Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_L15
(595 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 345 2e-95
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 344 3e-95
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 344 3e-95
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 344 3e-95
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 344 3e-95
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 344 3e-95
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 344 3e-95
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 343 6e-95
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 339 7e-94
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 318 2e-87
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 264 4e-71
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 219 2e-57
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 179 2e-45
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 174 5e-44
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 174 5e-44
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 174 5e-44
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 168 2e-42
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 145 2e-35
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 101 5e-22
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 51 5e-07
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 51 5e-07
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 42 3e-04
AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 34 0.088
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 32 0.27
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 32 0.35
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 31 0.47
U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir relat... 31 0.62
U42439-7|AAA83511.1| 304|Caenorhabditis elegans Collagen protei... 30 1.4
Z79605-1|CAB01904.1| 719|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z29967-2|CAA82855.1| 722|Caenorhabditis elegans lin-15A protein. 29 2.5
U10413-2|AAA20090.1| 719|Caenorhabditis elegans lin-15A protein... 29 2.5
U10411-1|AAA20087.1| 719|Caenorhabditis elegans lin-15A protein... 29 2.5
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 28 4.4
Z81102-6|CAB03207.2| 571|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z81102-4|CAB03204.2| 639|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z69659-7|CAA93488.2| 571|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z69659-6|CAA93486.2| 639|Caenorhabditis elegans Hypothetical pr... 28 5.8
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 5.8
AC024808-1|AAK29927.1| 309|Caenorhabditis elegans Hypothetical ... 27 7.6
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 345 bits (847), Expect = 2e-95
Identities = 160/161 (99%), Positives = 161/161 (100%)
Frame = +1
Query: 112 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 291
AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL
Sbjct: 7 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 66
Query: 292 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 471
TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE
Sbjct: 67 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 126
Query: 472 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 594
TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIY
Sbjct: 127 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIY 167
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 344 bits (846), Expect = 3e-95
Identities = 159/161 (98%), Positives = 161/161 (100%)
Frame = +1
Query: 112 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 291
AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL
Sbjct: 7 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 66
Query: 292 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 471
TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE
Sbjct: 67 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 126
Query: 472 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 594
TFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIY
Sbjct: 127 TFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIY 167
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 344 bits (846), Expect = 3e-95
Identities = 159/161 (98%), Positives = 161/161 (100%)
Frame = +1
Query: 112 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 291
AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL
Sbjct: 7 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 66
Query: 292 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 471
TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE
Sbjct: 67 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 126
Query: 472 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 594
TFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIY
Sbjct: 127 TFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIY 167
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 344 bits (846), Expect = 3e-95
Identities = 159/161 (98%), Positives = 161/161 (100%)
Frame = +1
Query: 112 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 291
AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL
Sbjct: 7 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 66
Query: 292 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 471
TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE
Sbjct: 67 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 126
Query: 472 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 594
TFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIY
Sbjct: 127 TFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIY 167
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 344 bits (846), Expect = 3e-95
