F12.1d protein.
          Length = 601

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +1

Query: 364 YMKPGRSRGHPASI*ICITLPKESTERNLNNLFPRHSTVF 483
           Y++ GR R H      C T P   +     +L PRH + F
Sbjct: 497 YLEEGRLRFHSCMCSCCYTKPNMPSRLFAQDLDPRHESPF 536


>Z83244-9|CAH10804.1|  601|Caenorhabditis elegans Hypothetical
           protein W06F12.1d protein.
          Length = 601

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +1

Query: 364 YMKPGRSRGHPASI*ICITLPKESTERNLNNLFPRHSTVF 483
           Y++ GR R H      C T P   +     +L PRH + F
Sbjct: 497 YLEEGRLRFHSCMCSCCYTKPNMPSRLFAQDLDPRHESPF 536


>Z83244-8|CAH10803.1|  454|Caenorhabditis elegans Hypothetical
           protein W06F12.1e protein.
          Length = 454

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +1

Query: 364 YMKPGRSRGHPASI*ICITLPKESTERNLNNLFPRHSTVF 483
           Y++ GR R H      C T P   +     +L PRH + F
Sbjct: 350 YLEEGRLRFHSCMCSCCYTKPNMPSRLFAQDLDPRHESPF 389


>Z83244-3|CAD18878.1|  437|Caenorhabditis elegans Hypothetical
           protein W06F12.1c protein.
          Length = 437

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +1

Query: 364 YMKPGRSRGHPASI*ICITLPKESTERNLNNLFPRHSTVF 483
           Y++ GR R H      C T P   +     +L PRH + F
Sbjct: 333 YLEEGRLRFHSCMCSCCYTKPNMPSRLFAQDLDPRHESPF 372


>Z83244-2|CAB60300.2|  462|Caenorhabditis elegans Hypothetical
           protein W06F12.1b protein.
          Length = 462

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +1

Query: 364 YMKPGRSRGHPASI*ICITLPKESTERNLNNLFPRHSTVF 483
           Y++ GR R H      C T P   +     +L PRH + F
Sbjct: 358 YLEEGRLRFHSCMCSCCYTKPNMPSRLFAQDLDPRHESPF 397


>Z83244-1|CAB05827.2|  634|Caenorhabditis elegans Hypothetical
           protein W06F12.1a protein.
          Length = 634

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +1

Query: 364 YMKPGRSRGHPASI*ICITLPKESTERNLNNLFPRHSTVF 483
           Y++ GR R H      C T P   +     +L PRH + F
Sbjct: 530 YLEEGRLRFHSCMCSCCYTKPNMPSRLFAQDLDPRHESPF 569


>AF145376-1|AAD39815.1|  634|Caenorhabditis elegans LIT-1 protein.
          Length = 634

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +1

Query: 364 YMKPGRSRGHPASI*ICITLPKESTERNLNNLFPRHSTVF 483
           Y++ GR R H      C T P   +     +L PRH + F
Sbjct: 530 YLEEGRLRFHSCMCSCCYTKPNMPSRLFAQDLDPRHESPF 569


>AF143244-1|AAD37361.1|  462|Caenorhabditis elegans protein kinase
           LIT-1b protein.
          Length = 462

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +1

Query: 364 YMKPGRSRGHPASI*ICITLPKESTERNLNNLFPRHSTVF 483
           Y++ GR R H      C T P   +     +L PRH + F
Sbjct: 358 YLEEGRLRFHSCMCSCCYTKPNMPSRLFAQDLDPRHESPF 397


>AF143243-1|AAD37360.1|  454|Caenorhabditis elegans protein kinase
           LIT-1a protein.
          Length = 454

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +1

Query: 364 YMKPGRSRGHPASI*ICITLPKESTERNLNNLFPRHSTVF 483
           Y++ GR R H      C T P   +     +L PRH + F
Sbjct: 350 YLEEGRLRFHSCMCSCCYTKPNMPSRLFAQDLDPRHESPF 389


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,171,953
Number of Sequences: 27780
Number of extensions: 191190
Number of successful extensions: 437
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 437
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)