Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_K15
         (570 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   3.7  
DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    22   4.9  
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    22   4.9  
DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    21   8.6  
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    21   8.6  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   8.6  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +3

Query: 504 MMEYRNINGTDVPFMMFFKHGL 569
           M+E R++  +  PF +  KHGL
Sbjct: 94  MLELRDLPISGKPFQIRMKHGL 115


>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 6/24 (25%), Positives = 17/24 (70%)
 Frame = -2

Query: 206 SINVDIVLCSDHVCRDFINNFVDQ 135
           ++++D+VL ++ +   ++N  +DQ
Sbjct: 30  NVDIDVVLNTERLLNAYVNCLLDQ 53


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 6/24 (25%), Positives = 17/24 (70%)
 Frame = -2

Query: 206 SINVDIVLCSDHVCRDFINNFVDQ 135
           ++++D+VL ++ +   ++N  +DQ
Sbjct: 30  NVDIDVVLNTERLLNAYVNCLLDQ 53


>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
           protein.
          Length = 116

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 6/22 (27%), Positives = 14/22 (63%)
 Frame = -2

Query: 203 INVDIVLCSDHVCRDFINNFVD 138
           +N+D +L +D +   + + F+D
Sbjct: 30  VNIDEILANDRLRNQYYDCFID 51


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
           protein.
          Length = 116

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 6/22 (27%), Positives = 14/22 (63%)
 Frame = -2

Query: 203 INVDIVLCSDHVCRDFINNFVD 138
           +N+D +L +D +   + + F+D
Sbjct: 30  VNIDEILANDRLRNQYYDCFID 51


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = +2

Query: 284  CASRNVCIWR*EILYIIPQRLHEKISSKIGRKST*PG*YIQD 409
            C  RN+ ++R E   ++   + +KI   + R+S     Y+QD
Sbjct: 1008 CRQRNLDLYRQEKEEMVELGVLDKIFLALSRESGFKKTYVQD 1049


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,646
Number of Sequences: 438
Number of extensions: 3291
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16381902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)