Identities = 159/161 (98%), Positives = 161/161 (100%)
Frame = +1
Query: 112 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 291
AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL
Sbjct: 7 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 66
Query: 292 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 471
TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE
Sbjct: 67 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 126
Query: 472 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 594
TFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIY
Sbjct: 127 TFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIY 167
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 344 bits (846), Expect = 3e-95
Identities = 159/161 (98%), Positives = 161/161 (100%)
Frame = +1
Query: 112 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 291
AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL
Sbjct: 7 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 66
Query: 292 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 471
TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE
Sbjct: 67 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 126
Query: 472 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 594
TFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIY
Sbjct: 127 TFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIY 167
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 344 bits (846), Expect = 3e-95
Identities = 159/161 (98%), Positives = 161/161 (100%)
Frame = +1
Query: 112 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 291
AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL
Sbjct: 7 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 66
Query: 292 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 471
TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE
Sbjct: 67 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 126
Query: 472 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 594
TFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIY
Sbjct: 127 TFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIY 167
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 343 bits (843), Expect = 6e-95
Identities = 158/161 (98%), Positives = 161/161 (100%)
Frame = +1
Query: 112 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 291
AAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL
Sbjct: 7 AALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 66
Query: 292 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 471
TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE
Sbjct: 67 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 126
Query: 472 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 594
TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIY
Sbjct: 127 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIY 167
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 339 bits (834), Expect = 7e-94
Identities = 156/161 (96%), Positives = 160/161 (99%)
Frame = +1
Query: 112 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 291
AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL
Sbjct: 6 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 65
Query: 292 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 471
TLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREKMTQIMFE
Sbjct: 66 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQIMFE 125
Query: 472 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 594
TFNTPAMYV IQAVLSLYASGRTTGIVLD+GDGV+HTVPIY
Sbjct: 126 TFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVPIY 166
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 318 bits (781), Expect = 2e-87
Identities = 146/149 (97%), Positives = 149/149 (100%)
Frame = +1
Query: 148 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 327
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 328 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 507
NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 124
Query: 508 AVLSLYASGRTTGIVLDSGDGVSHTVPIY 594
AVLSLYASGRTTG+VLDSGDGV+HTVPIY
Sbjct: 125 AVLSLYASGRTTGVVLDSGDGVTHTVPIY 153
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 264 bits (646), Expect = 4e-71
Identities = 121/123 (98%), Positives = 123/123 (100%)
Frame = +1
Query: 226 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 405
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 406 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 585
LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTV
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTV 120
Query: 586 PIY 594
PIY
Sbjct: 121 PIY 123
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 219 bits (534), Expect = 2e-57
Identities = 95/159 (59%), Positives = 126/159 (79%), Gaps = 1/159 (0%)
Frame = +1
Query: 118 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 297
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A+S RG+ ++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSI 70
Query: 298 KYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 474
+YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE+ +I FET
Sbjct: 71 EYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFFET 130
Query: 475 FNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPI 591
FN PA+Y+ +QAVLSLYA+GRTTG+VLDSGDGV+H VPI
Sbjct: 131 FNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPI 169
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 179 bits (435), Expect = 2e-45
Identities = 86/167 (51%), Positives = 116/167 (69%), Gaps = 3/167 (1%)
Frame = +1
Query: 103 RGSAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM-VGMGQ-KDSYVGDEAQS 276
+G +VVDNG+G K G+AG + P +FPS+VGRP + VG + KD VG+E
Sbjct: 4 QGRKVIVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQ 63
