Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_K14
(364 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF326939-1|AAG49389.1| 109|Caenorhabditis elegans mitochondrial... 54 2e-08
AF038604-5|AAB92010.1| 109|Caenorhabditis elegans Hypothetical ... 54 2e-08
U49941-7|AAB53875.1| 88|Caenorhabditis elegans Mitochondrial a... 44 3e-05
L12348-1|AAA28107.1| 88|Caenorhabditis elegans ATPase inhibito... 44 3e-05
AL117202-22|CAB57900.1| 691|Caenorhabditis elegans Hypothetical... 31 0.19
AF067216-8|AAN84852.1| 954|Caenorhabditis elegans Hypothetical ... 31 0.19
AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical ... 31 0.19
U41528-3|AAK39170.2| 594|Caenorhabditis elegans Kinesin-like pr... 30 0.43
Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical p... 30 0.57
Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical p... 30 0.57
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 29 0.75
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 29 0.75
U29377-2|AAA68713.4| 627|Caenorhabditis elegans Hypothetical pr... 29 0.75
U29377-1|AAZ94294.1| 773|Caenorhabditis elegans Hypothetical pr... 29 0.75
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 29 0.75
Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical pr... 29 1.00
Z81098-5|CAB97235.1| 330|Caenorhabditis elegans Hypothetical pr... 29 1.00
Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical pr... 29 1.00
AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain sp... 29 1.00
Z81571-5|CAB04615.1| 419|Caenorhabditis elegans Hypothetical pr... 28 1.7
AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical ... 28 1.7
AF022982-4|AAB69938.1| 296|Caenorhabditis elegans Dnaj domain (... 28 2.3
Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical pr... 27 4.0
X70833-1|CAA50181.1| 575|Caenorhabditis elegans Cytoplasmic int... 27 4.0
U29379-3|AAF99979.3| 558|Caenorhabditis elegans Intermediate fi... 27 4.0
AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical ... 27 4.0
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 27 5.3
U28412-6|AAC46596.2| 489|Caenorhabditis elegans Hypothetical pr... 27 5.3
Z82284-5|CAB05291.1| 418|Caenorhabditis elegans Hypothetical pr... 26 7.0
Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical p... 26 7.0
Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical pr... 26 7.0
Z81016-6|CAB02667.1| 1573|Caenorhabditis elegans Hypothetical pr... 26 7.0
Z48621-13|CAA88549.1| 1573|Caenorhabditis elegans Hypothetical p... 26 7.0
X70830-1|CAA50178.1| 534|Caenorhabditis elegans Cytoplasmic int... 26 9.3
U49831-7|AAA93408.1| 558|Caenorhabditis elegans Intermediate fi... 26 9.3
U49831-6|AAA93407.1| 589|Caenorhabditis elegans Intermediate fi... 26 9.3
AL023811-1|CAA19422.2| 947|Caenorhabditis elegans Hypothetical ... 26 9.3
>AF326939-1|AAG49389.1| 109|Caenorhabditis elegans mitochondrial
ATPase inhibitor protein.
Length = 109
Score = 54.4 bits (125), Expect = 2e-08
Identities = 20/45 (44%), Positives = 32/45 (71%)
Frame = -2
Query: 315 FYKKQKEQLHELKTHLDKEINFHSEQIKRHEDAINRHKTKLAEIE 181
FYKKQK QL EL+ H+ +E+ H Q++ H+ + RH+ +++EIE
Sbjct: 56 FYKKQKAQLQELREHIQEEVKHHEGQLENHKKVLERHQQRISEIE 100
>AF038604-5|AAB92010.1| 109|Caenorhabditis elegans Hypothetical
protein B0546.1 protein.
Length = 109
Score = 54.4 bits (125), Expect = 2e-08
Identities = 20/45 (44%), Positives = 32/45 (71%)
Frame = -2
Query: 315 FYKKQKEQLHELKTHLDKEINFHSEQIKRHEDAINRHKTKLAEIE 181
FYKKQK QL EL+ H+ +E+ H Q++ H+ + RH+ +++EIE
Sbjct: 56 FYKKQKAQLQELREHIQEEVKHHEGQLENHKKVLERHQQRISEIE 100
>U49941-7|AAB53875.1| 88|Caenorhabditis elegans Mitochondrial
atpase inhibitorfamily protein 1 protein.
