Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_L14
(474 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_03_0145 + 14833043-14833113,14833544-14833662,14833834-148339... 35 0.039
03_02_0657 + 10225503-10226114,10226563-10226879,10226977-102270... 33 0.16
12_02_1286 - 27555143-27555191,27555290-27555511,27555911-275561... 32 0.21
05_05_0077 + 22226326-22226441,22226527-22226601,22227619-222277... 31 0.47
12_02_1035 - 25570009-25571241,25571940-25573709,25573797-255751... 31 0.63
11_06_0311 - 22279202-22279690,22279976-22280103,22281249-222813... 31 0.63
10_08_0043 - 14390398-14391531,14391850-14393691,14393800-143968... 30 1.1
02_01_0119 - 876317-876610,876937-877099,877222-877302,877508-87... 30 1.1
10_06_0002 + 9382559-9382937,9383008-9383180,9386752-9386901,938... 29 1.9
10_08_0829 - 20871810-20872011,20873226-20873359,20873480-208773... 29 2.5
03_06_0676 - 35460281-35460648,35462097-35462382 29 2.5
08_02_0386 - 16575636-16575698,16575799-16575858,16575947-165762... 28 3.3
07_03_0775 - 21413522-21413797,21414016-21414178,21414274-214143... 28 3.3
05_01_0299 - 2322204-2322734,2324089-2326164 28 3.3
03_03_0047 - 14046750-14046788,14046896-14047045,14047143-140472... 28 3.3
04_01_0227 - 2877303-2877659,2877755-2877897,2878102-2878183,287... 28 4.4
10_06_0105 - 10790092-10790323,10791092-10791234,10791322-107914... 27 7.7
08_02_1018 + 23640889-23641245,23641868-23641954,23642063-236421... 27 7.7
07_03_0532 + 19171290-19171394,19173122-19173302,19173761-191742... 27 7.7
07_01_0039 - 306384-306551,306645-306749,306845-306949,307030-30... 27 7.7
05_03_0249 - 10946993-10947073,10947307-10947432,10948497-109485... 27 7.7
03_06_0307 + 33027012-33027167,33028505-33028615,33028927-330290... 27 7.7
>03_03_0145 +
14833043-14833113,14833544-14833662,14833834-14833991,
14834147-14834587
Length = 262
Score = 34.7 bits (76), Expect = 0.039
Identities = 15/44 (34%), Positives = 30/44 (68%)
Frame = +3
Query: 132 LQELMMQLEGLVQQNNSLQSTLNDSISANSHLKDENTLLKAQVS 263
L++L+ Q++ L Q+N++LQ+ N + L+DEN L++++S
Sbjct: 93 LRDLLSQVKSLRQENSTLQNESNYVTMERNELQDENGALRSEIS 136
>03_02_0657 +
10225503-10226114,10226563-10226879,10226977-10227088,
10227292-10227423,10227519-10227593
Length = 415
Score = 32.7 bits (71), Expect = 0.16
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +3
Query: 87 SLEQYKTLIRQQDSRLQELMMQLEGLVQQNNSLQSTLNDSISANSHLKDE 236
SLE+ +R Q SRL+ + LEG L L++S + NS+LK++
Sbjct: 24 SLEEENKQLRHQVSRLKGQVSSLEGQDTDRKMLWKKLDNSSTGNSYLKEK 73
>12_02_1286 - 27555143-27555191,27555290-27555511,27555911-27556162,
27556683-27557062,27557202-27557311,27557864-27558033,
27558236-27558444,27558528-27558617,27559125-27559264,
27559356-27559463,27559626-27559716,27560736-27560852,
27561497-27561767,27561892-27562193,27562400-27562469,
27563464-27563702,27564613-27564846,27564943-27565179,
27565276-27565734
Length = 1249
Score = 32.3 bits (70), Expect = 0.21
Identities = 15/55 (27%), Positives = 32/55 (58%)
Frame = +1