Query: 277 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKM 453
R +L + YP+++GIV NWDDM +W HTF E L + P+E +LLTE PLNP +NREKM
Sbjct: 64 LRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKM 123
Query: 454 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 594
Q+MFE + ++YVA+QAVL+LYA G TG+V+DSGDGV+H P+Y
Sbjct: 124 FQVMFEQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTHICPVY 170
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 174 bits (423), Expect = 5e-44
Identities = 80/80 (100%), Positives = 80/80 (100%)
Frame = +1
Query: 112 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 291
AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL
Sbjct: 7 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 66
Query: 292 TLKYPIEHGIVTNWDDMEKI 351
TLKYPIEHGIVTNWDDMEKI
Sbjct: 67 TLKYPIEHGIVTNWDDMEKI 86
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 174 bits (423), Expect = 5e-44
Identities = 80/80 (100%), Positives = 80/80 (100%)
Frame = +1
Query: 112 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 291
AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL
Sbjct: 7 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 66
Query: 292 TLKYPIEHGIVTNWDDMEKI 351
TLKYPIEHGIVTNWDDMEKI
Sbjct: 67 TLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 174 bits (423), Expect = 5e-44
Identities = 80/80 (100%), Positives = 80/80 (100%)
Frame = +1
Query: 112 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 291
AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL
Sbjct: 7 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 66
Query: 292 TLKYPIEHGIVTNWDDMEKI 351
TLKYPIEHGIVTNWDDMEKI
Sbjct: 67 TLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 168 bits (409), Expect = 2e-42
Identities = 77/77 (100%), Positives = 77/77 (100%)
Frame = +1
Query: 112 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 291
AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL
Sbjct: 7 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 66
Query: 292 TLKYPIEHGIVTNWDDM 342
TLKYPIEHGIVTNWDDM
Sbjct: 67 TLKYPIEHGIVTNWDDM 83
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 145 bits (351), Expect = 2e-35
Identities = 79/180 (43%), Positives = 105/180 (58%), Gaps = 21/180 (11%)
Frame = +1
Query: 115 ALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGMGQKDSYV 258
A V+DNG+G K G+AG+ P+ + PS V Q V G+ D ++
Sbjct: 8 ACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGIDDLDFFI 67
Query: 259 GDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 435
GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H LLTE PLN
Sbjct: 68 GDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTP 127
Query: 436 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPI 591
NRE +IMFE+FN P +Y+A+QAVL+L AS + TG+V+DSGDGV+H +P+
Sbjct: 128 ENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHCIPV 187
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 101 bits (241), Expect = 5e-22
Identities = 62/178 (34%), Positives = 94/178 (52%), Gaps = 17/178 (9%)
Frame = +1
Query: 112 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA--QSKR- 282
+ LV D GS + GFAG++ P+ PS + Q+ GD + Q+KR
Sbjct: 12 SGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQTKRE 71
Query: 283 -----GILTLKYP---------IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 420
G + P ++ G++ +W+ EKI H++ N L P EHPVL +E+
Sbjct: 72 KNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSES 131
Query: 421 PLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 594
N +A REK+T+IMFE F PA Y++ VLS +A GRT G+++DSG + VP++
Sbjct: 132 SWNDRARREKLTEIMFEKFQVPAYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPVF 189
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 51.2 bits (117), Expect = 5e-07
Identities = 40/153 (26%), Positives = 69/153 (45%), Gaps = 4/153 (2%)
Frame = +1
Query: 118 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 297
++ DNG K G ++PR V SIV + +H+ V + + +E K + +
Sbjct: 6 IIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSLFYV 60
Query: 298 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 477
+ PIE G V NWD ++IW TF + V + LT+ A + ++I+F+ F
Sbjct: 61 R-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYF 118
Query: 478 NTPAMYVAIQAVLSLYASGRTT----GIVLDSG 564
++ + L S + +V+DSG
Sbjct: 119 GFTEVHKTSASTLVAKHSNKINNEKCAVVVDSG 151
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 51.2 bits (117), Expect = 5e-07
Identities = 40/153 (26%), Positives = 69/153 (45%), Gaps = 4/153 (2%)
Frame = +1
Query: 118 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 297
++ DNG K G ++PR V SIV + +H+ V + + +E K + +
Sbjct: 6 IIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSLFYV 60
Query: 298 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 477
+ PIE G V NWD ++IW TF + V + LT+ A + ++I+F+ F
Sbjct: 61 R-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYF 118
Query: 478 NTPAMYVAIQAVLSLYASGRTT----GIVLDSG 564
++ + L S + +V+DSG
Sbjct: 119 GFTEVHKTSASTLVAKHSNKINNEKCAVVVDSG 151
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 41.9 bits (94), Expect = 3e-04
Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 2/160 (1%)
Frame = +1
Query: 118 LVVDNGSGMCKAGFAGDDA--PRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 291
L+++ GS +AG + P++ FP+I R + VG + R I
Sbjct: 181 LILELGSCSIRAGVLTTEPSLPQSFFPAIAVRTDDGKIFVGEDAYRPEIRHNGDFVRPIS 240
Query: 292 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 471
+E + D+ K EL+V P ++ VLL+ P ++ QI E
Sbjct: 241 ATDPSVERYSIDK--DVLKAVIGKVTKELKVEPWKYKVLLSIPQNIPTVLIGELLQICLE 298
Query: 472 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPI 591
+ + Q L LYA TTG+V+D G+ V + VP+
Sbjct: 299 DIKFQSAGITRQPSLILYAYDVTTGVVVDIGERV-NIVPV 337
>AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical
protein F59E12.1 protein.
