Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_L10
(709 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 347 7e-97
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 347 7e-97
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 204 7e-54
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 95 7e-21
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 52 8e-08
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 44 2e-05
SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|c... 30 0.28
SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase YakC|Schizo... 30 0.37
SPAC22H12.02 |tfg3|taf14|transcription factor TFIIF complex subu... 29 0.65
SPBC8D2.01 |gsk31||serine/threonine protein kinase Gsk31|Schizos... 28 1.1
SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3 |Schiz... 27 2.6
SPBP23A10.13 |orc4|orp4|origin recognition complex subunit Orc4|... 27 3.5
SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2 |Schizosacc... 26 4.6
SPAC1002.10c |sgt1||SGT1 family transcriptional regulator Sgt1|S... 26 6.1
SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac... 26 6.1
SPAC227.18 |lys3|SPAC2F7.01|saccharopine dehydrogenase [NAD+, L-... 25 8.0
SPBC119.08 |pmk1|spm1|MAP kinase Pmk1 |Schizosaccharomyces pombe... 25 8.0
SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces p... 25 8.0
SPAC1D4.09c |||DUF602 family protein|Schizosaccharomyces pombe|c... 25 8.0
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 347 bits (854), Expect = 7e-97
Identities = 164/233 (70%), Positives = 187/233 (80%)
Frame = +2
Query: 8 APVVRIAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDL 187
+PVV++AVE KN DLPKLVEGLKRL+KSDP V C ESGEHIVAGAGELHLEICLKDL
Sbjct: 486 SPVVQVAVEVKNGNDLPKLVEGLKRLSKSDPCVLCTTSESGEHIVAGAGELHLEICLKDL 545
Query: 188 EEDHACIPIKKSDPVVSYRETVSEESDQMCLSKSPNKHNRLFMKAQPMPEGLPEDIDDGK 367
+EDHA IP+K S PVVSYRE+VSE S LSKSPNKHNR+FM A+PM E L I+ G
Sbjct: 546 QEDHAGIPLKISPPVVSYRESVSEPSSMTALSKSPNKHNRIFMTAEPMSEELSVAIETGH 605
Query: 368 VNPRDDFKTRARYLSDKYEYDLTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVA 547
VNPRDDFK RAR ++D++ +D+T+ARKIWCFGP+ TG N++VD +K V YLNEIKDSVVA
Sbjct: 606 VNPRDDFKVRARIMADEFGWDVTDARKIWCFGPDTTGANVVVDQTKAVAYLNEIKDSVVA 665
Query: 548 GFQWAANEGAMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLL 706
F WA+ EG M EENLR RFNI DV LH DAIHRGGGQIIPT RR +YA L
Sbjct: 666 AFAWASKEGPMFEENLRSCRFNILDVVLHADAIHRGGGQIIPTARRVVYASTL 718
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 347 bits (854), Expect = 7e-97
Identities = 164/233 (70%), Positives = 187/233 (80%)
Frame = +2
Query: 8 APVVRIAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDL 187
+PVV++AVE KN DLPKLVEGLKRL+KSDP V C ESGEHIVAGAGELHLEICLKDL
Sbjct: 486 SPVVQVAVEVKNGNDLPKLVEGLKRLSKSDPCVLCTTSESGEHIVAGAGELHLEICLKDL 545
Query: 188 EEDHACIPIKKSDPVVSYRETVSEESDQMCLSKSPNKHNRLFMKAQPMPEGLPEDIDDGK 367
+EDHA IP+K S PVVSYRE+VSE S LSKSPNKHNR+FM A+PM E L I+ G
