Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_L06
         (589 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             28   0.059
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    23   2.9  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    22   3.9  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    22   3.9  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 28.3 bits (60), Expect = 0.059
 Identities = 15/65 (23%), Positives = 25/65 (38%)
 Frame = -2

Query: 576 LEDEVSTHSIPRPSTPDSNNTETSLCRMASCSVLKIIDSLESEQQKERHHKTEETHSLRQ 397
           L    S+ S+P   T  +  T T+    A+ +       ++ E  +  HH     H L+ 
Sbjct: 94  LHPPASSTSLPATITTTTTTTTTTTATAAATATTTATGLIKQETLQRHHHLQNHHHHLQS 153

Query: 396 GETQD 382
              QD
Sbjct: 154 TAVQD 158



 Score = 22.2 bits (45), Expect = 3.9
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = -2

Query: 456 ESEQQKERHHKTEETHSLRQGETQDGI*EQLLFKGG 349
           + +QQ++R  + +E   LR  E +  + E     GG
Sbjct: 165 QQQQQQQRQQQRQEERRLRPDEIKVEVGEDEFANGG 200


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +3

Query: 414 SLLSYDGVPSVVRFLS 461
           ++L YDGVPS +  +S
Sbjct: 80  TILRYDGVPSTLNVIS 95


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 144 CEWSHKSCVAEDSSPGCRGDQSC 76
           C+   K  V +D S  CR ++SC
Sbjct: 130 CKGFFKRTVRKDLSYACREEKSC 152


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 144 CEWSHKSCVAEDSSPGCRGDQSC 76
           C+   K  V +D S  CR ++SC
Sbjct: 130 CKGFFKRTVRKDLSYACREEKSC 152


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,361
Number of Sequences: 438
Number of extensions: 3133
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17115420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)