Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_K23
(412 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical pr... 173 4e-44
Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical pr... 93 7e-20
AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome al... 76 9e-15
Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical pr... 67 5e-12
Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical pr... 62 1e-10
AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome al... 59 1e-09
Z81564-1|CAB04567.1| 284|Caenorhabditis elegans Hypothetical pr... 36 0.015
U55855-2|AAA98018.1| 204|Caenorhabditis elegans Proteasome beta... 33 0.11
L14745-10|AAK71356.1| 258|Caenorhabditis elegans Proteasome bet... 31 0.25
AF303265-1|AAG50223.1| 258|Caenorhabditis elegans proteasome co... 31 0.25
Z92825-3|CAB07311.1| 531|Caenorhabditis elegans Hypothetical pr... 27 4.0
Z49968-7|CAE17874.1| 91|Caenorhabditis elegans Hypothetical pr... 27 7.0
AF039037-1|AAO21431.1| 312|Caenorhabditis elegans Hypothetical ... 27 7.0
AC006675-11|AAK84552.1| 326|Caenorhabditis elegans Serpentine r... 27 7.0
Z47070-3|CAA87341.1| 528|Caenorhabditis elegans Hypothetical pr... 26 9.2
U80453-12|AAN63454.1| 419|Caenorhabditis elegans Hypothetical p... 26 9.2
U80453-11|AAN63452.2| 503|Caenorhabditis elegans Hypothetical p... 26 9.2
U80453-10|AAN63453.1| 489|Caenorhabditis elegans Hypothetical p... 26 9.2
U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical pr... 26 9.2
U64605-4|AAF98600.1| 249|Caenorhabditis elegans Hypothetical pr... 26 9.2
>Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical
protein F25H2.9 protein.
Length = 248
Score = 173 bits (421), Expect = 4e-44
Identities = 82/135 (60%), Positives = 105/135 (77%)
Frame = +2
Query: 8 ATAIGISTSEGVVLAVEKRITSPLMEPTTIEKIVEVDRHIACAVSGLMADSRTLVERARV 187
+T+IGI TSEGV+LA EKR TS LM IEKI +VD+HI +GL+ADSRTLVERA++
Sbjct: 35 STSIGIKTSEGVLLAAEKRSTSKLMVNDAIEKISKVDQHIGVTFAGLIADSRTLVERAQI 94
Query: 188 ECQNHWFVYNERMSVESCAQAVSNLAIQFGDSDDDSGTAMSRPFGVAVMFAGIDEKGPQL 367
E QN WF YN ++ VE Q+V+NLA+QFG DDD +MSRPFGVA++FAG+D++G +L
Sbjct: 95 EAQNFWFTYNRKIRVEDVTQSVANLALQFG--DDDVKASMSRPFGVAMLFAGVDQEGAKL 152
Query: 368 FHMDPSGTFVQYDAK 412
FH+DPSGTF+ AK
Sbjct: 153 FHLDPSGTFIDCKAK 167
>Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical
protein C36B1.4 protein.
Length = 253
Score = 93.1 bits (221), Expect = 7e-20
Identities = 47/135 (34%), Positives = 79/135 (58%), Gaps = 1/135 (0%)
Frame = +2
Query: 8 ATAIGISTSEGVVLAVEKRITSPLMEPTTIEKIVEVDRHIACAVSGLMADSRTLVERARV 187
+TA+G+ + +V+ VEK+ L + TI KI +D H+ A +GL AD+R LV+RAR+
Sbjct: 31 STAVGVRGKDCIVIGVEKKSIPALQDDRTIRKIHMIDDHVMLAFAGLSADARVLVDRARI 90
Query: 188 ECQNHWFVYNERMSVESCAQAVSNLAIQFGDSDDDSGTAMSRPFGVAVMFAGIDEKG-PQ 364
ECQ++ + ++V ++ ++N +F S RPFG++++ G D G P+
Sbjct: 91 ECQSYKLTLEDPVTVAYISRYIANTKQRFTQSPG------RRPFGISMLIGGFDHDGTPR 144
Query: 365 LFHMDPSGTFVQYDA 409
LF +PSG + +Y A
Sbjct: 145 LFKTEPSGAYYEYVA 159
>AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome alpha
subunit protein 3 protein.
Length = 250
Score = 76.2 bits (179), Expect = 9e-15
Identities = 45/138 (32%), Positives = 75/138 (54%), Gaps = 2/138 (1%)
Frame = +2
Query: 2 HEATAIGISTSEGVVLAVEKRITSPLMEPTTI-EKIVEVDRHIACAVSGLMADSRTLVER 178
H T +GI +SEG+V+A E++ L++ + + EK+ + +I+C V+G+ AD+ L+
Sbjct: 30 HAGTCLGILSSEGIVVAAERKNVHKLLDDSVMTEKVYRLSDNISCTVAGITADANILINH 89
Query: 179 ARVECQNHWFVYNERMSVESCAQAVSNLAIQFGDSDDDSGTAMSRPFGVAVMFAGIDEK- 355
R ++ Y E M VE Q V NL + + RPFGV++++ G D+
Sbjct: 90 LRWWAASYRNSYGEEMPVE---QLVQNLC---NEKQRYTQIGGKRPFGVSLLYIGWDKHY 143
Query: 356 GPQLFHMDPSGTFVQYDA 409
G QL+ DPSG + + A
Sbjct: 144 GYQLYQSDPSGNYTGWKA 161
>Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical
protein D1054.2 protein.
Length = 231
Score = 66.9 bits (156), Expect = 5e-12
Identities = 43/134 (32%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
Frame = +2
Query: 14 AIGISTSEGVVLAVEKRITSPLMEPTTIEKIVEVDRHIACAVSGLMADSRTLVERARVEC 193
++G+ +GVVLA E + S L + K+ ++ +HI C SG+ D R LV++AR
Sbjct: 34 SVGLRAKDGVVLATEN-VGSVLTDDQP--KVEQISKHIGCVYSGMGPDFRILVKKARKIA 90
Query: 194 QNHWFVYNERMSVESCAQAVSNLAIQFGDSDDDSGTAMSRPFGVAVMFAGIDEK--GPQL 367
+ +Y E M Q V+++A + G RPFG +++ AG D+ P L
Sbjct: 91 MEYEMMYGEEMPT---IQLVTDIAAVMQEYTQSGGV---RPFGASLLIAGWDKNPGRPLL 144
Query: 368 FHMDPSGTFVQYDA 409
F DPSG + + A
Sbjct: 145 FQCDPSGAYFAWKA 158
>Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical
protein C15H11.7 protein.
Length = 246
Score = 62.5 bits (145), Expect = 1e-10
Identities = 32/129 (24%), Positives = 69/129 (53%), Gaps = 1/129 (0%)
Frame = +2
Query: 11 TAIGISTSEGVVLAVEKRITSPLMEPTTIEKIVEVDRHIACAVSGLMADSRTLVERARVE 190
TA+ + ++ V+AV+KR+ L+ T+ + ++ + + C G++ D++ ++RA+ E
Sbjct: 38 TAVAVKGADAAVIAVQKRVPDSLIVADTVTSVYQISQSVGCCAIGMIPDAKFQIKRAQGE 97
Query: 191 CQNHWFVYNERMSVESCAQAVSNLAIQFGDSDDDSGTAMSRPFGVAVMFAGI-DEKGPQL 367
+ + M E A+ +++L + + A R G A++F DEKGP++
Sbjct: 98 AASWKYKNGYDMPCELLAKKMADLNQYY------TQNAEMRSLGCALLFISYDDEKGPEV 151
Query: 368 FHMDPSGTF 394
+ +DP+G +
Sbjct: 152 YRVDPAGYY 160
>AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome alpha
subunit protein 6 protein.
Length = 260
Score = 59.3 bits (137), Expect = 1e-09
Identities = 34/130 (26%), Positives = 64/130 (49%)
Frame = +2
Query: 8 ATAIGISTSEGVVLAVEKRITSPLMEPTTIEKIVEVDRHIACAVSGLMADSRTLVERARV 187
+ +GI + V+ KR + L +K+ E+D H +++GL++D R L +
Sbjct: 33 SATVGIKSETHAVIVALKRAQNDLSSHQ--KKVYEIDTHAGVSIAGLLSDGRILARYLQT 90
Query: 188 ECQNHWFVYNERMSVESCAQAVSNLAIQFGDSDDDSGTAMSRPFGVAVMFAGIDEKGPQL 367
EC + + Y + + ++ A+++ L +Q ++ RPFGV ++ AG D+ G +
Sbjct: 91 ECSSWRWDYKQAVPIKKLAESM-QLKLQ-----ANTQYYGRRPFGVGILIAGYDKDGAHI 144
Query: 368 FHMDPSGTFV 397
DPS V
Sbjct: 145 IQTDPSAEVV 154
>Z81564-1|CAB04567.1| 284|Caenorhabditis elegans Hypothetical
protein K05C4.1 protein.
Length = 284
Score = 35.5 bits (78), Expect = 0.015
Identities = 27/118 (22%), Positives = 54/118 (45%), Gaps = 1/118 (0%)
Frame = +2
Query: 38 GVVLAVEKRITS-PLMEPTTIEKIVEVDRHIACAVSGLMADSRTLVERARVECQNHWFVY 214
G+++AV+ R +S + ++ KI+++ + ++G AD + C +
Sbjct: 82 GIIVAVDSRASSGEYISSKSVMKILDIGDRMVATMAGGAADCQFWTRIVAKYCTLYELRE 141
Query: 215 NERMSVESCAQAVSNLAIQFGDSDDDSGTAMSRPFGVAVMFAGIDEKGPQLFHMDPSG 388
++V + ++ +N + G +S V M AG D+KGPQ+F +D G
Sbjct: 142 KTSITVSAASKYFANTLYGY------RGQGLS----VGSMVAGYDKKGPQIFKVDSEG 189
>U55855-2|AAA98018.1| 204|Caenorhabditis elegans Proteasome beta
subunit protein 3 protein.
Length = 204
Score = 32.7 bits (71), Expect = 0.11
Identities = 21/88 (23%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = +2
Query: 11 TAIGISTSEGVVLAVEKRITSPLMEPTTIEKIV-EVDRHIACAVSGLMADSRTLVERARV 187
T + ++ E V +A + RI + T +K V +V + ++G +D+RT++E+
Sbjct: 10 TVVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDARTVLEKIMF 69
Query: 188 ECQNHWFVYNERMSVESCAQAVSNLAIQ 271
+ N + + ++ +SNLA Q
Sbjct: 70 RKNLYELRENRNIKPQVLSEMISNLAYQ 97
>L14745-10|AAK71356.1| 258|Caenorhabditis elegans Proteasome beta
subunit protein 6 protein.
Length = 258
Score = 31.5 bits (68), Expect = 0.25
Identities = 35/126 (27%), Positives = 53/126 (42%), Gaps = 4/126 (3%)
Frame = +2
Query: 23 ISTSEGVVLAVEKRITSPLMEPTT--IEKIVEVDRHIACAVSGLMADSRTLVERARVECQ 196
IS ++A + R+T + T EKI ++ +I SG D L + +
Sbjct: 57 ISGENFAIVASDTRMTQNDINILTRDAEKIQILNDNIILTTSGFYGDVLQLKKVLQSRLH 116
Query: 197 NHWFVYNERMSVESCAQAVS-NLAIQFGDSDDDSGTAMSRPFGVAVMFAGIDEKGP-QLF 370
+ F Y MSV+ CA+ +S NL + P+ + AGIDE G +F
Sbjct: 117 KYRFDYRSDMSVDLCAELLSRNLYYR-----------RFFPYYTGAILAGIDEHGKGAVF 165
Query: 371 HMDPSG 388
DP G
Sbjct: 166 SYDPIG 171
>AF303265-1|AAG50223.1| 258|Caenorhabditis elegans proteasome
component C5 protein.
Length = 258
Score = 31.5 bits (68), Expect = 0.25
Identities = 35/126 (27%), Positives = 53/126 (42%), Gaps = 4/126 (3%)
Frame = +2
Query: 23 ISTSEGVVLAVEKRITSPLMEPTT--IEKIVEVDRHIACAVSGLMADSRTLVERARVECQ 196
IS ++A + R+T + T EKI ++ +I SG D L + +
Sbjct: 57 ISGENFAIVASDTRMTQNDINILTRDAEKIQILNDNIILTTSGFYGDVLQLKKVLQSRLH 116
Query: 197 NHWFVYNERMSVESCAQAVS-NLAIQFGDSDDDSGTAMSRPFGVAVMFAGIDEKGP-QLF 370
+ F Y MSV+ CA+ +S NL + P+ + AGIDE G +F
Sbjct: 117 KYRFDYRSDMSVDLCAELLSRNLYYR-----------RFFPYYTGAILAGIDEHGKGAVF 165
Query: 371 HMDPSG 388
DP G
Sbjct: 166 SYDPIG 171
>Z92825-3|CAB07311.1| 531|Caenorhabditis elegans Hypothetical
protein C13C4.5 protein.
Length = 531
Score = 27.5 bits (58), Expect = 4.0
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = -2
Query: 165 VLESAIR--PDTAQAMCRSTSTIFSIVVGSIRGDVILFSTANTT 40
++ AIR DTAQA +S T F + VG++ VILF + T
Sbjct: 444 LISDAIRGNEDTAQAHYKSLVTSFWLCVGTLVLSVILFGISAIT 487
>Z49968-7|CAE17874.1| 91|Caenorhabditis elegans Hypothetical
protein M110.8 protein.
Length = 91
Score = 26.6 bits (56), Expect = 7.0
Identities = 14/57 (24%), Positives = 23/57 (40%), Gaps = 4/57 (7%)
Frame = -1
Query: 202 VILAFHTSTLN*CPGISH----KTRHSTSDVSVHFYDFFNSSRFHQRRCNPLLHRQY 44
V++ FH + + H +TRHS + + F + C LHRQ+
Sbjct: 27 VVIVFHCCKVESLHNLPHAVLERTRHSVNWARHSVFSHSQCDDFDEEMCGDTLHRQF 83
>AF039037-1|AAO21431.1| 312|Caenorhabditis elegans Hypothetical
protein R02C2.1 protein.
Length = 312
Score = 26.6 bits (56), Expect = 7.0
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 251 VSNLAIQFGDSDDDSGTAMSRPFGVAVMF 337
+ NL + + +S+DD GT FG+A +
Sbjct: 147 LENLLLVYSESEDDPGTLKITDFGLATKY 175
>AC006675-11|AAK84552.1| 326|Caenorhabditis elegans Serpentine
receptor, class t protein31 protein.
Length = 326
Score = 26.6 bits (56), Expect = 7.0
Identities = 13/56 (23%), Positives = 26/56 (46%)
Frame = -1
Query: 397 HKSATRIHVEKLGTLFINTSKHNCYTKRS*HSSPTIIITVTKLNSEIGHGLRTRLY 230
+K + +I ++ + N + Y + +P I+ V +N E+GHG +Y
Sbjct: 237 YKRSKQIFIQSVLICGFNLTASLLYVYMNFFEAPYSIVVVAHINWELGHGAPAFIY 292
>Z47070-3|CAA87341.1| 528|Caenorhabditis elegans Hypothetical
protein T09B9.4 protein.
Length = 528
Score = 26.2 bits (55), Expect = 9.2
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +2
Query: 56 EKRITSPLMEPTTIEKIVEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERM 226
E+ +T LM + KI +V A A LMAD + +ER R C Y E +
Sbjct: 217 EESLTKSLM--ANVAKIPDVHGDEAAAEK-LMADKQAEIERLRTYCSRAEKSYQEEL 270
>U80453-12|AAN63454.1| 419|Caenorhabditis elegans Hypothetical
protein C23H3.9c protein.
Length = 419
Score = 26.2 bits (55), Expect = 9.2
Identities = 7/19 (36%), Positives = 14/19 (73%)
Frame = +3
Query: 111 KWTDTSLVLCLVLWLIPGH 167
K + +L++C+ W++PGH
Sbjct: 371 KRQNANLIVCMADWIVPGH 389
>U80453-11|AAN63452.2| 503|Caenorhabditis elegans Hypothetical
protein C23H3.9a protein.
Length = 503
Score = 26.2 bits (55), Expect = 9.2
Identities = 7/19 (36%), Positives = 14/19 (73%)
Frame = +3
Query: 111 KWTDTSLVLCLVLWLIPGH 167
K + +L++C+ W++PGH
Sbjct: 455 KRQNANLIVCMADWIVPGH 473
>U80453-10|AAN63453.1| 489|Caenorhabditis elegans Hypothetical
protein C23H3.9b protein.
Length = 489
Score = 26.2 bits (55), Expect = 9.2
Identities = 7/19 (36%), Positives = 14/19 (73%)
Frame = +3
Query: 111 KWTDTSLVLCLVLWLIPGH 167
K + +L++C+ W++PGH
Sbjct: 441 KRQNANLIVCMADWIVPGH 459
>U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical
protein C23H3.9d protein.
Length = 432
Score = 26.2 bits (55), Expect = 9.2
Identities = 7/19 (36%), Positives = 14/19 (73%)
Frame = +3
Query: 111 KWTDTSLVLCLVLWLIPGH 167
K + +L++C+ W++PGH
Sbjct: 384 KRQNANLIVCMADWIVPGH 402
>U64605-4|AAF98600.1| 249|Caenorhabditis elegans Hypothetical
protein C05D9.7 protein.
Length = 249
Score = 26.2 bits (55), Expect = 9.2
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 120 DTSLVLCLVLWLIPGH*LSVLVWNARITGLCTM 218
D + LC+V W + LSV V+ R+ CTM
Sbjct: 187 DATFQLCIVGWCLSLTFLSVSVYVCRVAFHCTM 219
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,485,044
Number of Sequences: 27780
Number of extensions: 224089
Number of successful extensions: 692
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 684
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 662437636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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