Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_L08
(528 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69392-1|CAA49189.1| 145|Homo sapiens ribosomal protein L26 pro... 186 3e-47
CR456828-1|CAG33109.1| 145|Homo sapiens RPL26 protein. 186 3e-47
BC071664-1|AAH71664.1| 145|Homo sapiens RPL26 protein protein. 186 3e-47
AB061829-1|BAB79467.1| 145|Homo sapiens ribosomal protein L26 p... 186 3e-47
BC070192-1|AAH70192.1| 145|Homo sapiens ribosomal protein L26-l... 186 4e-47
BC017360-1|AAH17360.1| 145|Homo sapiens ribosomal protein L26-l... 186 4e-47
L07287-1|AAA60279.1| 145|Homo sapiens ribosomal protein L26 pro... 184 2e-46
BC126291-1|AAI26292.1| 265|Homo sapiens C-type lectin domain fa... 31 1.9
BC126289-1|AAI26290.1| 265|Homo sapiens C-type lectin domain fa... 31 1.9
BC063424-1|AAH63424.1| 213|Homo sapiens CLEC12A protein protein. 31 1.9
AY547296-1|AAT11783.1| 275|Homo sapiens C-type lectin-like mole... 31 1.9
AY498551-1|AAS00606.1| 232|Homo sapiens myeloid inhibitory C-ty... 31 1.9
AY498550-1|AAS00605.1| 265|Homo sapiens myeloid inhibitory C-ty... 31 1.9
AY426759-1|AAR84594.1| 265|Homo sapiens dendritic cell associat... 31 1.9
AF247788-1|AAL95693.1| 265|Homo sapiens C-type lectin protein C... 31 1.9
AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ... 31 3.3
AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein. 31 3.3
>X69392-1|CAA49189.1| 145|Homo sapiens ribosomal protein L26
protein.
Length = 145
Score = 186 bits (454), Expect = 3e-47
Identities = 89/137 (64%), Positives = 107/137 (78%)
Frame = +2
Query: 23 MKYNKLVTSSRRKNRKRHFSAPSHIRRVLMSAPLSKELRQKFNVKSMPIRKDDEVQVVRG 202
MK+N VTS R KNRKRHF+APSHIRR +MS+PLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 203 HXXXXXXXXXXXXXXXXFVVYIERIQREKANGASVYVGIHPSKCVIVKLKMNKDRKTILD 382
H +V+YIER+QREKANG +V+VGIHPSK VI +LK++KDRK IL+
Sbjct: 61 HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120
Query: 383 RRASGRLAALGKDKGKY 433
R+A R +GK+KGKY
Sbjct: 121 RKAKSR--QVGKEKGKY 135
>CR456828-1|CAG33109.1| 145|Homo sapiens RPL26 protein.
Length = 145
Score = 186 bits (454), Expect = 3e-47
Identities = 89/137 (64%), Positives = 107/137 (78%)
Frame = +2
Query: 23 MKYNKLVTSSRRKNRKRHFSAPSHIRRVLMSAPLSKELRQKFNVKSMPIRKDDEVQVVRG 202
MK+N VTS R KNRKRHF+APSHIRR +MS+PLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 203 HXXXXXXXXXXXXXXXXFVVYIERIQREKANGASVYVGIHPSKCVIVKLKMNKDRKTILD 382
H +V+YIER+QREKANG +V+VGIHPSK VI +LK++KDRK IL+
Sbjct: 61 HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120
Query: 383 RRASGRLAALGKDKGKY 433
R+A R +GK+KGKY
Sbjct: 121 RKAKSR--QVGKEKGKY 135
>BC071664-1|AAH71664.1| 145|Homo sapiens RPL26 protein protein.
Length = 145
Score = 186 bits (454), Expect = 3e-47
Identities = 89/137 (64%), Positives = 107/137 (78%)
Frame = +2
Query: 23 MKYNKLVTSSRRKNRKRHFSAPSHIRRVLMSAPLSKELRQKFNVKSMPIRKDDEVQVVRG 202
MK+N VTS R KNRKRHF+APSHIRR +MS+PLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 203 HXXXXXXXXXXXXXXXXFVVYIERIQREKANGASVYVGIHPSKCVIVKLKMNKDRKTILD 382
H +V+YIER+QREKANG +V+VGIHPSK VI +LK++KDRK IL+
Sbjct: 61 HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120
Query: 383 RRASGRLAALGKDKGKY 433
R+A R +GK+KGKY
Sbjct: 121 RKAKSR--QVGKEKGKY 135
>AB061829-1|BAB79467.1| 145|Homo sapiens ribosomal protein L26
protein.
