Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_L12
(507 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical ... 101 3e-22
Z93377-6|CAB07572.2| 254|Caenorhabditis elegans Hypothetical pr... 95 3e-20
L16622-3|ABC71837.1| 254|Caenorhabditis elegans Hypothetical pr... 94 5e-20
L16622-1|ABB51198.1| 537|Caenorhabditis elegans Hypothetical pr... 94 5e-20
L23651-11|AAA27959.1| 250|Caenorhabditis elegans Hypothetical p... 91 4e-19
L16622-2|ABB51199.1| 246|Caenorhabditis elegans Hypothetical pr... 76 1e-14
Z66560-1|CAA91449.1| 214|Caenorhabditis elegans Hypothetical pr... 47 9e-06
AC006804-5|AAF60754.1| 213|Caenorhabditis elegans Hypothetical ... 40 8e-04
AF025462-4|AAN72424.1| 123|Caenorhabditis elegans Hypothetical ... 38 0.003
AC024200-13|AAF36004.1| 214|Caenorhabditis elegans Glutathione ... 29 1.5
AF039052-7|AAO91672.2| 462|Caenorhabditis elegans Hypothetical ... 27 7.8
AF039052-6|AAF98635.2| 534|Caenorhabditis elegans Hypothetical ... 27 7.8
>AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical
protein K10F12.4a protein.
Length = 309
Score = 101 bits (242), Expect = 3e-22
Identities = 54/130 (41%), Positives = 79/130 (60%), Gaps = 4/130 (3%)
Frame = +2
Query: 83 LQTGDVLPQYS-GKLRVFAMRFCPYAERTVLVLNAKNLQYDLVFINLDQKPEWIYNFSPK 259
L G + P + G R+++MRFCPYA+R ++ L KN+ ++V +N D+ P W SP
Sbjct: 85 LHPGSIEPPLTPGNYRLYSMRFCPYAQRVLIYLAKKNIPVEVVNVNPDRSPNWYLPKSPI 144
Query: 260 GAVPALEYESGKGIFDSNVINVYLDEKYPEIPLQASDPLRRAHDKLLVESFSAVQSA--- 430
G VPALE +GK +++SNVI YLDE +P + D +AH K+LVE S + +A
Sbjct: 145 GRVPALEI-NGKVVWESNVIVEYLDELFPTNTILPRDAYEKAHQKILVERLSPIMNALFE 203
Query: 431 WYTASFNAQA 460
+Y +S N QA
Sbjct: 204 FYGSSNNPQA 213
>Z93377-6|CAB07572.2| 254|Caenorhabditis elegans Hypothetical
protein F13A7.10 protein.
Length = 254
Score = 94.7 bits (225), Expect = 3e-20
Identities = 46/119 (38%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Frame = +2
Query: 68 MSEKHLQTGDVLPQYSGK--LRVFAMRFCPYAERTVLVLNAKNLQYDLVFINLDQKPEWI 241
++ K L+TGD+ P R+++MRFCP A+R ++ + K + +++ INL QKP+W
Sbjct: 7 INSKALKTGDLPPPSPSPNTFRIYSMRFCPAAQRALIYASVKKIPSEVININLQQKPDWY 66
Query: 242 YNFSPKGAVPALEYESGKG-IFDSNVINVYLDEKYPEIPLQASDPLRRAHDKLLVESFS 415
+ + KG VP LE+ GK + +S VI YLD+ +PE + SDP + KLL+E S
Sbjct: 67 FTKNYKGQVPTLEHAEGKKLVIESAVIPEYLDDIFPETKILPSDPYEKVQQKLLLERLS 125
>L16622-3|ABC71837.1| 254|Caenorhabditis elegans Hypothetical
protein C02D5.3c protein.
Length = 254
Score = 94.3 bits (224), Expect = 5e-20
Identities = 48/127 (37%), Positives = 79/127 (62%), Gaps = 4/127 (3%)
Frame = +2
Query: 68 MSEKHLQTGDVLPQ--YSGKLRVFAMRFCPYAERTVLVLNAKNLQYDLVFINLDQKPEWI 241
++ K ++ GD P SG +R++ MR+CP+A+R ++ + K + +++ I+LDQKP+W
Sbjct: 7 LNTKVVKNGDPAPAPPASGTIRIYNMRYCPWAQRALIFASLKKIPTEVINIHLDQKPDWF 66
Query: 242 YNFSPKGAVPALEYESGKGI-FDSNVINVYLDEKYPEIPLQASDPLRRAHDKLLVESFSA 418
+ KG VPALE++ GK I +S VI YLD+ YPE + +D + KLL++ S
Sbjct: 67 FTKHYKGQVPALEHDEGKKIVIESAVIPEYLDDIYPEPRIIPTDHYEKVQQKLLLDRISG 126
Query: 419 -VQSAWY 436
+ SA+Y
Sbjct: 127 QLSSAFY 133
>L16622-1|ABB51198.1| 537|Caenorhabditis elegans Hypothetical
protein C02D5.3a protein.
