Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_K15
(570 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79754-10|CAB02099.1| 181|Caenorhabditis elegans Hypothetical p... 92 2e-19
U23179-7|AAC46721.1| 782|Caenorhabditis elegans Hypothetical pr... 31 0.77
Z70038-6|CAA93882.3| 1323|Caenorhabditis elegans Hypothetical pr... 29 2.4
X57767-1|CAA40919.1| 1323|Caenorhabditis elegans tyrosine kinase... 29 2.4
D63426-1|BAA09729.1| 1374|Caenorhabditis elegans receptor tyrosi... 29 2.4
Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical p... 29 3.1
Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical pr... 29 3.1
AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein. 29 3.1
Z48544-2|CAA88437.1| 766|Caenorhabditis elegans Hypothetical pr... 28 5.4
U29535-9|AAK31453.2| 2148|Caenorhabditis elegans Hypothetical pr... 27 9.5
>Z79754-10|CAB02099.1| 181|Caenorhabditis elegans Hypothetical
protein F25H2.11 protein.
Length = 181
Score = 92.3 bits (219), Expect = 2e-19
Identities = 57/176 (32%), Positives = 94/176 (53%), Gaps = 10/176 (5%)
Frame = +3
Query: 72 MIIYKDVITGDEMFSDTYKVKLIDEVIYEVPA-DVIRTQDDIHIDGLTXXXXXXXXXXXX 248
M+IYKD+ T DE+ SD++ +KL+D+++YE V+R + +I + G
Sbjct: 1 MLIYKDIFTDDELSSDSFPMKLVDDLVYEFKGKHVVRKEGEIVLAGSNPSAEEGAEDDGS 60
Query: 249 XXXWCR--HSPESHVLVETYAFGDKKSYTLYLKDYMKKLVAKLEEKAPDQ--VDIFKTNM 416
R +H LVE + D + Y+K +MK ++ +E+ D+ VD FK +
Sbjct: 61 DEHVERGIDIVLNHKLVEMNCYEDASMFKAYIKKFMKNVIDHMEKNNRDKADVDAFKKKI 120
Query: 417 NKVMKDILA--RFKDLQFFTGESM---DCDGMVAMMEYRNINGTDVPFMMFFKHGL 569
+ +LA RFK+L FF GE +G VA++EYR+++GT+VP +M K +
Sbjct: 121 QGWVVSLLAKDRFKNLAFFIGERAAEGAENGQVAIIEYRDVDGTEVPTLMLVKEAI 176
>U23179-7|AAC46721.1| 782|Caenorhabditis elegans Hypothetical
protein C27D6.1 protein.
Length = 782
Score = 30.7 bits (66), Expect = 0.77
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = +3
Query: 351 KKLVAKLEEKAPDQVDIFKTNMNKVMKDILARFKDLQFFTGESMDCDGMVAMMEYRNING 530
K L+A + + DI KTN+ K M + AR + L+ E ++A E RNI
Sbjct: 692 KDLLATMTIETLKAADIEKTNLKKRMNEQDARIRQLEREKKEGERIRSIIAKWEKRNIPK 751
Query: 531 TD 536
T+
Sbjct: 752 TE 753
>Z70038-6|CAA93882.3| 1323|Caenorhabditis elegans Hypothetical
protein ZK1067.1 protein.
Length = 1323
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2
Query: 497 HAITVHGFTCEELKILKPSEYVLHYFVHVRLEYINL 390
H I H FT E+LK+L+ + V Y V+ + +L
Sbjct: 391 HLIIEHAFTYEQLKVLETVKIVSEYITIVQQNFYDL 426
>X57767-1|CAA40919.1| 1323|Caenorhabditis elegans tyrosine kinase
protein.
Length = 1323
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2
Query: 497 HAITVHGFTCEELKILKPSEYVLHYFVHVRLEYINL 390
H I H FT E+LK+L+ + V Y V+ + +L
Sbjct: 391 HLIIEHAFTYEQLKVLETVKIVSEYITIVQQNFYDL 426
>D63426-1|BAA09729.1| 1374|Caenorhabditis elegans receptor tyrosine
kinase protein.
Length = 1374
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2
Query: 497 HAITVHGFTCEELKILKPSEYVLHYFVHVRLEYINL 390
H I H FT E+LK+L+ + V Y V+ + +L
Sbjct: 442 HLIIEHAFTYEQLKVLETVKIVSEYITIVQQNFYDL 477
>Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical
protein C02F4.1 protein.
Length = 1781
Score = 28.7 bits (61), Expect = 3.1
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +3
Query: 315 KKSYTLYLKDYMKKLVAKLEEK 380
+K+Y YL+++MK LVA + EK
Sbjct: 754 EKTYKQYLREFMKSLVALMSEK 775
>Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical
protein C02F4.1 protein.
Length = 1781
Score = 28.7 bits (61), Expect = 3.1
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +3
Query: 315 KKSYTLYLKDYMKKLVAKLEEK 380
+K+Y YL+++MK LVA + EK
Sbjct: 754 EKTYKQYLREFMKSLVALMSEK 775
>AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein.
Length = 1781
Score = 28.7 bits (61), Expect = 3.1
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +3
Query: 315 KKSYTLYLKDYMKKLVAKLEEK 380
+K+Y YL+++MK LVA + EK
Sbjct: 754 EKTYKQYLREFMKSLVALMSEK 775
>Z48544-2|CAA88437.1| 766|Caenorhabditis elegans Hypothetical
protein ZK945.3 protein.
Length = 766
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +3
Query: 312 DKKSYTLYLKDYMKKLVAKLEEKAPDQVDIFKTNMNKVMKDILARFK 452
+KK+ L L +K + K+EEKA K+ ++K +KD L R K
Sbjct: 22 EKKAKGLKLNKVDRKRIVKIEEKA-----ALKSKVDKAVKDELERLK 63
>U29535-9|AAK31453.2| 2148|Caenorhabditis elegans Hypothetical protein
C25H3.8 protein.
Length = 2148
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/53 (24%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -2
Query: 542 WYIGTIDISVLHHGDHAITV-HGFTCEELKILKPSEYVLHYFVHVRLEYINLV 387
WY GT+D+ + H G +TV +L++LK ++ Y ++ + ++++
Sbjct: 1794 WYFGTLDLEMGHVGLSVVTVSKSGLPRDLRLLK-QQFNKFYLAELQKQTLSII 1845
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,293,174
Number of Sequences: 27780
Number of extensions: 270777
Number of successful extensions: 800
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 797
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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