Query: 307 RRRSENMRRKLENMRRKSENMRSKSESTRKKTIEYEFKVQNLTVEVARLNEQVKS 471
R +E + ++E ++ ++E+ +SKS+ E + K ++ +A+L+ QVKS
Sbjct: 894 RAEAEQISNQMEELKAEAEDWKSKSDECETGIDELKEKNGSVAAALAKLDRQVKS 948
>05_05_0077 +
22226326-22226441,22226527-22226601,22227619-22227781,
22227867-22228166
Length = 217
Score = 31.1 bits (67), Expect = 0.47
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +3
Query: 132 LQELMMQLEGLVQQNNSLQSTLNDSISANSHLKDENTLLKAQ 257
L +L + + L N SLQ ++ + S L+DE T LKA+
Sbjct: 93 LSQLRAEAQKLKSSNESLQDSIKSLKAEKSELRDEKTRLKAE 134
>12_02_1035 -
25570009-25571241,25571940-25573709,25573797-25575118,
25575208-25575555,25576540-25576633
Length = 1588
Score = 30.7 bits (66), Expect = 0.63
Identities = 20/63 (31%), Positives = 34/63 (53%)
Frame = +3
Query: 141 LMMQLEGLVQQNNSLQSTLNDSISANSHLKDENTLLKAQVSATKSSPVQNSLNLDETKIR 320
L L+ + ++N L+ N SISA L+DE LK +A + + S +++E K+
Sbjct: 344 LQNDLDKIREENRKLEEQNNSSISAIIRLQDEVISLK---NAQRLLEEEVSRHVEEKKVL 400
Query: 321 EYE 329
+YE
Sbjct: 401 QYE 403
>11_06_0311 -
22279202-22279690,22279976-22280103,22281249-22281355,
22282799-22282888,22283590-22283660
Length = 294
Score = 30.7 bits (66), Expect = 0.63
Identities = 14/43 (32%), Positives = 29/43 (67%)
Frame = +3
Query: 132 LQELMMQLEGLVQQNNSLQSTLNDSISANSHLKDENTLLKAQV 260
L++L+ Q+E L ++ ++L + S N+ L++EN +L+AQ+
Sbjct: 109 LRDLVSQVESLRKEQSALLTERQYVGSENNELQEENIMLRAQI 151
>10_08_0043 -
14390398-14391531,14391850-14393691,14393800-14396825,
14397510-14397609
Length = 2033
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/70 (21%), Positives = 35/70 (50%)
Frame = +3
Query: 123 DSRLQELMMQLEGLVQQNNSLQSTLNDSISANSHLKDENTLLKAQVSATKSSPVQNSLNL 302
++ + EL ++E L +QN S + + + + LKD L+ ++ + +S+ Q +
Sbjct: 386 ENAVSELKKEVENLTEQNRSSELLIQELRDEINSLKDSKNELQNEIQSLRSTISQLNTEK 445
Query: 303 DETKIREYEA 332
D T + ++
Sbjct: 446 DATLFQHQQS 455
>02_01_0119 -
876317-876610,876937-877099,877222-877302,877508-877570,
878246-878355
Length = 236
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 132 LQELMMQLEGLVQQNNSLQSTLNDSISANSHLKDENTLLKAQ 257
L EL + E L + N L+ T+ D + L+DE LKA+
Sbjct: 114 LAELRGEAEKLKESNEKLRETIKDLKVEKNELRDEKVTLKAE 155
>10_06_0002 + 9382559-9382937,9383008-9383180,9386752-9386901,
9387180-9387325,9387416-9387572,9387720-9387778,
9388204-9388360,9389001-9389150,9389280-9389416,
9390071-9390217,9390292-9390393,9390742-9390799,
9391997-9392034,9392124-9392250,9392320-9392493,
9393125-9393256,9393940-9394049,9394752-9394812,
9395036-9395213,9395326-9395531,9395796-9395915,
9396496-9396594,9396983-9397204,9397482-9397621,
9397741-9397852,9398021-9398071,9398151-9398240,
9398397-9398567,9398663-9398815,9399774-9399950,
9400045-9400182,9400295-9400365,9400739-9400838,
9401324-9401380,9401469-9401525,9401619-9401699,
9401782-9401864,9401975-9402110
Length = 1632
Score = 29.1 bits (62), Expect = 1.9
Identities = 22/93 (23%), Positives = 44/93 (47%)
Frame = +3
Query: 12 VQSLTAKQENGVAEGAPERAGPDGASLEQYKTLIRQQDSRLQELMMQLEGLVQQNNSLQS 191
+ + A++EN + E + +SLE T R+ + + +EG + N LQ