Length = 811
Score = 33.9 bits (74), Expect = 0.088
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -3
Query: 239 PMPTMTPW*RGRPTIEGNTARGASSPAKPALHIPDPL 129
P T TP RGRP I + ++ P P PDPL
Sbjct: 336 PPATQTPRSRGRPRIHSSASKKTEKPETPRAESPDPL 372
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 32.3 bits (70), Expect = 0.27
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3
Query: 572 TPSPESSTIPVVRPDAYSESTAWIATYMAGVL 477
TP P SST+PVV P ++ T +Y+A L
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYLANTL 896
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 31.9 bits (69), Expect = 0.35
Identities = 19/59 (32%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Frame = +2
Query: 374 SCV*LPRSTQSCSPKLPSTPKPTERR*HRLCSRPSTHPP--CT*LSRPCSHCTRPVVPP 544
+C PR + SC P +P P P C PS P C P + C P PP
Sbjct: 69 NCCGAPRPSPSCCPYVPPAPLPPPPPPASPCCGPSPVPAPCCPPPPAPAAPCCPPPPPP 127
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 31.5 bits (68), Expect = 0.47
Identities = 19/65 (29%), Positives = 28/65 (43%)
Frame = +2
Query: 395 STQSCSPKLPSTPKPTERR*HRLCSRPSTHPPCT*LSRPCSHCTRPVVPPVSCWIPAMVY 574
+++S SP P P P L P PP +S+ + PV PP + P+M+
Sbjct: 1330 TSRSSSPSPPPPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPPLFSPSMIL 1389
Query: 575 PTQYP 589
P P
Sbjct: 1390 PPPPP 1394
>U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir related
protein 2.4 protein.
Length = 299
Score = 31.1 bits (67), Expect = 0.62
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 3/114 (2%)
Frame = +1
Query: 259 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 438
G + K TL + E + + D + K W T + L + + + PL+ K+
Sbjct: 183 GRSCRGKLRDATLDWDTEISL-NHLDRIRKAWKQTSHL-LCIGTSLEIIPMGSLPLDAKS 240
Query: 439 NREKMTQIMF-ETFNTPAMYVAIQA--VLSLYASGRTTGIVLDSGDGVSHTVPI 591
K T I + ET + + AI A L LY+ G+ +D GD + VPI
Sbjct: 241 KGIKTTTINYQETAHEKIVETAIHADVKLILYSLCNALGVNVDLGDDLPDEVPI 294
>U42439-7|AAA83511.1| 304|Caenorhabditis elegans Collagen protein
110 protein.
Length = 304
Score = 29.9 bits (64), Expect = 1.4
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +3
Query: 201 GATSSPGRHGRHGSEG 248
G + +PGRHGRHG+ G
Sbjct: 109 GPSGTPGRHGRHGAPG 124
>Z79605-1|CAB01904.1| 719|Caenorhabditis elegans Hypothetical
protein ZK678.1 protein.
Length = 719
Score = 29.1 bits (62), Expect = 2.5
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 392 RSTQSCSPKLPSTPKPTERR*HRLCSRPSTHPPCT*LSRPCSHCTRPVV 538
+S+ PS P P++ R R S+PS + CT L+ PC C + ++
Sbjct: 173 KSSAEIFSHFPSEPSPSKPRATREGSQPSDYTYCTYLT-PCILCEKALL 220
>Z29967-2|CAA82855.1| 722|Caenorhabditis elegans lin-15A protein.