Length = 88
Score = 44.0 bits (99), Expect = 3e-05
Identities = 20/56 (35%), Positives = 36/56 (64%)
Frame = -2
Query: 345 LGACTEKKNTFYKKQKEQLHELKTHLDKEINFHSEQIKRHEDAINRHKTKLAEIEK 178
+GA T ++ F ++QK+QL LK L+ ++ ++I+ HE + +H+ +L EIEK
Sbjct: 30 MGA-TREEEYFRRQQKDQLDNLKKKLEADMTQSQQEIRDHEKVLEQHQQRLKEIEK 84
>L12348-1|AAA28107.1| 88|Caenorhabditis elegans ATPase inhibitor
protein.
Length = 88
Score = 44.0 bits (99), Expect = 3e-05
Identities = 20/56 (35%), Positives = 36/56 (64%)
Frame = -2
Query: 345 LGACTEKKNTFYKKQKEQLHELKTHLDKEINFHSEQIKRHEDAINRHKTKLAEIEK 178
+GA T ++ F ++QK+QL LK L+ ++ ++I+ HE + +H+ +L EIEK
Sbjct: 30 MGA-TREEEYFRRQQKDQLDNLKKKLEADMTQSQQEIRDHEKVLEQHQQRLKEIEK 84
>AL117202-22|CAB57900.1| 691|Caenorhabditis elegans Hypothetical
protein Y47D3A.28 protein.
Length = 691
Score = 31.5 bits (68), Expect = 0.19
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = -2
Query: 354 RRNLGACTEKKNTFYKKQKEQLHELKTHLDKEINFHSEQIKRHEDAINRHKTKLAEIEK 178
R+ G T + K + +++ E++ L ++ H E K D + RH T + E EK
Sbjct: 525 RKASGTPTAPEPEAKKPRSQKMDEIRAMLARKSTHHKEAEKAEHDMLQRHLTGMEEREK 583
>AF067216-8|AAN84852.1| 954|Caenorhabditis elegans Hypothetical
protein C35E7.5b protein.
Length = 954
Score = 31.5 bits (68), Expect = 0.19
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = -2
Query: 297 EQLHELKTHLDKEINFHSEQIKRHEDAINRHKTKLAEIEKK 175
E+ E + L+KE N H E +K+ D+ + AE+EKK
Sbjct: 513 EKHREAISSLEKECNMHLESLKKMNDSRKEFEVLNAELEKK 553
>AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical
protein C35E7.5a protein.
Length = 1262
Score = 31.5 bits (68), Expect = 0.19
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = -2
Query: 297 EQLHELKTHLDKEINFHSEQIKRHEDAINRHKTKLAEIEKK 175
E+ E + L+KE N H E +K+ D+ + AE+EKK
Sbjct: 513 EKHREAISSLEKECNMHLESLKKMNDSRKEFEVLNAELEKK 553
>U41528-3|AAK39170.2| 594|Caenorhabditis elegans Kinesin-like
protein protein 8 protein.
Length = 594
Score = 30.3 bits (65), Expect = 0.43
Identities = 15/52 (28%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Frame = -2
Query: 321 NTFYKKQKEQLHELKTHL---DKEINFHSEQIKRHEDAINRHKTKLAEIEKK 175
+ F +E+L +LK + ++EIN E++ R +D++ K+K E+E++
Sbjct: 350 DVFRSDVEEKLDKLKDDISSREREINAQKEEVNRIKDSLRLEKSKRNELEEE 401
>Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 29.9 bits (64), Expect = 0.57
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -2
Query: 300 KEQLHELKTHLDKEINFHSEQIKRHEDAINRHKTKLAEIEKK 175
+E L EL+ LD++ + K ED H+ ++AE+EK+
Sbjct: 355 QEMLGELEAELDRQKELKLQLEKDMEDLRKEHEGQMAELEKR 396
>Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 29.9 bits (64), Expect = 0.57
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -2
Query: 300 KEQLHELKTHLDKEINFHSEQIKRHEDAINRHKTKLAEIEKK 175
+E L EL+ LD++ + K ED H+ ++AE+EK+
Sbjct: 355 QEMLGELEAELDRQKELKLQLEKDMEDLRKEHEGQMAELEKR 396
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical
protein T10G3.5b protein.
Length = 1203
Score = 29.5 bits (63), Expect = 0.75
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = -2
Query: 294 QLHELKTHLDKEINFHSE---QIKRHEDAINRHKTKLAEIEKK*T*HIHSSPSNYKVSVN 124
+L + + LDKE + E +I + +IN K KLAE EKK T + + + + N
Sbjct: 421 ELASMGSLLDKERSLLEEKNKEISERDSSINDLKEKLAESEKKATKYKNELKEHADLVEN 480
Query: 123 LVIN-NKLND 97
L + NKL +
Sbjct: 481 LTLQLNKLQE 490
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical
protein T10G3.5a protein.
Length = 1205
Score = 29.5 bits (63), Expect = 0.75
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = -2
Query: 294 QLHELKTHLDKEINFHSE---QIKRHEDAINRHKTKLAEIEKK*T*HIHSSPSNYKVSVN 124
+L + + LDKE + E +I + +IN K KLAE EKK T + + + + N
Sbjct: 423 ELASMGSLLDKERSLLEEKNKEISERDSSINDLKEKLAESEKKATKYKNELKEHADLVEN 482
Query: 123 LVIN-NKLND 97
L + NKL +
Sbjct: 483 LTLQLNKLQE 492
>U29377-2|AAA68713.4| 627|Caenorhabditis elegans Hypothetical
protein K05F1.6b protein.
Length = 627
Score = 29.5 bits (63), Expect = 0.75
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +1
Query: 175 LLLNFSQFGLVAVDGVFVTLDLFTVEVY 258
L L F FG +AV G F L +FT E+Y
Sbjct: 431 LALAFMYFGKIAVQGAFNILYIFTSELY 458
>U29377-1|AAZ94294.1| 773|Caenorhabditis elegans Hypothetical
protein K05F1.6a protein.
Length = 773
Score = 29.5 bits (63), Expect = 0.75
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +1
Query: 175 LLLNFSQFGLVAVDGVFVTLDLFTVEVY 258
L L F FG +AV G F L +FT E+Y
Sbjct: 577 LALAFMYFGKIAVQGAFNILYIFTSELY 604
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 29.5 bits (63), Expect = 0.75
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = -2
Query: 294 QLHELKTHLDKEINFHSE---QIKRHEDAINRHKTKLAEIEKK*T*HIHSSPSNYKVSVN 124
+L + + LDKE + E +I + +IN K KLAE EKK T + + + + N
Sbjct: 423 ELASMGSLLDKERSLLEEKNKEISERDSSINDLKEKLAESEKKATKYKNELKEHADLVEN 482
Query: 123 LVIN-NKLND 97
L + NKL +
Sbjct: 483 LTLQLNKLQE 492
>Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical protein
R31.1 protein.
Length = 4063
Score = 29.1 bits (62), Expect = 1.00
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = -2
Query: 333 TEKKNTFYKKQKEQLHELKTH---LDKEINFHSEQIKRHEDAINRHKTKLAEIE 181
TE N KKQ++ E+ H +DK + E IKRH A ++ K K +E+E
Sbjct: 1593 TEALN-MVKKQEQLEAEVNQHGGQIDKVLLQAGELIKRHHSASSQIKAKSSELE 1645
>Z81098-5|CAB97235.1| 330|Caenorhabditis elegans Hypothetical
protein K07A12.7 protein.
Length = 330
Score = 29.1 bits (62), Expect = 1.00
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = -2
Query: 306 KQKEQLHELKTHLDKEINFHSEQIKRHEDAINRHKTKLAE 187
+++++L EL DKE+ H + + A+N KLA+
Sbjct: 244 EKEKRLEELHEKYDKEVEEHKRETQEKRKALNNELDKLAQ 283
>Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical protein
R31.1 protein.
Length = 4063
Score = 29.1 bits (62), Expect = 1.00
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = -2
Query: 333 TEKKNTFYKKQKEQLHELKTH---LDKEINFHSEQIKRHEDAINRHKTKLAEIE 181
TE N KKQ++ E+ H +DK + E IKRH A ++ K K +E+E
Sbjct: 1593 TEALN-MVKKQEQLEAEVNQHGGQIDKVLLQAGELIKRHHSASSQIKAKSSELE 1645
>AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain
spectrin homolog Sma1 protein.
Length = 4063
Score = 29.1 bits (62), Expect = 1.00
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = -2
Query: 333 TEKKNTFYKKQKEQLHELKTH---LDKEINFHSEQIKRHEDAINRHKTKLAEIE 181
TE N KKQ++ E+ H +DK + E IKRH A ++ K K +E+E
Sbjct: 1593 TEALN-MVKKQEQLEAEVNQHGGQIDKVLLQAGELIKRHHSASSQIKAKSSELE 1645
>Z81571-5|CAB04615.1| 419|Caenorhabditis elegans Hypothetical
protein M01G12.6 protein.
Length = 419
Score = 28.3 bits (60), Expect = 1.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 187 FSQFGLVAVDGVFVTLDLFTVEVYFF 264
F+ +V +DG FVT D V +YFF
Sbjct: 152 FTTTTVVEIDGKFVTFDFLEVFLYFF 177
>AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical
protein K09F6.9 protein.
Length = 609
Score = 28.3 bits (60), Expect = 1.7
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = -2
Query: 309 KKQKEQLHEL--KTHLDKEINFHSEQIKRHEDAINRHKTKLAEIEKK 175
+K+K +L E K +L++ E I+RH +A RH+ +L +E K
Sbjct: 367 EKEKRELEEKQKKENLERATQKEREHIERHREAQERHE-RLQALEAK 412
>AF022982-4|AAB69938.1| 296|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 22 protein.
Length = 296
Score = 27.9 bits (59), Expect = 2.3
Identities = 14/54 (25%), Positives = 30/54 (55%)
Frame = -2
Query: 330 EKKNTFYKKQKEQLHELKTHLDKEINFHSEQIKRHEDAINRHKTKLAEIEKK*T 169
+KK T + KE++ ++ L+KE+N E++K+ + + K + ++K T
Sbjct: 130 KKKKTDQRNFKEEIEAIRRQLEKEVN---EEVKQKATLMKTEREKHQKSQEKLT 180
>Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical
protein W02B8.2 protein.
Length = 1256
Score = 27.1 bits (57), Expect = 4.0
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Frame = -2
Query: 354 RRNLGACTEKKNTFYKKQKEQLHELK--THLDKEINFHSEQIK----RHEDAINRHKTKL 193
RRNL EK+ K++ E L +++ T L K + +K E+ I+ K+++
Sbjct: 343 RRNLKGFDEKREELEKQRDEALEDVRRITELKKNVEIELRSLKLLAEEREEQIDELKSRV 402
Query: 192 AEIE 181
A E
Sbjct: 403 AGYE 406
>X70833-1|CAA50181.1| 575|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 575
Score = 27.1 bits (57), Expect = 4.0
Identities = 11/46 (23%), Positives = 26/46 (56%)
Frame = -2
Query: 318 TFYKKQKEQLHELKTHLDKEINFHSEQIKRHEDAINRHKTKLAEIE 181
++YK + +++H + E N+ E++KR + + K+A++E
Sbjct: 301 SWYKLKVQEIHTQNSRNCLEQNYAREEVKRLRTTLGDMRGKMADLE 346
Score = 26.6 bits (56), Expect = 5.3
Identities = 15/60 (25%), Positives = 27/60 (45%)
Frame = -2
Query: 357 IRRNLGACTEKKNTFYKKQKEQLHELKTHLDKEINFHSEQIKRHEDAINRHKTKLAEIEK 178
+R G + Y+ + +L DKE +QIK+ + +N ++ KL E E+
Sbjct: 105 LRGKWGHDSTSVKVMYETELRSAKDLIADSDKERAQLEDQIKKLVEELNNYRNKLHEAER 164
>U29379-3|AAF99979.3| 558|Caenorhabditis elegans Intermediate
filament, a protein 4 protein.
Length = 558
Score = 27.1 bits (57), Expect = 4.0
Identities = 11/46 (23%), Positives = 26/46 (56%)
Frame = -2
Query: 318 TFYKKQKEQLHELKTHLDKEINFHSEQIKRHEDAINRHKTKLAEIE 181
++YK + +++H + E N+ E++KR + + K+A++E
Sbjct: 284 SWYKLKVQEIHTQNSRNCLEQNYAREEVKRLRTTLGDMRGKMADLE 329
Score = 26.6 bits (56), Expect = 5.3
Identities = 15/60 (25%), Positives = 27/60 (45%)
Frame = -2
Query: 357 IRRNLGACTEKKNTFYKKQKEQLHELKTHLDKEINFHSEQIKRHEDAINRHKTKLAEIEK 178
+R G + Y+ + +L DKE +QIK+ + +N ++ KL E E+
Sbjct: 86 LRGKWGHDSTSVKVMYETELRSAKDLIADSDKERAQLEDQIKKLVEELNNYRNKLHEAER 145
>AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical
protein Y54E2A.8 protein.