Length = 537
Score = 94.3 bits (224), Expect = 5e-20
Identities = 48/127 (37%), Positives = 79/127 (62%), Gaps = 4/127 (3%)
Frame = +2
Query: 68 MSEKHLQTGDVLPQ--YSGKLRVFAMRFCPYAERTVLVLNAKNLQYDLVFINLDQKPEWI 241
++ K ++ GD P SG +R++ MR+CP+A+R ++ + K + +++ I+LDQKP+W
Sbjct: 290 LNTKVVKNGDPAPAPPASGTIRIYNMRYCPWAQRALIFASLKKIPTEVINIHLDQKPDWF 349
Query: 242 YNFSPKGAVPALEYESGKGI-FDSNVINVYLDEKYPEIPLQASDPLRRAHDKLLVESFSA 418
+ KG VPALE++ GK I +S VI YLD+ YPE + +D + KLL++ S
Sbjct: 350 FTKHYKGQVPALEHDEGKKIVIESAVIPEYLDDIYPEPRIIPTDHYEKVQQKLLLDRISG 409
Query: 419 -VQSAWY 436
+ SA+Y
Sbjct: 410 QLSSAFY 416
Score = 76.2 bits (179), Expect = 1e-14
Identities = 36/98 (36%), Positives = 60/98 (61%), Gaps = 2/98 (2%)
Frame = +2
Query: 149 PYAERTVLVLNAKNLQYDLVFINLDQKPEWIYNFSPKGAVPALEYESG-KGIFDSNVINV 325
P A+R ++ + KN+ D++ ++L +KP+W ++ KG VP LE++ G K + +S VI
Sbjct: 28 PVAQRALIYASVKNIPSDVINVHLQEKPDWYFSKHYKGQVPTLEHDEGKKHVIESAVIPE 87
Query: 326 YLDEKYPEIPLQASDPLRRAHDKLLVESFSA-VQSAWY 436
YLD+ YPE + +DP + KLL++ S V A+Y
Sbjct: 88 YLDDIYPETRILPTDPYEKVQQKLLLDRISGQVSPAFY 125
>L23651-11|AAA27959.1| 250|Caenorhabditis elegans Hypothetical
protein C29E4.7 protein.
Length = 250
Score = 91.1 bits (216), Expect = 4e-19
Identities = 45/122 (36%), Positives = 73/122 (59%), Gaps = 1/122 (0%)
Frame = +2
Query: 68 MSEKHLQTGDVLPQYS-GKLRVFAMRFCPYAERTVLVLNAKNLQYDLVFINLDQKPEWIY 244
++ K ++ GD P S G RV+ MRFCP+AER +L + AK ++ ++V +N+ K EW +
Sbjct: 6 VTSKAIRKGDAEPPLSKGSFRVYNMRFCPWAERAMLYVAAKGIEAEVVNLNVTDKLEWYW 65
Query: 245 NFSPKGAVPALEYESGKGIFDSNVINVYLDEKYPEIPLQASDPLRRAHDKLLVESFSAVQ 424
+G PA+E+ +GK + +S I YLD+ +PE + +DP + KLL + +AV
Sbjct: 66 TKHYQGKAPAVEH-NGKVVIESGFIPEYLDDAFPETRILPTDPYEKVQQKLLADRLTAVA 124
Query: 425 SA 430
A
Sbjct: 125 HA 126
>L16622-2|ABB51199.1| 246|Caenorhabditis elegans Hypothetical
protein C02D5.3b protein.
Length = 246
Score = 76.2 bits (179), Expect = 1e-14
Identities = 36/98 (36%), Positives = 60/98 (61%), Gaps = 2/98 (2%)
Frame = +2
Query: 149 PYAERTVLVLNAKNLQYDLVFINLDQKPEWIYNFSPKGAVPALEYESG-KGIFDSNVINV 325
P A+R ++ + KN+ D++ ++L +KP+W ++ KG VP LE++ G K + +S VI
Sbjct: 28 PVAQRALIYASVKNIPSDVINVHLQEKPDWYFSKHYKGQVPTLEHDEGKKHVIESAVIPE 87
Query: 326 YLDEKYPEIPLQASDPLRRAHDKLLVESFSA-VQSAWY 436
YLD+ YPE + +DP + KLL++ S V A+Y
Sbjct: 88 YLDDIYPETRILPTDPYEKVQQKLLLDRISGQVSPAFY 125
>Z66560-1|CAA91449.1| 214|Caenorhabditis elegans Hypothetical
protein D1053.1 protein.