Length = 722
Score = 29.1 bits (62), Expect = 2.5
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 392 RSTQSCSPKLPSTPKPTERR*HRLCSRPSTHPPCT*LSRPCSHCTRPVV 538
+S+ PS P P++ R R S+PS + CT L+ PC C + ++
Sbjct: 173 KSSAEIFSHFPSEPSPSKPRATREGSQPSDYTYCTYLT-PCILCEKALL 220
>U10413-2|AAA20090.1| 719|Caenorhabditis elegans lin-15A protein
protein.
Length = 719
Score = 29.1 bits (62), Expect = 2.5
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 392 RSTQSCSPKLPSTPKPTERR*HRLCSRPSTHPPCT*LSRPCSHCTRPVV 538
+S+ PS P P++ R R S+PS + CT L+ PC C + ++
Sbjct: 173 KSSAEIFSHFPSEPSPSKPRATREGSQPSDYTYCTYLT-PCILCEKALL 220
>U10411-1|AAA20087.1| 719|Caenorhabditis elegans lin-15A protein
protein.
Length = 719
Score = 29.1 bits (62), Expect = 2.5
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 392 RSTQSCSPKLPSTPKPTERR*HRLCSRPSTHPPCT*LSRPCSHCTRPVV 538
+S+ PS P P++ R R S+PS + CT L+ PC C + ++
Sbjct: 173 KSSAEIFSHFPSEPSPSKPRATREGSQPSDYTYCTYLT-PCILCEKALL 220
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 28.3 bits (60), Expect = 4.4
Identities = 20/51 (39%), Positives = 21/51 (41%), Gaps = 5/51 (9%)
Frame = +3
Query: 201 GATSSPGRHGRHGSEGLLRR**G-TEQEGYPHTQIPH----RTRHRHQLGR 338
G PGRHGRHGS R G + G PH H H H GR
Sbjct: 358 GPPHCPGRHGRHGSRSHSPRGHGHGGRHGPPHCPGRHGHHGPPHHHHHDGR 408
>Z81102-6|CAB03207.2| 571|Caenorhabditis elegans Hypothetical
protein F07C6.4c protein.
Length = 571
Score = 27.9 bits (59), Expect = 5.8
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 389 PRSTQSCSPKLPSTPKPTE 445
P STQ+ P+LP P+P E
Sbjct: 21 PMSTQTSEPQLPDVPEPNE 39
>Z81102-4|CAB03204.2| 639|Caenorhabditis elegans Hypothetical
protein F07C6.4b protein.
Length = 639
Score = 27.9 bits (59), Expect = 5.8
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 389 PRSTQSCSPKLPSTPKPTE 445
P STQ+ P+LP P+P E
Sbjct: 89 PMSTQTSEPQLPDVPEPNE 107
>Z69659-7|CAA93488.2| 571|Caenorhabditis elegans Hypothetical
protein F07C6.4c protein.
Length = 571
Score = 27.9 bits (59), Expect = 5.8
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 389 PRSTQSCSPKLPSTPKPTE 445
P STQ+ P+LP P+P E
Sbjct: 21 PMSTQTSEPQLPDVPEPNE 39
>Z69659-6|CAA93486.2| 639|Caenorhabditis elegans Hypothetical
protein F07C6.4b protein.
Length = 639
Score = 27.9 bits (59), Expect = 5.8
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 389 PRSTQSCSPKLPSTPKPTE 445
P STQ+ P+LP P+P E
Sbjct: 89 PMSTQTSEPQLPDVPEPNE 107
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 5.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 148 KAGFAGDDAPRAVFPSIVGRPRHQG 222
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>AC024808-1|AAK29927.1| 309|Caenorhabditis elegans Hypothetical
protein Y53G8AM.4 protein.
Length = 309
Score = 27.5 bits (58), Expect = 7.6
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 537 YHRYRAGFRRWCIP 578
YH+YRA FR W +P
Sbjct: 135 YHKYRAFFRGWFVP 148
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,194,554
Number of Sequences: 27780
Number of extensions: 357697
Number of successful extensions: 1366
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1353
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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