Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_L10
(709 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 417 e-117
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 412 e-115
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 213 1e-55
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 209 2e-54
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 64 9e-11
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 59 3e-09
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 59 3e-09
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 40 0.002
U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile (un... 35 0.066
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 3.3
Z82076-6|CAH10809.1| 450|Caenorhabditis elegans Hypothetical pr... 29 4.3
AL132865-7|CAB60598.1| 234|Caenorhabditis elegans Hypothetical ... 29 4.3
AL021066-2|CAH10790.1| 124|Caenorhabditis elegans Hypothetical ... 29 4.3
U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical p... 28 7.5
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical protein
F25H5.4 protein.
Length = 852
Score = 417 bits (1027), Expect = e-117
Identities = 187/234 (79%), Positives = 212/234 (90%)
Frame = +2
Query: 8 APVVRIAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDL 187
+PVVR+AVE KNPADLPKLVEGLKRLAKSDPMVQCI EESGEHI+AGAGELHLEICLKDL
Sbjct: 496 SPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIFEESGEHIIAGAGELHLEICLKDL 555
Query: 188 EEDHACIPIKKSDPVVSYRETVSEESDQMCLSKSPNKHNRLFMKAQPMPEGLPEDIDDGK 367
EEDHACIP+KKSDPVVSYRETV ES+Q+CLSKSPNKHNRL AQPMP+GL +DI+ G
Sbjct: 556 EEDHACIPLKKSDPVVSYRETVQSESNQICLSKSPNKHNRLHCTAQPMPDGLADDIEGGT 615
Query: 368 VNPRDDFKTRARYLSDKYEYDLTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVA 547
VN RD+FK RA+ L++KYEYD+TEARKIWCFGP+GTGPN+L+D +KGVQYLNEIKDSVVA
Sbjct: 616 VNARDEFKARAKILAEKYEYDVTEARKIWCFGPDGTGPNLLMDVTKGVQYLNEIKDSVVA 675
Query: 548 GFQWAANEGAMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLT 709
GFQWA EG +++EN+RGVRFN++DVTLH DAIHRGGGQIIPT RR YA +LT
Sbjct: 676 GFQWATREGVLSDENMRGVRFNVHDVTLHADAIHRGGGQIIPTARRVFYASVLT 729
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 412 bits (1014), Expect = e-115
Identities = 185/234 (79%), Positives = 210/234 (89%)
Frame = +2
Query: 8 APVVRIAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDL 187
+PVVR+AVE KNPADLPKLVEGLKRLAKSDPMVQCI EESGEHI+AGAGELHLEICLKDL
Sbjct: 496 SPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIFEESGEHIIAGAGELHLEICLKDL 555
Query: 188 EEDHACIPIKKSDPVVSYRETVSEESDQMCLSKSPNKHNRLFMKAQPMPEGLPEDIDDGK 367
EEDHACIP+KKSDPVVSYRETV ES+Q+CLSKSPNKHNRL AQPMP+GL +DI+ G
Sbjct: 556 EEDHACIPLKKSDPVVSYRETVQSESNQICLSKSPNKHNRLHCTAQPMPDGLADDIEGGT 615
Query: 368 VNPRDDFKTRARYLSDKYEYDLTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVA 547
V+ RD+FK RA+Y +KYEY +TEARKIWCFGP+GTGPN+L+D +KGVQYLNEIKDSVVA
Sbjct: 616 VSARDEFKARAKYPGEKYEYAVTEARKIWCFGPDGTGPNLLMDVTKGVQYLNEIKDSVVA 675
Query: 548 GFQWAANEGAMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLT 709
GFQWA EG +++EN+RGVRFN++DVTLH DAIHRGGGQIIPT RR YA +LT
Sbjct: 676 GFQWATREGVLSDENMRGVRFNVHDVTLHADAIHRGGGQIIPTARRVFYASVLT 729
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 213 bits (520), Expect = 1e-55
Identities = 98/234 (41%), Positives = 153/234 (65%), Gaps = 4/234 (1%)
Frame = +2
Query: 17 VRIAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEED 196
V++AVEP NP++LPK+++GL+++ KS P++ EESGEH++ G GE +++ + D+ +