Sbjct: 546 QEDHAGIPLKISPPVVSYRESVSEPSSMTALSKSPNKHNRIFMTAEPMSEELSVAIETGH 605
Query: 368 VNPRDDFKTRARYLSDKYEYDLTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVA 547
VNPRDDFK RAR ++D++ +D+T+ARKIWCFGP+ TG N++VD +K V YLNEIKDSVVA
Sbjct: 606 VNPRDDFKVRARIMADEFGWDVTDARKIWCFGPDTTGANVVVDQTKAVAYLNEIKDSVVA 665
Query: 548 GFQWAANEGAMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLL 706
F WA+ EG M EENLR RFNI DV LH DAIHRGGGQIIPT RR +YA L
Sbjct: 666 AFAWASKEGPMFEENLRSCRFNILDVVLHADAIHRGGGQIIPTARRVVYASTL 718
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 204 bits (499), Expect = 7e-54
Identities = 99/236 (41%), Positives = 143/236 (60%), Gaps = 4/236 (1%)
Frame = +2
Query: 14 VVRIAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEE 193
V ++AVEP NP++LPKL++GL++ KS P+ EESGEH + G GE++++ L DL
Sbjct: 600 VFKVAVEPHNPSELPKLLDGLRKTNKSYPLSITKVEESGEHTIFGTGEMYMDCLLYDLRT 659
Query: 194 DHACIPIKKSDPVVSYRETVSEESDQMCLSKSPNKHNRLFMKAQPMPEGLPEDIDDGKVN 373
++ I I+ SDPV + ET + S C S +PNK NR+ M +P+ +G+ DI++GKVN
Sbjct: 660 LYSEIEIRVSDPVARFCETAVDTSSIKCFSDTPNKKNRITMVVEPLEKGISNDIENGKVN 719
Query: 374 PRDDFKTRARYLSDKYEYDLTEARKIWCFGPEGTGPNILVDCSKGV----QYLNEIKDSV 541
K + + Y++DL +R IW FGP+ G NIL D + LN +K+ +
Sbjct: 720 INWPQKRISEFFQKNYDWDLLASRSIWAFGPDDRGTNILRDDTLSTDVDKNVLNSVKEYI 779
Query: 542 VAGFQWAANEGAMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLT 709
GFQW EG + +E +R V F + DV L + I+RGGGQIIPT RR Y+ LT
Sbjct: 780 KQGFQWGTREGPLCDETIRNVNFRLMDVVLAPEQIYRGGGQIIPTARRVCYSSFLT 835
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 95.5 bits (227), Expect = 7e-21
Identities = 46/92 (50%), Positives = 61/92 (66%)
Frame = +2
Query: 11 PVVRIAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLE 190
P+VR+A+EP P ++ KLV GL L ++DP VQ EE+GEH++ AGE+HLE CLKDL
Sbjct: 562 PIVRVALEPVRPFEMNKLVTGLDMLNQADPCVQIAVEENGEHVIMCAGEIHLERCLKDLR 621
Query: 191 EDHACIPIKKSDPVVSYRETVSEESDQMCLSK 286
E A I I+ S P+V YRET D + +K
Sbjct: 622 ERFAKIEIQASQPLVPYRETTIATPDLLAKNK 653
Score = 32.7 bits (71), Expect = 0.053
Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 15/137 (10%)
Frame = +2
Query: 278 LSKSPNKHNRLFMKAQPMPEGLPEDIDDGKVNPRDDFKTRARYLSDKYEYDLTEARK--- 448
+S + +K NR + ++ + + + E + K F R L ++ DL E +
Sbjct: 696 VSSNFSKKNRNVVVSESLTKSMEEVLTPEK------FYERLSKLLEEENSDLGELKNHLD 749
Query: 449 -IWCFGPEGTGPNILVDCSKGVQYL-----------NEIKDSVVAGFQWAANEGAMAEEN 592
I FGP+ GPNIL D +K ++ +++ + VV FQ ++G + E
Sbjct: 750 SIIAFGPKRVGPNILFDKTKKMRDFRRQSDETKLIPSDLSEYVVTAFQLITHQGPLCAEP 809
Query: 593 LRGVRFNIYDVTLHTDA 643
++G+ +I + D+
Sbjct: 810 VQGICVSIDQFDISDDS 826
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 52.0 bits (119), Expect = 8e-08
Identities = 26/85 (30%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Frame = +2
Query: 11 PVVRIAVEPKNPADLPKLVEGLKRLAKSDPMVQC-INEESGEHIVAGAGELHLEICLKDL 187
PV+ ++++PK+ D + L R + DP + ++ ES E I++G GELHLE+ ++ +
Sbjct: 474 PVISLSLKPKSK-DTTSFSKALNRFQREDPTFRVQLDNESKETIISGMGELHLEVYVERM 532