Length = 145
Score = 186 bits (454), Expect = 3e-47
Identities = 89/137 (64%), Positives = 107/137 (78%)
Frame = +2
Query: 23 MKYNKLVTSSRRKNRKRHFSAPSHIRRVLMSAPLSKELRQKFNVKSMPIRKDDEVQVVRG 202
MK+N VTS R KNRKRHF+APSHIRR +MS+PLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 203 HXXXXXXXXXXXXXXXXFVVYIERIQREKANGASVYVGIHPSKCVIVKLKMNKDRKTILD 382
H +V+YIER+QREKANG +V+VGIHPSK VI +LK++KDRK IL+
Sbjct: 61 HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120
Query: 383 RRASGRLAALGKDKGKY 433
R+A R +GK+KGKY
Sbjct: 121 RKAKSR--QVGKEKGKY 135
>BC070192-1|AAH70192.1| 145|Homo sapiens ribosomal protein L26-like
1 protein.
Length = 145
Score = 186 bits (453), Expect = 4e-47
Identities = 88/137 (64%), Positives = 107/137 (78%)
Frame = +2
Query: 23 MKYNKLVTSSRRKNRKRHFSAPSHIRRVLMSAPLSKELRQKFNVKSMPIRKDDEVQVVRG 202
MK+N VTS R KNRKRHF+APSH+RR +MS+PLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHVRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 203 HXXXXXXXXXXXXXXXXFVVYIERIQREKANGASVYVGIHPSKCVIVKLKMNKDRKTILD 382
H +V+YIER+QREKANG +V+VGIHPSK VI +LK++KDRK IL+
Sbjct: 61 HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120
Query: 383 RRASGRLAALGKDKGKY 433
R+A R +GK+KGKY
Sbjct: 121 RKAKSR--QVGKEKGKY 135
>BC017360-1|AAH17360.1| 145|Homo sapiens ribosomal protein L26-like
1 protein.
Length = 145
Score = 186 bits (453), Expect = 4e-47
Identities = 88/137 (64%), Positives = 107/137 (78%)
Frame = +2
Query: 23 MKYNKLVTSSRRKNRKRHFSAPSHIRRVLMSAPLSKELRQKFNVKSMPIRKDDEVQVVRG 202
MK+N VTS R KNRKRHF+APSH+RR +MS+PLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHVRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 203 HXXXXXXXXXXXXXXXXFVVYIERIQREKANGASVYVGIHPSKCVIVKLKMNKDRKTILD 382
H +V+YIER+QREKANG +V+VGIHPSK VI +LK++KDRK IL+
Sbjct: 61 HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120
Query: 383 RRASGRLAALGKDKGKY 433
R+A R +GK+KGKY
Sbjct: 121 RKAKSR--QVGKEKGKY 135
>L07287-1|AAA60279.1| 145|Homo sapiens ribosomal protein L26
protein.
Length = 145
Score = 184 bits (448), Expect = 2e-46
Identities = 88/137 (64%), Positives = 106/137 (77%)
Frame = +2
Query: 23 MKYNKLVTSSRRKNRKRHFSAPSHIRRVLMSAPLSKELRQKFNVKSMPIRKDDEVQVVRG 202
MK+N VTS R KNRKRHF+APSHIRR +MS+PLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 203 HXXXXXXXXXXXXXXXXFVVYIERIQREKANGASVYVGIHPSKCVIVKLKMNKDRKTILD 382
H +V+YIER+QREKANG +V+VGIHPSK VI +LK++KDRK IL+
Sbjct: 61 HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120
Query: 383 RRASGRLAALGKDKGKY 433
R+A R +GK+K KY
Sbjct: 121 RKAKSR--QVGKEKSKY 135
>BC126291-1|AAI26292.1| 265|Homo sapiens C-type lectin domain
family 12, member A protein.
Length = 265
Score = 31.5 bits (68), Expect = 1.9
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 112 VSTTLQRVKTKVQREIYANPQRRRSAGCTR 201
+STTLQ + TK+ RE+Y+ Q + C R
Sbjct: 106 LSTTLQTIATKLCRELYSKEQEHKCKPCPR 135
>BC126289-1|AAI26290.1| 265|Homo sapiens C-type lectin domain
family 12, member A protein.
Length = 265
Score = 31.5 bits (68), Expect = 1.9
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 112 VSTTLQRVKTKVQREIYANPQRRRSAGCTR 201
+STTLQ + TK+ RE+Y+ Q + C R
Sbjct: 106 LSTTLQTIATKLCRELYSKEQEHKCKPCPR 135
>BC063424-1|AAH63424.1| 213|Homo sapiens CLEC12A protein protein.
Length = 213
Score = 31.5 bits (68), Expect = 1.9
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 112 VSTTLQRVKTKVQREIYANPQRRRSAGCTR 201
+STTLQ + TK+ RE+Y+ Q + C R
Sbjct: 106 LSTTLQTIATKLCRELYSKEQEHKCKPCPR 135
>AY547296-1|AAT11783.1| 275|Homo sapiens C-type lectin-like
molecule-1 protein.
Length = 275
Score = 31.5 bits (68), Expect = 1.9
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 112 VSTTLQRVKTKVQREIYANPQRRRSAGCTR 201
+STTLQ + TK+ RE+Y+ Q + C R
Sbjct: 116 LSTTLQTIATKLCRELYSKEQEHKCKPCPR 145
>AY498551-1|AAS00606.1| 232|Homo sapiens myeloid inhibitory C-type
lectin-like receptor isoform beta protein.
