Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_L18
         (522 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   1.4  
AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.           22   3.3  
AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.           22   3.3  

>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +1

Query: 337 LSFNLSRY-IYMKPGRSRGHPASI*ICITLPKESTERNLNNLFP 465
           L   L ++ I ++PG++     S    +T+P E T RNL+   P
Sbjct: 524 LMIELDKFPITLQPGKNTIEQKSTKSSVTIPFERTFRNLDENRP 567


>AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = -3

Query: 187 CEGIVTCVGLLSDFFNSLNVTQMSLMTLM 101
           C G++T +  + DF +   + + SL+ L+
Sbjct: 86  CAGVITALNNVIDFLHDPGLMEASLIGLV 114


>AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = -3

Query: 187 CEGIVTCVGLLSDFFNSLNVTQMSLMTLM 101
           C G++T +  + DF +   + + SL+ L+
Sbjct: 86  CAGVITALNNVIDFLHDPGLMEASLIGLV 114


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,825
Number of Sequences: 438
Number of extensions: 2411
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)