Query: 188 EEDHACIPIKKSDPVVSYRETVSEE 262
++ + + P V++RET+S++
Sbjct: 533 RREYK-VDCETGKPRVAFRETLSKK 556
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 44.4 bits (100), Expect = 2e-05
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Frame = +2
Query: 11 PVVRIAVEPKNPADLPKLVEGLKRLAKSDPMVQCINE-ESGEHIVAGAGELHLEICLKDL 187
PV ++EP + D P L+E L + + DP + + E+G+ ++ G G +HL++ + L
Sbjct: 443 PVCIASIEPYSLKDEPALLEALANMNREDPSFRYTQDLENGQLLIQGMGIMHLQVSYERL 502
Query: 188 EEDHACIPIKKSDPVVSYRETVSEESDQMCLSKSPNKHN 304
+ V YRET+ + S + NK N
Sbjct: 503 VSEFGA-RASLGKVQVGYRETLIDVSFNSVTLSTENKEN 540
>SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 871
Score = 30.3 bits (65), Expect = 0.28
Identities = 22/76 (28%), Positives = 38/76 (50%)
Frame = +2
Query: 116 NEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVSEESDQMCLSKSPN 295
+EE+ + A E C++DL++ + K+SD Y T++ ++KS
Sbjct: 198 DEETLHELFPNASEF---TCVRDLKKLEKKVK-KRSDLGNKYESTLNS-----LINKSVK 248
Query: 296 KHNRLFMKAQPMPEGL 343
KHN+L K +P+P L
Sbjct: 249 KHNKLVKKHKPLPSTL 264
>SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase
YakC|Schizosaccharomyces pombe|chr 1|||Manual
Length = 340
Score = 29.9 bits (64), Expect = 0.37
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = +2
Query: 176 LKDLEEDHACIPIKKSDPVVSYRETVSEESDQMCLSKSPNKHNRLFMKAQPMPE 337
+K LEE+ + +K SD V + ++ + P +++FM PMP+
Sbjct: 287 VKYLEENFGALKVKLSDATVKEIREACDNAEVIGARYPPGAGSKIFMDTPPMPK 340
>SPAC22H12.02 |tfg3|taf14|transcription factor TFIIF complex subunit
Tfg3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 241
Score = 29.1 bits (62), Expect = 0.65
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 6/49 (12%)
Frame = +2
Query: 44 PADLPKLVEGLKRLAKSD--PMVQCINEESGEHIVA----GAGELHLEI 172
P D+ KL EGL++L + D +VQ +NE + GE H+++
Sbjct: 172 PVDMDKLAEGLQKLQEDDLLQVVQMVNENKTPDMYVRNDIEGGEFHIDL 220
>SPBC8D2.01 |gsk31||serine/threonine protein kinase
Gsk31|Schizosaccharomyces pombe|chr 2|||Manual
Length = 381
Score = 28.3 bits (60), Expect = 1.1
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -1
Query: 571 FIGGPLEPGDDRVLDLVQVLHTL 503
FIG PL PGD V LV+++ L
Sbjct: 220 FIGRPLFPGDSSVEQLVEIIRVL 242
>SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1253
Score = 27.1 bits (57), Expect = 2.6
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 341 LPEDIDDGKVNPRDDFKTRARYLSDKYEYDLTEARK 448
LPE ID+GK++ DD KT + D + K
Sbjct: 194 LPEKIDEGKLSDVDDGKTYICWRGDSQYVSINRLEK 229
>SPBP23A10.13 |orc4|orp4|origin recognition complex subunit
Orc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 972
Score = 26.6 bits (56), Expect = 3.5
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = +2
Query: 431 LTEARKIWCFGPEGTGPNILVD--CSKGVQYLNE 526
L E + GP G+G ++LVD S+ Q +NE
Sbjct: 572 LGEGNSVIIVGPRGSGKSVLVDDILSRAAQEINE 605
>SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 830
Score = 26.2 bits (55), Expect = 4.6
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 242 RETVSEESDQMCLSKSPNKHNRLFMKAQP 328