Length = 232
Score = 31.5 bits (68), Expect = 1.9
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 112 VSTTLQRVKTKVQREIYANPQRRRSAGCTR 201
+STTLQ + TK+ RE+Y+ Q + C R
Sbjct: 73 LSTTLQTIATKLCRELYSKEQEHKCKPCPR 102
>AY498550-1|AAS00605.1| 265|Homo sapiens myeloid inhibitory C-type
lectin-like receptor isoform alpha protein.
Length = 265
Score = 31.5 bits (68), Expect = 1.9
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 112 VSTTLQRVKTKVQREIYANPQRRRSAGCTR 201
+STTLQ + TK+ RE+Y+ Q + C R
Sbjct: 106 LSTTLQTIATKLCRELYSKEQEHKCKPCPR 135
>AY426759-1|AAR84594.1| 265|Homo sapiens dendritic cell associated
lectin 2 protein.
Length = 265
Score = 31.5 bits (68), Expect = 1.9
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 112 VSTTLQRVKTKVQREIYANPQRRRSAGCTR 201
+STTLQ + TK+ RE+Y+ Q + C R
Sbjct: 106 LSTTLQTIATKLCRELYSKEQEHKCKPCPR 135
>AF247788-1|AAL95693.1| 265|Homo sapiens C-type lectin protein
CLL-1 protein.
Length = 265
Score = 31.5 bits (68), Expect = 1.9
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 112 VSTTLQRVKTKVQREIYANPQRRRSAGCTR 201
+STTLQ + TK+ RE+Y+ Q + C R
Sbjct: 106 LSTTLQTIATKLCRELYSKEQEHKCKPCPR 135
>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
marker CA125 protein.
Length = 22152
Score = 30.7 bits (66), Expect = 3.3
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +1
Query: 94 HPTSTYVSTTLQRVKTKVQREIYANPQ-RRRSAGCTRTL*RPAGGQSSTGVP*EVCSLHR 270
HP S +TT +RV + + ++ N +GC TL RP +++TGV +C+ HR
Sbjct: 13656 HPGSRKFNTT-ERVLQGLLKPLFKNTSVGPLYSGCRLTLLRPEKHEAATGVD-TICT-HR 13712
Query: 271 KDP 279
DP
Sbjct: 13713 VDP 13715
Score = 30.7 bits (66), Expect = 3.3
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +1
Query: 94 HPTSTYVSTTLQRVKTKVQREIYANPQ-RRRSAGCTRTL*RPAGGQSSTGVP*EVCSLHR 270
HP S +TT +RV + + ++ N +GC TL RP +++TGV +C+ HR
Sbjct: 13812 HPGSRKFNTT-ERVLQGLLKPLFKNTSVGPLYSGCRLTLLRPEKHEAATGVD-TICT-HR 13868
Query: 271 KDP 279
DP
Sbjct: 13869 VDP 13871
Score = 29.5 bits (63), Expect = 7.6
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +1
Query: 94 HPTSTYVSTTLQRVKTKVQREIYANPQ-RRRSAGCTRTL*RPAGGQSSTGVP*EVCSLHR 270
HP S +TT +RV + ++ N +GC TL RP +++TGV +C+ HR
Sbjct: 17088 HPGSRKFNTT-ERVLQGLLTPLFKNTSVGPLYSGCRLTLLRPEKQEAATGVD-TICT-HR 17144
Query: 271 KDP 279
DP
Sbjct: 17145 VDP 17147
Score = 29.5 bits (63), Expect = 7.6
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +1
Query: 94 HPTSTYVSTTLQRVKTKVQREIYANPQ-RRRSAGCTRTL*RPAGGQSSTGVP*EVCSLHR 270
HP S +TT +RV + ++ N +GC TL RP +++TGV +C+ HR
Sbjct: 18336 HPGSRKFNTT-ERVLQGLLTPLFKNTSVGPLYSGCRLTLLRPEKQEAATGVD-TICT-HR 18392
Query: 271 KDP 279
DP
Sbjct: 18393 VDP 18395
>AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein.
Length = 6995
Score = 30.7 bits (66), Expect = 3.3
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +1
Query: 94 HPTSTYVSTTLQRVKTKVQREIYANPQ-RRRSAGCTRTL*RPAGGQSSTGVP*EVCSLHR 270
HP S +TT +RV + + ++ N +GC TL RP +++TGV +C+ HR
Sbjct: 5050 HPGSRKFNTT-ERVLQGLLKPLFKNTSVGPLYSGCRLTLLRPEKQEAATGVD-TICT-HR 5106
Query: 271 KDP 279
DP
Sbjct: 5107 VDP 5109
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,202,159
Number of Sequences: 237096
Number of extensions: 1471205
Number of successful extensions: 3363
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3363
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5103531180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -