Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_L03
(495 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 63 9e-11
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 61 5e-10
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 50 9e-07
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans... 33 0.086
AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical ... 33 0.086
U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical pr... 33 0.11
AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical ... 33 0.15
Z71262-5|CAA95818.1| 606|Caenorhabditis elegans Hypothetical pr... 28 3.2
AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical ... 28 4.3
U53139-13|AAK18939.1| 334|Caenorhabditis elegans Hypothetical p... 27 5.7
AB275892-1|BAF34315.1| 334|Caenorhabditis elegans D-aspartate o... 27 5.7
AF043706-1|AAB97603.3| 1623|Caenorhabditis elegans Hypothetical ... 27 9.9
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 63.3 bits (147), Expect = 9e-11
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 2/141 (1%)
Frame = +1
Query: 43 QYVAVVLLDMEKAFDKVWHQGMLYKLLTTTTIPRKILHVLKSFLEDRRAQVVVEGQVSRE 222
+ + ++ LD KAFD++ H +L KL++ + +L + FL +R +V + +S
Sbjct: 12 EQIDIIYLDFSKAFDRLPHDLLLDKLVSLRK-NKNLLIWVNEFLSNRSFRVRIGQTLSSR 70
Query: 223 FPMRAGVPQGSCLSPSLYAVYTNDMPVRGWTELAL--FADDAAYFHVDNTPLDAQIETQR 396
GVPQG+ LSP L+ +Y ND+ ++A FADD + +++ Q
Sbjct: 71 KFATCGVPQGAVLSPLLFGIYVNDISSILPEKVACKQFADDTK-LYASTPKTESENNLQS 129
Query: 397 LLDTLPEWLRRWRLRANVGKT 459
LD + +W + +L N KT
Sbjct: 130 ALDAVVDWTKGSKLTLNQSKT 150
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 60.9 bits (141), Expect = 5e-10
Identities = 38/121 (31%), Positives = 60/121 (49%)
Frame = +1
Query: 64 LDMEKAFDKVWHQGMLYKLLTTTTIPRKILHVLKSFLEDRRAQVVVEGQVSREFPMRAGV 243
LD+ AFDKV + + L+ I KI L ++L R + + S+ + GV
Sbjct: 474 LDLRAAFDKVPTKKLCNDLMEAQGIEPKIKLWLGNYLHKRLIRTSHDNHWSKWHTLLGGV 533
Query: 244 PQGSCLSPSLYAVYTNDMPVRGWTELALFADDAAYFHVDNTPLDAQIETQRLLDTLPEWL 423
PQGS +SP+L+ Y DMP + T L +ADD + D A + Q +D + ++L
Sbjct: 534 PQGSVISPNLFTFYLKDMPTQQDTMLISYADDMSIIARDKKIEKAAEKVQLHIDEIAKYL 593
Query: 424 R 426
+
Sbjct: 594 K 594
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 50.0 bits (114), Expect = 9e-07
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Frame = +1
Query: 163 KSFLEDRRAQVVVEGQVSRE-FPMRAGVPQGSCLSPSLYAVYTNDM--PVRGWTELALFA 333
K FLE+R V + VS+ +P+ +GVPQGS P L+ ++ N++ + ++ FA
Sbjct: 854 KEFLENRTFSVKINKFVSKNSYPISSGVPQGSVSGPLLFILFINNLLIDLAPTINISCFA 913
Query: 334 DDAAYFHVDNTPLDAQIE 387
DD FH D T + I+
Sbjct: 914 DDVKIFHTDPTIIQNSID 931
>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
transcriptase protein.
Length = 1066
Score = 33.5 bits (73), Expect = 0.086
Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
Frame = +1
Query: 16 IIDTARRNRQYVAVVLLDMEKAFDKVWHQGMLYKLLTTTTIPRKILHVLKSFLEDRRAQV 195
+++ R + + +V +D +KAFD V HQ ++K L + +LK ++
Sbjct: 675 LLEVGREYQIPLTLVFIDFKKAFDSVEHQA-IWKSLDEQGADGAYIDLLKECYKNCTTNF 733
Query: 196 VVEGQVSREFPMRAGVPQGSCLSPSLY-AVYTNDMPVRGWTELALFADD 339
+ P+ GV QG +SP+L+ A + W EL A+D
Sbjct: 734 TPFHR-PVAVPVTKGVRQGDPISPNLFSACLEHVFRKLSWIELKGEAED 781
>AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical
protein K10F12.5 protein.
Length = 805
Score = 33.5 bits (73), Expect = 0.086
Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
Frame = +1
Query: 16 IIDTARRNRQYVAVVLLDMEKAFDKVWHQGMLYKLLTTTTIPRKILHVLKSFLEDRRAQV 195
+++ R + + +V +D +KAFD V HQ ++K L + +LK ++
Sbjct: 414 LLEVGREYQIPLTLVFIDFKKAFDSVEHQA-IWKSLDEQGADGAYIDLLKECYKNCTTNF 472
Query: 196 VVEGQVSREFPMRAGVPQGSCLSPSLY-AVYTNDMPVRGWTELALFADD 339
+ P+ GV QG +SP+L+ A + W EL A+D
Sbjct: 473 TPFHR-PVAVPVTKGVRQGDPISPNLFSACLEHVFRKLSWIELKGEAED 520
>U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical
protein F20B4.7 protein.
Length = 891
Score = 33.1 bits (72), Expect = 0.11
Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
Frame = +1
Query: 16 IIDTARRNRQYVAVVLLDMEKAFDKVWHQGMLYKLLTTTTIPRKILHVLKSFLEDRRAQV 195
+++ R + + +V +D +KAFD V HQ ++K L + +LK ++
Sbjct: 504 LLEVGREYQIPLTLVFIDFKKAFDTVEHQA-IWKSLDEQGADGAYIDLLKECYKNCTTNF 562
Query: 196 VVEGQVSREFPMRAGVPQGSCLSPSLY-AVYTNDMPVRGWTELALFADD 339
+ P+ GV QG +SP+L+ A + W EL A+D
Sbjct: 563 TPFHR-PVAVPVTKGVRQGDPISPNLFSACLEHVFRKLSWIELKGEAED 610
>AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical
protein Y32G9A.9 protein.
Length = 417
Score = 32.7 bits (71), Expect = 0.15
Identities = 25/92 (27%), Positives = 43/92 (46%)
Frame = +1
Query: 4 RGIDIIDTARRNRQYVAVVLLDMEKAFDKVWHQGMLYKLLTTTTIPRKILHVLKSFLEDR 183
R D + +A R + +V +D +KAFD V HQ ++K L + +LK ++
Sbjct: 23 RSKDFLKSAGNTRS-LTLVFIDFKKAFDSVEHQA-IWKSLDEQGADEAYIDLLKECYKNC 80
Query: 184 RAQVVVEGQVSREFPMRAGVPQGSCLSPSLYA 279
+ P+ GV QG +SP+L++
Sbjct: 81 TTNFTPFLR-PITVPVTKGVRQGDPISPNLFS 111
>Z71262-5|CAA95818.1| 606|Caenorhabditis elegans Hypothetical
protein F22D6.6 protein.
Length = 606
Score = 28.3 bits (60), Expect = 3.2
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +1
Query: 82 FDKVWHQGMLYKLLTTTTIPRKILHVLKSFLEDRRAQVVVEGQVSRE 222
FD +HQ ++++ TIP + L + +SF D + + E Q+ E
Sbjct: 255 FDAAYHQ--VFEVAERETIPNEALEIHRSFPTDWKKTSISEDQMKEE 299
>AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical
protein M151.2 protein.
Length = 675
Score = 27.9 bits (59), Expect = 4.3
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2
Query: 431 HLRSHSGRVSSSRWVSICASNGVLSTW 351
HL H RVS + + ASNG S W
Sbjct: 598 HLNEHRTRVSRAAGQCVAASNGFCSQW 624
>U53139-13|AAK18939.1| 334|Caenorhabditis elegans Hypothetical
protein F18E3.7a protein.
Length = 334
Score = 27.5 bits (58), Expect = 5.7
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 85 DKVWHQGMLYKLLTTTTIPRKILHVLKSFLEDRR 186
D WH+ Y+ TT TIP++ V+ S +D R
Sbjct: 209 DAPWHKHFNYRDFTTFTIPKEHSVVVGSTKQDNR 242
>AB275892-1|BAF34315.1| 334|Caenorhabditis elegans D-aspartate
oxidase protein.
Length = 334
Score = 27.5 bits (58), Expect = 5.7
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 85 DKVWHQGMLYKLLTTTTIPRKILHVLKSFLEDRR 186
D WH+ Y+ TT TIP++ V+ S +D R
Sbjct: 209 DAPWHKHFNYRDFTTFTIPKEHSVVVGSTKQDNR 242
>AF043706-1|AAB97603.3| 1623|Caenorhabditis elegans Hypothetical
protein ZC123.3 protein.
Length = 1623
Score = 26.6 bits (56), Expect = 9.9
Identities = 11/30 (36%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +1
Query: 346 YFHVDNTPLDAQIETQRLLDTLPE-WLRRW 432
YF+++N+P +AQI+ +LPE ++ W
Sbjct: 881 YFNINNSPSEAQIKEMSQKASLPEKVIKHW 910
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,069,212
Number of Sequences: 27780
Number of extensions: 220445
Number of successful extensions: 703
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 702
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 935344784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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