Sbjct: 1081 IMTAEAERENSNLKNLVESLSKNNSSLEYELTSARKGSDATMKKLKDVEG---KCNHLQQ 1137
Query: 192 TLNDSISANSHLKDENTLLKAQVSATKSSPVQN 290
L+ +++++EN +L+ + A SP+ N
Sbjct: 1138 NLDKLQEKLTNMENENHVLRQK--ALNMSPLNN 1168
>10_08_0829 - 20871810-20872011,20873226-20873359,20873480-20877313,
20878057-20878177,20878414-20878451,20879096-20879218,
20879308-20879505,20880270-20880356
Length = 1578
Score = 28.7 bits (61), Expect = 2.5
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +1
Query: 319 ENMRRKLENMRRKSENMRSKSESTRKKTIEYEFKVQNLTVEVARLNEQV 465
+NMRR +E R +N+R K+ +++ Q + E++ L QV
Sbjct: 1122 DNMRRSIEAARSNEDNLRKTLCELELKSKSSDYEKQQIIEEISVLKIQV 1170
>03_06_0676 - 35460281-35460648,35462097-35462382
Length = 217
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/53 (24%), Positives = 29/53 (54%)
Frame = +1
Query: 310 RRSENMRRKLENMRRKSENMRSKSESTRKKTIEYEFKVQNLTVEVARLNEQVK 468
R+ +R+ R + E ++ ++ R+K + +++ L E+A+LNE +K
Sbjct: 113 RKLITLRKAANTSREEVEKLQMENRLFREKEEKSSSEIKKLHQEIAKLNESMK 165
>08_02_0386 -
16575636-16575698,16575799-16575858,16575947-16576239,
16576361-16576517,16576601-16576948,16577047-16577177,
16577417-16577882,16578425-16579132
Length = 741
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/54 (27%), Positives = 31/54 (57%)
Frame = +1
Query: 313 RSENMRRKLENMRRKSENMRSKSESTRKKTIEYEFKVQNLTVEVARLNEQVKSS 474
+ E ++R +E RR S M+ ++ +K E + +++N+T E+ +LN + S
Sbjct: 687 KREALQRSIEVQRRGS--MKYFAQERKKSIDELKRELRNVTWEIRKLNHDTEQS 738
>07_03_0775 -
21413522-21413797,21414016-21414178,21414274-21414351,
21415983-21416176
Length = 236
Score = 28.3 bits (60), Expect = 3.3
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +3
Query: 132 LQELMMQLEGLVQQNNSLQSTLNDSISANSHLKDENTLLKAQ 257
+ EL + + L + N SLQ + + + + L+DE LKA+
Sbjct: 120 MAELRSEAQKLKESNESLQEKIKELKAEKNELRDEKQKLKAE 161
>05_01_0299 - 2322204-2322734,2324089-2326164
Length = 868
Score = 28.3 bits (60), Expect = 3.3
Identities = 12/49 (24%), Positives = 23/49 (46%)
Frame = +1
Query: 322 NMRRKLENMRRKSENMRSKSESTRKKTIEYEFKVQNLTVEVARLNEQVK 468
++R++ E R E + ESTRKK +E E + ++ + +
Sbjct: 564 SLRKEKEEADRLQEERHNLEESTRKKLLEMESAISRANTQLEKAESSAR 612
>03_03_0047 -
14046750-14046788,14046896-14047045,14047143-14047277,
14047615-14047673,14047755-14047871,14048035-14048073,
14048245-14048425,14049381-14049464,14049565-14049633,
14050175-14050315,14050435-14050527,14050767-14050895,
14051187-14051501
Length = 516
Score = 28.3 bits (60), Expect = 3.3
Identities = 10/37 (27%), Positives = 23/37 (62%)
Frame = +3
Query: 75 PDGASLEQYKTLIRQQDSRLQELMMQLEGLVQQNNSL 185
PD ++ +TL+R++++ +++QL G+ Q S+
Sbjct: 389 PDAGLVDYVETLVRKRETEFNVVVLQLNGIDQPKESV 425
>04_01_0227 -
2877303-2877659,2877755-2877897,2878102-2878183,
2878289-2878291
Length = 194
Score = 27.9 bits (59), Expect = 4.4
Identities = 18/71 (25%), Positives = 37/71 (52%)
Frame = +1
Query: 256 KSQQQNRRRYKIH*I*TRRRSENMRRKLENMRRKSENMRSKSESTRKKTIEYEFKVQNLT 435
K QQ +R++K R EN+ KLE +++++ + + + T+++ K++