Sbjct: 592 VKLAVEPINPSELPKMLDGLRKVNKSYPLLTTRVEESGEHVLLGTGEFYMDCVMHDMRKV 651
Query: 197 HACIPIKKSDPVVSYRETVSEESDQMCLSKSPNKHNRLFMKAQPMPEGLPEDIDDGKVNP 376
+ I IK +DPVV++ ETV E S C +++PNK N++ M A+P+ + L EDI++ V
Sbjct: 652 FSEIDIKVADPVVTFNETVIETSTLKCFAETPNKKNKITMMAEPLEKQLDEDIENEVVQI 711
Query: 377 RDDFKTRARYLSDKYEYDLTEARKIWCFGPEGTGPNILVD----CSKGVQYLNEIKDSVV 544
+ + + KY +DL AR IW FGP+ TGPNIL+D L+ +++S+V
Sbjct: 712 GWNRRRLGEFFQTKYNWDLLAARSIWAFGPDTTGPNILLDDTLPSEVDKHLLSTVRESLV 771
Query: 545 AGFQWAANEGAMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLL 706
GFQWA EG + EE +R V+F + D + T+ ++RGGGQ+IPT RRC Y+ L
Sbjct: 772 QGFQWATREGPLCEEPIRQVKFKLLDAAIATEPLYRGGGQMIPTARRCAYSAFL 825
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 209 bits (510), Expect = 2e-54
Identities = 97/234 (41%), Positives = 152/234 (64%), Gaps = 4/234 (1%)
Frame = +2
Query: 17 VRIAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEED 196
V++AVEP NP++LPK+++GL+++ KS P++ EESGEH++ G GE +++ + D+ +
Sbjct: 467 VKLAVEPINPSELPKMLDGLRKVNKSYPLLTTRVEESGEHVLLGTGEFYMDCVMHDMRKV 526
Query: 197 HACIPIKKSDPVVSYRETVSEESDQMCLSKSPNKHNRLFMKAQPMPEGLPEDIDDGKVNP 376
+ I IK +DPVV++ ETV E S C +++PNK N++ M A+P+ + L EDI++ V
Sbjct: 527 FSEIDIKVADPVVTFNETVIETSTLKCFAETPNKKNKITMMAEPLEKQLDEDIENEVVQI 586
Query: 377 RDDFKTRARYLSDKYEYDLTEARKIWCFGPEGTGPNILVD----CSKGVQYLNEIKDSVV 544
+ + + KY +DL AR IW FG + TGPNIL+D L+ +++S+V
Sbjct: 587 GWNRRRLGEFFQTKYNWDLLAARSIWAFGLDTTGPNILLDDTLPSEVDKHLLSTVRESLV 646
Query: 545 AGFQWAANEGAMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLL 706
GFQWA EG + EE +R V+F + D + T+ ++RGGGQ+IPT RRC Y+ L
Sbjct: 647 QGFQWATREGPLCEEPIRQVKFKLLDAAIATEPLYRGGGQMIPTARRCAYSAFL 700
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 64.1 bits (149), Expect = 9e-11
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Frame = +2
Query: 11 PVVRIAVEPKNPADLPKLVEGLKRLAKSDPMVQC-INEESGEHIVAGAGELHLEICLKDL 187
PV+ +A++P N D ++ L R K DP + N+E+ E IV+G GELHLEI + +
Sbjct: 446 PVISMAIKPVNRKDADNFIKALTRFTKEDPTFRREYNQEAKETIVSGMGELHLEIYAQRM 505
Query: 188 EEDHACIPIKKSDPVVSYRE 247
+ ++ C P++ P V+YRE
Sbjct: 506 KSEYNC-PVELGKPTVAYRE 524
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 59.3 bits (137), Expect = 3e-09
Identities = 31/84 (36%), Positives = 51/84 (60%)
Frame = +2
Query: 14 VVRIAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEE 193
+VR+++ + D+ L E LK LA D ++ + E+GE + AGE+HL+ C+KDL
Sbjct: 477 LVRVSISTQQLDDMDDLREKLKLLALLDTSLKVMELENGELAMVTAGEVHLQKCIKDL-N 535
Query: 194 DHACIPIKKSDPVVSYRETVSEES 265
D + + S+P+V + ETV E+S
Sbjct: 536 DLGLVDLDVSEPIVPFMETVIEDS 559
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 59.3 bits (137), Expect = 3e-09
Identities = 31/84 (36%), Positives = 51/84 (60%)
Frame = +2
Query: 14 VVRIAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEE 193
+VR+++ + D+ L E LK LA D ++ + E+GE + AGE+HL+ C+KDL
Sbjct: 477 LVRVSISTQQLDDMDDLREKLKLLALLDTSLKVMELENGELAMVTAGEVHLQKCIKDL-N 535
Query: 194 DHACIPIKKSDPVVSYRETVSEES 265
D + + S+P+V + ETV E+S
Sbjct: 536 DLGLVDLDVSEPIVPFMETVIEDS 559
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +2
Query: 29 VEPKNPADLPKLVEGLKRLAKSDPMVQC-INEESGEHIVAGAGELHLEICLKDLEEDHAC 205
+EP + L + + L+ L + DP ++ + ++G+ IV GELHLE +KD + +
Sbjct: 399 IEPPSNRQLNQFNKALEELTREDPSMKIRFDRDTGQTIVETQGELHLE-AIKDRLKRNYK 457
Query: 206 IPIKKSDPVVSYRETVSEE 262
+ + V+YRE ++EE
Sbjct: 458 LDVFIGKLQVAYREMLTEE 476
>U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile
(unfertilizable) protein2 protein.
Length = 548
Score = 34.7 bits (76), Expect = 0.066
Identities = 23/65 (35%), Positives = 33/65 (50%)
Frame = +2
Query: 200 ACIPIKKSDPVVSYRETVSEESDQMCLSKSPNKHNRLFMKAQPMPEGLPEDIDDGKVNPR 379
AC+PI VS E S+ES+ K +K + +KA + +G+P D DDG +
Sbjct: 228 ACLPISVKCDGVSDCENESDESNCNKCQKGAHKCGKNCIKASKVCDGIP-DCDDGSDEHQ 286
Query: 380 DDFKT 394
D KT
Sbjct: 287 CDCKT 291
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = -2
Query: 72 PSTSLGRSAGFLGSTAIRTTGAS 4
PSTS G AGFL STA + GA+
Sbjct: 142 PSTSSGLPAGFLNSTANSSVGAN 164
>Z82076-6|CAH10809.1| 450|Caenorhabditis elegans Hypothetical
protein W07G1.5b protein.
Length = 450
Score = 28.7 bits (61), Expect = 4.3
Identities = 23/82 (28%), Positives = 37/82 (45%)
Frame = +2
Query: 140 VAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVSEESDQMCLSKSPNKHNRLFMK 319
V GA E+ LE ++ + D A I + PVV+ R ++ ++S +
Sbjct: 293 VTGAAEI-LEFPEEEKKIDMATIHRTPTPPVVASRPATAKAPGTPA-NRSATALEAKSVS 350
Query: 320 AQPMPEGLPEDIDDGKVNPRDD 385
QP PE E+ D+G + DD
Sbjct: 351 QQPTPESSEEEEDEGNGDEDDD 372
>AL132865-7|CAB60598.1| 234|Caenorhabditis elegans Hypothetical
protein Y62E10A.10 protein.
Length = 234
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/66 (27%), Positives = 33/66 (50%)
Frame = +2
Query: 356 DDGKVNPRDDFKTRARYLSDKYEYDLTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKD 535
++G+ P+ F R +YL + L++A++ GP P+ + + KG +N I
Sbjct: 61 ENGRFLPKTSFNARRQYLCAEETGYLSKAQQRPAKGPNPMDPSQMTEMLKG-NMMNMIPM 119
Query: 536 SVVAGF 553
VV G+
Sbjct: 120 IVVGGW 125
>AL021066-2|CAH10790.1| 124|Caenorhabditis elegans Hypothetical
protein H31B20.2 protein.
Length = 124
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +2
Query: 245 ETVSEESDQMCLSKSPNKHNRLFMKAQPMPEGLPEDIDDGKVNPRDDF 388
E V +E D+M ++ P+K + L ++ Q + D D+ K DDF
Sbjct: 78 EFVEQEEDEMIRTEGPSKASELPIREQSKRKEAVSDADESK-QDEDDF 124
>U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical protein
F21C10.7 protein.
Length = 2541
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +2
Query: 209 PIKKSDPVVSYRETVSEESDQMCLSKSPNKHNRLFMKAQPMPE 337
P S+ V + R+T E+ Q ++K+P+ N ++ P+PE
Sbjct: 1626 PGPTSEHVATIRKTPVRETHQSSITKAPSLENVAKIRQSPVPE 1668
>Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical
protein C47E8.8 protein.
Length = 1675
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -2
Query: 294 LGDLDKHIWSDSSLTVSRYDTTGSDFLIGMQAWSSSRSLRQ 172
+G+L + + S SS SR+D T D + A SS+ + R+
Sbjct: 624 MGELQRPVTSQSSRKSSRWDVTEEDLKRKLSATSSTHNPRE 664
>Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical
protein C47E8.8 protein.
Length = 1675
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -2
Query: 294 LGDLDKHIWSDSSLTVSRYDTTGSDFLIGMQAWSSSRSLRQ 172
+G+L + + S SS SR+D T D + A SS+ + R+
Sbjct: 624 MGELQRPVTSQSSRKSSRWDVTEEDLKRKLSATSSTHNPRE 664
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,180,612
Number of Sequences: 27780
Number of extensions: 327930
Number of successful extensions: 1158
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1153
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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