Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_K21
(562 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX537543-1|CAD97778.1| 161|Homo sapiens hypothetical protein pr... 37 0.042
BC101969-1|AAI01970.1| 161|Homo sapiens LPS-induced TNF-alpha f... 37 0.042
BC101402-1|AAI01403.1| 161|Homo sapiens lipopolysaccharide-indu... 37 0.042
BC101401-1|AAI01402.1| 161|Homo sapiens LPS-induced TNF-alpha f... 37 0.042
BC096066-1|AAH96066.1| 161|Homo sapiens lipopolysaccharide-indu... 37 0.042
BC096065-1|AAH96065.1| 161|Homo sapiens lipopolysaccharide-indu... 37 0.042
BC096063-1|AAH96063.1| 161|Homo sapiens lipopolysaccharide-indu... 37 0.042
BC046154-1|AAH46154.1| 161|Homo sapiens lipopolysaccharide-indu... 37 0.042
BC039840-1|AAH39840.1| 161|Homo sapiens lipopolysaccharide-indu... 37 0.042
BC016491-1|AAH16491.1| 161|Homo sapiens lipopolysaccharide-indu... 37 0.042
BC008309-1|AAH08309.1| 161|Homo sapiens lipopolysaccharide-indu... 37 0.042
BC000053-1|AAH00053.1| 161|Homo sapiens LITAF protein protein. 37 0.042
AB034747-1|BAB32547.1| 161|Homo sapiens small integral membrane... 37 0.042
AK075278-1|BAC11515.1| 429|Homo sapiens protein ( Homo sapiens ... 29 8.5
AK001208-1|BAA91554.1| 263|Homo sapiens protein ( Homo sapiens ... 29 8.5
AC098818-1|AAY40926.1| 662|Homo sapiens unknown protein. 29 8.5
>BX537543-1|CAD97778.1| 161|Homo sapiens hypothetical protein
protein.
Length = 161
Score = 37.1 bits (82), Expect = 0.042
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +2
Query: 425 CQTCNKTVVTRVDYVPNNRTHIISAALCVISSCCCGCLF-PYCM 553
C +CNK +V+++ Y T + +LC++ C GC F P+C+
Sbjct: 96 CPSCNKMIVSQLSYNAGALTWLSCGSLCLL-GCIAGCCFIPFCV 138
>BC101969-1|AAI01970.1| 161|Homo sapiens LPS-induced TNF-alpha
factor protein.
Length = 161
Score = 37.1 bits (82), Expect = 0.042
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +2
Query: 425 CQTCNKTVVTRVDYVPNNRTHIISAALCVISSCCCGCLF-PYCM 553
C +CNK +V+++ Y T + +LC++ C GC F P+C+
Sbjct: 96 CPSCNKMIVSQLSYNAGALTWLSCGSLCLL-GCIAGCCFIPFCV 138
>BC101402-1|AAI01403.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 37.1 bits (82), Expect = 0.042
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +2
Query: 425 CQTCNKTVVTRVDYVPNNRTHIISAALCVISSCCCGCLF-PYCM 553
C +CNK +V+++ Y T + +LC++ C GC F P+C+
Sbjct: 96 CPSCNKMIVSQLSYNAGALTWLSCGSLCLL-GCIAGCCFIPFCV 138
>BC101401-1|AAI01402.1| 161|Homo sapiens LPS-induced TNF-alpha
factor protein.
Length = 161
Score = 37.1 bits (82), Expect = 0.042
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +2
Query: 425 CQTCNKTVVTRVDYVPNNRTHIISAALCVISSCCCGCLF-PYCM 553
C +CNK +V+++ Y T + +LC++ C GC F P+C+
Sbjct: 96 CPSCNKMIVSQLSYNAGALTWLSCGSLCLL-GCIAGCCFIPFCV 138
>BC096066-1|AAH96066.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 37.1 bits (82), Expect = 0.042
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +2
Query: 425 CQTCNKTVVTRVDYVPNNRTHIISAALCVISSCCCGCLF-PYCM 553
C +CNK +V+++ Y T + +LC++ C GC F P+C+
Sbjct: 96 CPSCNKMIVSQLSYNAGALTWLSCGSLCLL-GCIAGCCFIPFCV 138
>BC096065-1|AAH96065.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 37.1 bits (82), Expect = 0.042
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +2
Query: 425 CQTCNKTVVTRVDYVPNNRTHIISAALCVISSCCCGCLF-PYCM 553
C +CNK +V+++ Y T + +LC++ C GC F P+C+
Sbjct: 96 CPSCNKMIVSQLSYNAGALTWLSCGSLCLL-GCIAGCCFIPFCV 138
>BC096063-1|AAH96063.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 37.1 bits (82), Expect = 0.042
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +2
Query: 425 CQTCNKTVVTRVDYVPNNRTHIISAALCVISSCCCGCLF-PYCM 553
C +CNK +V+++ Y T + +LC++ C GC F P+C+
Sbjct: 96 CPSCNKMIVSQLSYNAGALTWLSCGSLCLL-GCIAGCCFIPFCV 138
>BC046154-1|AAH46154.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 37.1 bits (82), Expect = 0.042
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +2
Query: 425 CQTCNKTVVTRVDYVPNNRTHIISAALCVISSCCCGCLF-PYCM 553
C +CNK +V+++ Y T + +LC++ C GC F P+C+
Sbjct: 96 CPSCNKMIVSQLSYNAGALTWLSCGSLCLL-GCIAGCCFIPFCV 138
>BC039840-1|AAH39840.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 37.1 bits (82), Expect = 0.042
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +2
Query: 425 CQTCNKTVVTRVDYVPNNRTHIISAALCVISSCCCGCLF-PYCM 553
C +CNK +V+++ Y T + +LC++ C GC F P+C+
Sbjct: 96 CPSCNKMIVSQLSYNAGALTWLSCGSLCLL-GCIAGCCFIPFCV 138
>BC016491-1|AAH16491.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 37.1 bits (82), Expect = 0.042
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +2
Query: 425 CQTCNKTVVTRVDYVPNNRTHIISAALCVISSCCCGCLF-PYCM 553
C +CNK +V+++ Y T + +LC++ C GC F P+C+
Sbjct: 96 CPSCNKMIVSQLSYNAGALTWLSCGSLCLL-GCIAGCCFIPFCV 138
>BC008309-1|AAH08309.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 37.1 bits (82), Expect = 0.042
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +2
Query: 425 CQTCNKTVVTRVDYVPNNRTHIISAALCVISSCCCGCLF-PYCM 553
C +CNK +V+++ Y T + +LC++ C GC F P+C+
Sbjct: 96 CPSCNKMIVSQLSYNAGALTWLSCGSLCLL-GCIAGCCFIPFCV 138
>BC000053-1|AAH00053.1| 161|Homo sapiens LITAF protein protein.
Length = 161
Score = 37.1 bits (82), Expect = 0.042
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +2
Query: 425 CQTCNKTVVTRVDYVPNNRTHIISAALCVISSCCCGCLF-PYCM 553
C +CNK +V+++ Y T + +LC++ C GC F P+C+
Sbjct: 96 CPSCNKMIVSQLSYNAGALTWLSCGSLCLL-GCIAGCCFIPFCV 138
>AB034747-1|BAB32547.1| 161|Homo sapiens small integral membrane
protein of lysosome/late endosome protein.
Length = 161
Score = 37.1 bits (82), Expect = 0.042
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +2
Query: 425 CQTCNKTVVTRVDYVPNNRTHIISAALCVISSCCCGCLF-PYCM 553
C +CNK +V+++ Y T + +LC++ C GC F P+C+
Sbjct: 96 CPSCNKMIVSQLSYNAGALTWLSCGSLCLL-GCIAGCCFIPFCV 138
>AK075278-1|BAC11515.1| 429|Homo sapiens protein ( Homo sapiens
cDNA FLJ90797 fis, clone THYRO1001770, weakly similar to
PROBABLE SERINE/THREONINE-PROTEIN KINASE YNL020C (EC
2.7.1.-). ).
Length = 429
Score = 29.5 bits (63), Expect = 8.5
Identities = 18/82 (21%), Positives = 35/82 (42%)
Frame = +3
Query: 255 KQCQIQHRHRHTSVIIHHRRPVW*SLQTLHRERQSSHPEQQHPGHRES*VPDRRALRVKH 434
+Q +QHRH H ++ Q +++Q +Q H H + D + +H
Sbjct: 216 QQLHLQHRHPHQQQQQQQQQQQ--QQQQQQQQQQQQQQQQHHHHHHHHLLQDAYMQQYQH 273
Query: 435 ATKLLSPEWITYRTIEHTSYPP 500
AT+ + + + + H+ Y P
Sbjct: 274 ATQ--QQQMLQQQFLMHSVYQP 293
>AK001208-1|BAA91554.1| 263|Homo sapiens protein ( Homo sapiens
cDNA FLJ10346 fis, clone NT2RM2001004. ).
Length = 263
Score = 29.5 bits (63), Expect = 8.5
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +3
Query: 315 PVW*SLQTLHRERQSSHPEQQHPGHRES*VPDRRALRVKHATKLLSPEWITYR 473
PVW L + R+ S P+Q HP H + P LR + KL + YR
Sbjct: 76 PVWLCLSPVPRQLGGSIPKQMHPAHDGT--PGTPILRTLQSFKLELAGFCLYR 126
>AC098818-1|AAY40926.1| 662|Homo sapiens unknown protein.
Length = 662
Score = 29.5 bits (63), Expect = 8.5
Identities = 18/82 (21%), Positives = 35/82 (42%)
Frame = +3
Query: 255 KQCQIQHRHRHTSVIIHHRRPVW*SLQTLHRERQSSHPEQQHPGHRES*VPDRRALRVKH 434
+Q +QHRH H ++ Q +++Q +Q H H + D + +H
Sbjct: 449 QQLHLQHRHPHQQQQQQQQQQQ--QQQQQQQQQQQQQQQQHHHHHHHHLLQDAYMQQYQH 506
Query: 435 ATKLLSPEWITYRTIEHTSYPP 500
AT+ + + + + H+ Y P
Sbjct: 507 ATQ--QQQMLQQQFLMHSVYQP 526
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,155,827
Number of Sequences: 237096
Number of extensions: 1387885
Number of successful extensions: 3344
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3332
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5646880600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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