Sbjct: 112 KLLQQEQRKWK-------RDKENLNSKLEKKTKETKDAKEELKITKREKEYLNTKLETKR 164
Query: 436 VEVARLNEQVK 468
E RL+E+ K
Sbjct: 165 EENKRLDEENK 175
>10_06_0105 -
10790092-10790323,10791092-10791234,10791322-10791429,
10791796-10791903,10793133-10797686,10798347-10798461,
10799597-10799724,10799843-10800043,10800158-10800227,
10801233-10801314,10801433-10801556,10801761-10801778
Length = 1960
Score = 27.1 bits (57), Expect = 7.7
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 168 QQNNSLQSTLNDSISANSHLKDENTLLK 251
++NN L++ L + SA SHLK E T L+
Sbjct: 353 EENNQLRTRLEVAESAFSHLKSEATSLQ 380
>08_02_1018 +
23640889-23641245,23641868-23641954,23642063-23642161,
23642255-23642456,23642569-23642690,23642942-23643226
Length = 383
Score = 27.1 bits (57), Expect = 7.7
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +2
Query: 194 VKRLHIGKFAS*RREHPLKGSSLSNKIVAGTKFIEFRRDE 313
+++L+ G A R L+ S L +I AGT F+EFR E
Sbjct: 222 LRKLNSGNAAP--RSWLLRSSELILRIAAGTGFLEFRPSE 259
>07_03_0532 +
19171290-19171394,19173122-19173302,19173761-19174245,
19174877-19176283,19176413-19176628
Length = 797
Score = 27.1 bits (57), Expect = 7.7
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = +1
Query: 334 KLENMRRKSENMRSKS---ESTRKKTIEYEFKVQNLTVEVARLNEQVK 468
K++ R SE + ++S E+ +T E ++Q+ E+A LNE+VK
Sbjct: 547 KIQEERALSEKLATRSCDLEALGVQTNELRSQLQSANSEIAGLNEKVK 594
>07_01_0039 -
306384-306551,306645-306749,306845-306949,307030-307111,
307457-307656,307754-307915,308043-308152,308255-308594,
308675-308749,308823-309032,309140-309343,309443-309562,
309643-309752,309832-309976,310716-310943
Length = 787
Score = 27.1 bits (57), Expect = 7.7
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +3
Query: 90 LEQYKTLIRQQDSRLQELMMQLEGLVQQNNSLQSTLNDSISANSHLKDENTLLKAQVSAT 269
L++Y T ++Q +S LQ + + + LQ N + + LKD +K Q+
Sbjct: 212 LQEYNTSLQQYNSNLQADATKNGETIAK---LQKEKNTMVETMNGLKDHANSVKMQLDLA 268
Query: 270 KSS 278
KSS
Sbjct: 269 KSS 271
>05_03_0249 -
10946993-10947073,10947307-10947432,10948497-10948552,
10949066-10949338,10951434-10951716
Length = 272
Score = 27.1 bits (57), Expect = 7.7
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +1
Query: 331 RKLENMRRKSENMRSKSESTRKKTIEYEFKVQNLTVEVARLNEQVK 468
R+L M++ E + +S + + ++Q E++RLNEQV+
Sbjct: 112 RELRTMKKNMEAVTKQSRTLEEAKHGSVEEIQQYQKEISRLNEQVQ 157
>03_06_0307 +
33027012-33027167,33028505-33028615,33028927-33029065,
33029215-33029323,33029422-33029425
Length = 172
Score = 27.1 bits (57), Expect = 7.7
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 307 RRRSENMRRKLENMRRKSENMRSKSESTRKKTIEY 411
RR+ E M R+LE +R + + S S K+ +EY
Sbjct: 53 RRKIERMIRRLEKQQRSNADDASNKLSKLKEDLEY 87
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,734,502
Number of Sequences: 37544
Number of extensions: 130973
Number of successful extensions: 663
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 657
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 967140324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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