Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_L14
         (474 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          30   0.011
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      30   0.011
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          30   0.011
AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex det...    24   0.95 
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              23   1.7  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   6.7  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    21   8.9  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   8.9  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 30.3 bits (65), Expect = 0.011
 Identities = 12/35 (34%), Positives = 23/35 (65%)
 Frame = +3

Query: 153 LEGLVQQNNSLQSTLNDSISANSHLKDENTLLKAQ 257
           ++ L+   +  +S LN+ +S  SH K +NT++KA+
Sbjct: 455 VDKLITYFDHFESMLNNGVSIQSHAKAKNTMIKAR 489


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 30.3 bits (65), Expect = 0.011
 Identities = 12/35 (34%), Positives = 23/35 (65%)
 Frame = +3

Query: 153 LEGLVQQNNSLQSTLNDSISANSHLKDENTLLKAQ 257
           ++ L+   +  +S LN+ +S  SH K +NT++KA+
Sbjct: 455 VDKLITYFDHFESMLNNGVSIQSHAKAKNTMIKAR 489


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 30.3 bits (65), Expect = 0.011
 Identities = 12/35 (34%), Positives = 23/35 (65%)
 Frame = +3

Query: 153 LEGLVQQNNSLQSTLNDSISANSHLKDENTLLKAQ 257
           ++ L+   +  +S LN+ +S  SH K +NT++KA+
Sbjct: 81  VDKLITYFDHFESMLNNGVSIQSHAKAKNTMIKAR 115


>AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 23.8 bits (49), Expect = 0.95
 Identities = 10/39 (25%), Positives = 19/39 (48%)
 Frame = +1

Query: 304 TRRRSENMRRKLENMRRKSENMRSKSESTRKKTIEYEFK 420
           +R + E ++ + E    + E  R     T+K  +EYE +
Sbjct: 29  SRTKEERLQHRREAWLIQQEREREHQRLTKKMILEYELR 67


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = +3

Query: 195 LNDSISANSHLKDENTLLKAQVSATKSSPVQNSLNLDETKIREYEAKI 338
           +ND      +++DEN  L  + +  K S V    N +E   RE  AKI
Sbjct: 44  INDVNDGKINIEDENVQLYIECAMKKFSFVDKDGNFNEHVSREI-AKI 90


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 10/42 (23%), Positives = 19/42 (45%)
 Frame = +1

Query: 316 SENMRRKLENMRRKSENMRSKSESTRKKTIEYEFKVQNLTVE 441
           +EN RR +EN+     N     E  ++   E + K   + ++
Sbjct: 467 AENSRRAMENLGDGRNNKEDSEEFRQRLRKELDSKTGGVNLK 508


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 159 GLVQQNNSLQSTLN 200
           G+V+ N  LQ+TLN
Sbjct: 128 GMVRLNTRLQATLN 141


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -3

Query: 241 VFSSLRCEFADMESFNVLCSEL 176
           +F S+   F+D+ +F  +CS +
Sbjct: 419 MFDSVSILFSDVVTFTEICSRI 440


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,360
Number of Sequences: 438
Number of extensions: 1334
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12805416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)