R T EE + L+KSP+ HNR+ P
Sbjct: 466 RLTDDEEREIRALAKSPDIHNRIIASMAP 494
>SPAC1002.10c |sgt1||SGT1 family transcriptional regulator
Sgt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 590
Score = 25.8 bits (54), Expect = 6.1
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -2
Query: 279 KHIWSDSSLTVSRYDTTGSDFLIGM 205
+HIW + L + R + G D ++G+
Sbjct: 57 EHIWQNEELNLQRVEYQGKDCILGI 81
>SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase
Cdc48|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 25.8 bits (54), Expect = 6.1
Identities = 24/135 (17%), Positives = 53/135 (39%), Gaps = 3/135 (2%)
Frame = +2
Query: 95 DPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVSEESDQM 274
D ++ I E+ ++ + L E ++ + E I + + + +++ D
Sbjct: 413 DVDLEQIAAETHGYVGSDLASLCSEAAMQQIREKMDMIDLDEDEIDAEVLDSLGVTMDNF 472
Query: 275 CLSKSPNKHNRLFMKAQPMPEGLPEDI---DDGKVNPRDDFKTRARYLSDKYEYDLTEAR 445
+ + + L +P EDI ++ K R+ + Y + +T ++
Sbjct: 473 RFALGSSNPSALRETVVEVPNVRWEDIGGLEEVKRELRETVQMPVMYAEKFLRFGVTPSK 532
Query: 446 KIWCFGPEGTGPNIL 490
+ FGP GTG +L
Sbjct: 533 GVLFFGPPGTGKTLL 547
>SPAC227.18 |lys3|SPAC2F7.01|saccharopine dehydrogenase [NAD+,
L-lysine forming] |Schizosaccharomyces pombe|chr
1|||Manual
Length = 368
Score = 25.4 bits (53), Expect = 8.0
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -2
Query: 678 VVGMI*PPPL*MASV*RVTS*MLNRTPLKFSSAMAPSLAA 559
V G+ PPPL + S+ + + + + FS A+ PSL A
Sbjct: 305 VKGVTTPPPLEVISIDHLPTLLPRESSEAFSEALIPSLLA 344
>SPBC119.08 |pmk1|spm1|MAP kinase Pmk1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 422
Score = 25.4 bits (53), Expect = 8.0
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = -1
Query: 565 GGPLEPGDDRVLDLVQVLHTLRAVDEDVRSGALGAEAPDLTR 440
G PL G D V L +LH L DE+ S + A + R
Sbjct: 225 GTPLFKGKDFVHQLNLILHQLGTPDEETLSHISSSRAQEYVR 266
>SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1323
Score = 25.4 bits (53), Expect = 8.0
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +2
Query: 167 EICLKDLEEDHACIPIKKSDPVVSYRETVSEESDQMCLSKSPNK 298
E+C +LE+D I +S +S + +++ DQ+ S + +K
Sbjct: 64 ELCNFELEKDSLESMIHESSTALSAQSNTAQDGDQLASSSTISK 107
>SPAC1D4.09c |||DUF602 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 240
Score = 25.4 bits (53), Expect = 8.0
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +2
Query: 38 KNPADLPKLVEGLKRLAKSDPMVQC-INEES--GEHIVAGAGELHLEICLKDLEEDHACI 208
K P +P L KR KS QC I +E + G G+L+ + + + D + +
Sbjct: 16 KEPGKVPPLDIDFKRSVKSSQFSQCAITDEPLYPPIVSCGLGKLYNKASILQMLLDRSSV 75
Query: 209 PIKKSDPVVSYRETV 253
P K + S ++ V
Sbjct: 76 P-KSPSHIKSLKDVV 89
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,689,860
Number of Sequences: 5004
Number of extensions: 55454
Number of successful extensions: 215
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 212
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 329179816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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