Length = 214
Score = 46.8 bits (106), Expect = 9e-06
Identities = 24/85 (28%), Positives = 43/85 (50%)
Frame = +2
Query: 146 CPYAERTVLVLNAKNLQYDLVFINLDQKPEWIYNFSPKGAVPALEYESGKGIFDSNVINV 325
C + R L L + +Y V + ++ + +P VP + G+ I +S I
Sbjct: 16 CSWRVRIALALKNVDYEYKTVDLLSEEAKSKLKEINPAAKVPTFVVD-GQVITESLAIIE 74
Query: 326 YLDEKYPEIPLQASDPLRRAHDKLL 400
YL+E +P++PL DP++RAH + +
Sbjct: 75 YLEETHPDVPLLPKDPIKRAHARAI 99
>AC006804-5|AAF60754.1| 213|Caenorhabditis elegans Hypothetical
protein Y53G8B.1 protein.
Length = 213
Score = 40.3 bits (90), Expect = 8e-04
Identities = 26/85 (30%), Positives = 41/85 (48%)
Frame = +2
Query: 146 CPYAERTVLVLNAKNLQYDLVFINLDQKPEWIYNFSPKGAVPALEYESGKGIFDSNVINV 325
C RT L L + +Y V + QK + + +P VP L+ +G + +S I
Sbjct: 15 CSSRVRTALALKKIDYEYQPVNLLNKQKEQEFHGNNPAEKVPILKI-NGLTLTESMAIIE 73
Query: 326 YLDEKYPEIPLQASDPLRRAHDKLL 400
YLDE YP+ PL +P +A + +
Sbjct: 74 YLDEIYPDPPLLPKEPELKARARAI 98
>AF025462-4|AAN72424.1| 123|Caenorhabditis elegans Hypothetical
protein K10F12.4b protein.
Length = 123
Score = 38.3 bits (85), Expect = 0.003
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +2
Query: 83 LQTGDVLPQYS-GKLRVFAMRFCPYAERTVLVLNAKNL 193
L G + P + G R+++MRFCPYA+R ++ L KN+
Sbjct: 85 LHPGSIEPPLTPGNYRLYSMRFCPYAQRVLIYLAKKNI 122
>AC024200-13|AAF36004.1| 214|Caenorhabditis elegans Glutathione
s-transferase protein43 protein.
Length = 214
Score = 29.5 bits (63), Expect = 1.5
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Frame = +2
Query: 155 AERTVLVLNAKNLQYDLVFINL-----DQKPEWIYNFSPKGAVPALEYESGKGIFDSNVI 319
A R + L KN+ Y+ I+L E++ + +P VP L +G + +S I
Sbjct: 15 AWRVRIALALKNIDYEYRPIDLFSEESKNNAEFVKH-NPAKKVPTLVI-NGLSLTESLAI 72
Query: 320 NVYLDEKYPEIPLQASDPLRRAHDKLL 400
YLDE YP+ P + +R++ + +
Sbjct: 73 IEYLDEAYPDPPFLPKELDKRSYSRAI 99
>AF039052-7|AAO91672.2| 462|Caenorhabditis elegans Hypothetical
protein T22D1.3b protein.
Length = 462
Score = 27.1 bits (57), Expect = 7.8
Identities = 11/44 (25%), Positives = 26/44 (59%)
Frame = +2
Query: 275 LEYESGKGIFDSNVINVYLDEKYPEIPLQASDPLRRAHDKLLVE 406
++ +G + +++ Y+ EK+P + + A + + RA KLL++
Sbjct: 291 IDSSNGSSTYQISMLR-YIKEKHPHVQVIAGNVVTRAQAKLLID 333
>AF039052-6|AAF98635.2| 534|Caenorhabditis elegans Hypothetical
protein T22D1.3a protein.
Length = 534
Score = 27.1 bits (57), Expect = 7.8
Identities = 11/44 (25%), Positives = 26/44 (59%)
Frame = +2
Query: 275 LEYESGKGIFDSNVINVYLDEKYPEIPLQASDPLRRAHDKLLVE 406
++ +G + +++ Y+ EK+P + + A + + RA KLL++
Sbjct: 291 IDSSNGSSTYQISMLR-YIKEKHPHVQVIAGNVVTRAQAKLLID 333
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,876,192
Number of Sequences: 27780
Number of extensions: 285376
Number of successful extensions: 754
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 749
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -