Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_K23
(412 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomy... 177 7e-46
SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomy... 89 2e-19
SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha 3|Sch... 83 1e-17
SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyc... 79 2e-16
SPCC1795.04c |||20S proteasome component alpha 7|Schizosaccharom... 77 8e-16
SPBC646.16 |||20S proteasome component alpha 1|Schizosaccharomyc... 70 2e-13
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 54 1e-08
SPAC4A8.13c |pts1||20S proteasome component beta 5|Schizosacchar... 53 2e-08
SPAC3A11.02 |cps3|mug188|zinc finger protein Cps3|Schizosaccharo... 27 0.86
SPAPB2B4.04c ||pmc1, pmc1|P-type ATPase, calcium transporting Pm... 25 3.5
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 25 6.1
SPCC1620.04c |mug55||Cdc20/Fizzy family WD repeat protein|Schizo... 24 8.0
SPBC2D10.14c |myo51||myosin type V|Schizosaccharomyces pombe|chr... 24 8.0
SPBC16E9.11c |pub3||ubiquitin-protein ligase E3|Schizosaccharomy... 24 8.0
SPBC1718.07c |zfs1|moc4|transcription factor Zfs1 |Schizosacchar... 24 8.0
>SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 247
Score = 177 bits (430), Expect = 7e-46
Identities = 76/135 (56%), Positives = 105/135 (77%)
Frame = +2
Query: 8 ATAIGISTSEGVVLAVEKRITSPLMEPTTIEKIVEVDRHIACAVSGLMADSRTLVERARV 187
+TAIG+ T + VVL VEKR+TSPLME ++EK+ E+D HI CA+SGL AD+RT++E ARV
Sbjct: 35 STAIGVKTKDAVVLGVEKRLTSPLMESHSVEKLFEIDSHIGCAISGLTADARTIIEHARV 94
Query: 188 ECQNHWFVYNERMSVESCAQAVSNLAIQFGDSDDDSGTAMSRPFGVAVMFAGIDEKGPQL 367
+ QNH F Y+E +ES Q++ +LA++FG+ +D MSRPFGVA++ AGIDE GPQL
Sbjct: 95 QTQNHRFTYDEPQGIESTTQSICDLALRFGEGEDGEERIMSRPFGVALLIAGIDEHGPQL 154
Query: 368 FHMDPSGTFVQYDAK 412
+H +PSGT+ +Y+AK
Sbjct: 155 YHSEPSGTYFRYEAK 169
>SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 245
Score = 89.4 bits (212), Expect = 2e-19
Identities = 49/134 (36%), Positives = 78/134 (58%), Gaps = 1/134 (0%)
Frame = +2
Query: 11 TAIGISTSEGVVLAVEKRITSPLMEPTTIEKIVEVDRHIACAVSGLMADSRTLVERARVE 190
T++GI ++GVVLA EK+ TS L ++EK+ + I SG+ D R LV+++R
Sbjct: 33 TSVGIKATDGVVLATEKKPTSELAIGASLEKVCAITPDIGMVYSGMGPDFRVLVDKSRKV 92
Query: 191 CQNHWF-VYNERMSVESCAQAVSNLAIQFGDSDDDSGTAMSRPFGVAVMFAGIDEKGPQL 367
Q + +YNE + Q ++++ +S G RPFGV+++ AG+DEKGP L
Sbjct: 93 AQTTYKKIYNEYPPTKILVQEIASV---MQESTQSGGV---RPFGVSLLVAGMDEKGPSL 146
Query: 368 FHMDPSGTFVQYDA 409
+ +DPSGT+ + A
Sbjct: 147 YQVDPSGTYFAWKA 160
>SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 248
Score = 83.4 bits (197), Expect = 1e-17
Identities = 49/138 (35%), Positives = 76/138 (55%), Gaps = 2/138 (1%)
Frame = +2
Query: 2 HEATAIGISTSEGVVLAVEKRITSPLMEPT-TIEKIVEVDRHIACAVSGLMADSRTLVER 178
H A+GI +G+VLA EK++TS L+E + EK+ + ++ CAV+GL AD+ L+
Sbjct: 30 HAGVALGIVAKDGIVLAAEKKVTSKLLEQEESAEKLYHIGDNMLCAVAGLTADANILINY 89
Query: 179 ARVECQNHWFVYNERMSVESCAQAVSNLAIQFGDSDDDSGTAMSRPFGVAVMFAGIDE-K 355
AR Q + +NE M E + V +L + + RPFGV+ ++AG D +
Sbjct: 90 ARRVGQQYLQTFNEEMPCEQLVRRVCDLKQGY------TQYGGLRPFGVSFLYAGWDHIR 143
Query: 356 GPQLFHMDPSGTFVQYDA 409
G QLF +PSG + + A
Sbjct: 144 GYQLFQSNPSGNYGSWQA 161
>SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 259
Score = 79.4 bits (187), Expect = 2e-16
Identities = 44/135 (32%), Positives = 76/135 (56%), Gaps = 2/135 (1%)
Frame = +2
Query: 11 TAIGISTSEGVVLAVEKRITSPLMEPTTIEKIVEVDRHIACAVSGLMADSRTLVERARVE 190
TAI + +E +V+ VE++ L + +KI VD H+ A +GL AD+R L+++ARVE
Sbjct: 32 TAIALRGNECIVIGVERKNVPKLQNVSNFQKIAMVDNHVCLAFAGLNADARILIDKARVE 91
Query: 191 CQNHWFVYNERMSVESCAQAVSNLAIQFGDSDDDSGTAMSRPFGVAVMFAGID--EKGPQ 364
QNH + +S+E + V+ + ++ S G RPFGV+ + AG D + P+
Sbjct: 92 AQNHKLNLADPVSIEYLTRYVAGVQQKYTQS---GGV---RPFGVSTLIAGFDVGDNTPR 145
Query: 365 LFHMDPSGTFVQYDA 409
++ +P+G + + A
Sbjct: 146 VYQTEPAGIYNAWKA 160
>SPCC1795.04c |||20S proteasome component alpha
7|Schizosaccharomyces pombe|chr 3|||Manual
Length = 253
Score = 77.4 bits (182), Expect = 8e-16
Identities = 45/133 (33%), Positives = 70/133 (52%)
Frame = +2
Query: 8 ATAIGISTSEGVVLAVEKRITSPLMEPTTIEKIVEVDRHIACAVSGLMADSRTLVERARV 187
+T IGI +GV+LA+EK +TS L++P +I VDRHI A +G + D + +V+RAR
Sbjct: 34 STCIGIKCEDGVILALEKVVTSKLLKPRVNNRIGSVDRHIGIATTGFIPDGQHIVKRARD 93
Query: 188 ECQNHWFVYNERMSVESCAQAVSNLAIQFGDSDDDSGTAMSRPFGVAVMFAGIDEKGPQL 367
E + Y + A + N F + + RPFGV A D +GP L
Sbjct: 94 EATSWRDNYGSPIPGTVIADRLGNYVQLF------TCYSSVRPFGVMSFVATYDSEGPHL 147
Query: 368 FHMDPSGTFVQYD 406
+ ++P+G + Y+
Sbjct: 148 YMVEPNGVYWGYN 160
>SPBC646.16 |||20S proteasome component alpha 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 244
Score = 69.7 bits (163), Expect = 2e-13
Identities = 36/134 (26%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
Frame = +2
Query: 11 TAIGISTSEGVVLAVEKRITSPLMEPTTIEKIVEVDRHIACAVSGLMADSRTLVERARVE 190
T++G++ + +K++ L++ +T++ + + + I C ++G +AD+R V RAR E
Sbjct: 36 TSVGVTGKNCACVISQKKVPDKLIDASTVKHVFPITKGIGCVMTGSIADARAQVSRARSE 95
Query: 191 CQNHWFVYNERMSVESCAQAVSNLAIQFGDSDDDSGTAMSRPFGVAVMFAGIDEK-GPQL 367
+ M + A+ ++N+A + A RP GVA+ +D++ GP L
Sbjct: 96 AAEFEYKNGYPMPCDVLAKRMANIA------QVSTQRAAMRPLGVAMTLVAVDDEIGPSL 149
Query: 368 FHMDPSGTFVQYDA 409
F +DP+G ++ Y A
Sbjct: 150 FKLDPAGFYIGYKA 163
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 53.6 bits (123), Expect = 1e-08
Identities = 35/132 (26%), Positives = 61/132 (46%)
Frame = +2
Query: 8 ATAIGISTSEGVVLAVEKRITSPLMEPTTIEKIVEVDRHIACAVSGLMADSRTLVERARV 187
+ +G+ + VL KR L +K++ +D HI A++GL D+R L +
Sbjct: 33 SATVGLVSKTHAVLVALKRNAEELSSYQ--KKLIRIDDHIGIAIAGLAPDARVLSNYMKQ 90
Query: 188 ECQNHWFVYNERMSVESCAQAVSNLAIQFGDSDDDSGTAMSRPFGVAVMFAGIDEKGPQL 367
E + ++ + V + +S +A + + + G RP+GV + G DE GP L
Sbjct: 91 EALSSKTLFTRPIPVR---RLMSKVAEKAQINTQEYGR---RPYGVGFLVIGYDESGPHL 144
Query: 368 FHMDPSGTFVQY 403
PSG ++Y
Sbjct: 145 LEFQPSGLVLEY 156
>SPAC4A8.13c |pts1||20S proteasome component beta
5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 52.8 bits (121), Expect = 2e-08
Identities = 33/136 (24%), Positives = 68/136 (50%), Gaps = 1/136 (0%)
Frame = +2
Query: 2 HEATAIGISTSEGVVLAVEKRITS-PLMEPTTIEKIVEVDRHIACAVSGLMADSRTLVER 178
H T + G+V+ V+ R ++ PL+ T++K++E++ ++ ++G AD +
Sbjct: 60 HGTTTLAFRYQHGIVVCVDSRASAGPLIASQTVKKVIEINPYLLGTLAGGAADCQFWETV 119
Query: 179 ARVECQNHWFVYNERMSVESCAQAVSNLAIQFGDSDDDSGTAMSRPFGVAVMFAGIDEKG 358
+EC+ H E +SV + ++ +SN+ + G +S + M AG + G
Sbjct: 120 LGMECRLHQLRNKELISVSAASKILSNITYSY------KGYGLS----MGTMLAGTGKGG 169
Query: 359 PQLFHMDPSGTFVQYD 406
L+++D GT ++ D
Sbjct: 170 TALYYIDSDGTRLKGD 185
>SPAC3A11.02 |cps3|mug188|zinc finger protein
Cps3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 583
Score = 27.5 bits (58), Expect = 0.86
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = -2
Query: 339 ANITATPNGLDIAVPLSSSLS-PN*IARLDTACAQDSTLIL 220
+ +TATP+ L+ PLSS S PN I+ L T+ + S+ L
Sbjct: 345 STLTATPSSLENLYPLSSRRSVPNLISSLGTSPSTFSSQFL 385
>SPAPB2B4.04c ||pmc1, pmc1|P-type ATPase, calcium transporting Pmc1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1292
Score = 25.4 bits (53), Expect = 3.5
Identities = 27/108 (25%), Positives = 46/108 (42%)
Frame = -2
Query: 348 SIPANITATPNGLDIAVPLSSSLSPN*IARLDTACAQDSTLILSLYTNQ*FWHSTRARST 169
S+ + A P GL +AV L+ + + N R+ +D+ L+ L + T +T
Sbjct: 493 SVTLLVVAVPEGLPLAVTLALAFATN---RMQ----KDNNLVRHLQACE-----TMGTAT 540
Query: 168 NVLESAIRPDTAQAMCRSTSTIFSIVVGSIRGDVILFSTANTTPSDVD 25
N+ T M ++V G DV+ F + TP++VD
Sbjct: 541 NICSDKTGTLTQNRM--------TVVAGGFGTDVLFFDHNDETPTNVD 580
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 24.6 bits (51), Expect = 6.1
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = -2
Query: 294 LSSSLSPN*IARLDTACAQDSTLILSLYTNQ*FWHSTRARSTNVLESAIRPDTAQAMCRS 115
+SS+L P+ A + STL SLY + + STN ++ T + S
Sbjct: 769 ISSNL-PSATASSQSQLTNSSTLATSLYLSSSSSRTISTSSTNEYNTSFHAPTVSSTTSS 827
Query: 114 TST 106
+ST
Sbjct: 828 SST 830
>SPCC1620.04c |mug55||Cdc20/Fizzy family WD repeat
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 509
Score = 24.2 bits (50), Expect = 8.0
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = -1
Query: 133 TSDVSVHFYDFFNSSRFHQRRC 68
++D ++FYD F R H C
Sbjct: 353 SNDQQIYFYDTFRGHRIHSLFC 374
>SPBC2D10.14c |myo51||myosin type V|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1471
Score = 24.2 bits (50), Expect = 8.0
Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Frame = +2
Query: 161 RTLVERARVECQNHWFVYNER---MSVESCAQAVSNL 262
R +ERA + Q HW Y +R +S+ CA + ++
Sbjct: 797 REKIERAAILIQAHWRSYIQRKRYLSLIKCAIVIQSI 833
>SPBC16E9.11c |pub3||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 786
Score = 24.2 bits (50), Expect = 8.0
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = -3
Query: 278 HQTE*RDWTRPAHKTLHSFSHCTQTSDSGIPHEHAQLMSWNQP 150
H T WTRPA T + H T + + H++ L + P
Sbjct: 257 HNTRTTTWTRPASST--NPVHNTSSDSQRLNHQNRHLPDDSNP 297
>SPBC1718.07c |zfs1|moc4|transcription factor Zfs1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 404
Score = 24.2 bits (50), Expect = 8.0
Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
Frame = +2
Query: 131 CAVSGLMADSRTLVERARVECQNHW---FVYNERMSVESCAQAVSNLAIQFGDSDDDSGT 301
C S M + R V + + Q+H S S A SNL+ QF S + T
Sbjct: 224 CVQSKSMTNIRNSVAKPSLVRQSHSAGVIPIKPTASNASIRNAPSNLSKQFSPSGNSPLT 283
Query: 302 AMSRPF 319
S+PF
Sbjct: 284 EASKPF 289
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,850,204
Number of Sequences: 5004
Number of extensions: 37499
Number of successful extensions: 126
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 118
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 142254980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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