Length = 485
Score = 27.1 bits (57), Expect = 4.0
Identities = 13/51 (25%), Positives = 27/51 (52%)
Frame = -2
Query: 327 KKNTFYKKQKEQLHELKTHLDKEINFHSEQIKRHEDAINRHKTKLAEIEKK 175
KK Y+++K++ +LK LD+ N Q++ + + + E+EK+
Sbjct: 271 KKEQIYERKKQRKEKLKKELDRRPNDGVLQLETEDFDWKPRRKRRKELEKE 321
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 26.6 bits (56), Expect = 5.3
Identities = 12/46 (26%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = -2
Query: 309 KKQKEQL-HELKTHLDKEINFHSEQIKRHEDAINRHKTKLAEIEKK 175
K+ EQ+ H ++ ++++ S Q++ D I +HK + +++EK+
Sbjct: 1179 KRAIEQIQHTMEGKIEEQKAKFSRQVEELHDQIEQHKKQRSQLEKQ 1224
Score = 26.6 bits (56), Expect = 5.3
Identities = 17/79 (21%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Frame = -2
Query: 330 EKKNTFYKKQKEQLHELKTHLDKEINF----HSEQIKRHEDAINRHKTKLAEIEKK*T*H 163
++KN +KE+ L+ HL+KEI+ E ++ E+++N+ +L + + H
Sbjct: 1342 DEKNALLD-EKEEAEGLRAHLEKEIHAARQGAGEARRKAEESVNQQLEELRKKNLRDVEH 1400
Query: 162 IHSSPSNYKVSVNLVINNK 106
+ +V+ ++ +K
Sbjct: 1401 LQKQLEESEVAKERILQSK 1419
>U28412-6|AAC46596.2| 489|Caenorhabditis elegans Hypothetical
protein T19C3.5 protein.
Length = 489
Score = 26.6 bits (56), Expect = 5.3
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -2
Query: 348 NLGACTEKKNTFYKKQKEQLHELKTHLDKEINFH 247
N AC+ K ++ LH L +H+D NF+
Sbjct: 188 NAQACSAAKGILIEEANRFLHSLPSHVDVGANFY 221
>Z82284-5|CAB05291.1| 418|Caenorhabditis elegans Hypothetical
protein T27E7.6 protein.
Length = 418
Score = 26.2 bits (55), Expect = 7.0
Identities = 10/46 (21%), Positives = 24/46 (52%)
Frame = -2
Query: 330 EKKNTFYKKQKEQLHELKTHLDKEINFHSEQIKRHEDAINRHKTKL 193
E+K K++ ++L + +++ H E+ K+H I + K ++
Sbjct: 178 EEKQKIMKERSDELEKYTREMNEMAKNHQEERKKHNAIIGQKKMEM 223
>Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical
protein F02E9.4b protein.
Length = 1507
Score = 26.2 bits (55), Expect = 7.0
Identities = 10/38 (26%), Positives = 17/38 (44%)
Frame = -2
Query: 336 CTEKKNTFYKKQKEQLHELKTHLDKEINFHSEQIKRHE 223
CT K T K+Q+ + +K + H +K H+
Sbjct: 1450 CTGKMTTNEKEQRNSVDYMKVTTTPRLRIHKRMLKEHK 1487
>Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical protein
F02E9.4a protein.
Length = 1505
Score = 26.2 bits (55), Expect = 7.0
Identities = 10/38 (26%), Positives = 17/38 (44%)
Frame = -2
Query: 336 CTEKKNTFYKKQKEQLHELKTHLDKEINFHSEQIKRHE 223
CT K T K+Q+ + +K + H +K H+
Sbjct: 1448 CTGKMTTNEKEQRNSVDYMKVTTTPRLRIHKRMLKEHK 1485
>Z81016-6|CAB02667.1| 1573|Caenorhabditis elegans Hypothetical
protein F21G4.2 protein.
Length = 1573
Score = 26.2 bits (55), Expect = 7.0
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = +1
Query: 157 MYVLCSLLLNFSQFGLVAVDGVFVTLDLFTV 249
M VL +L+++ +G+V G+F++ +FT+
Sbjct: 122 MVVLTALIVSCRNYGIVTSGGLFISWLVFTI 152
>Z48621-13|CAA88549.1| 1573|Caenorhabditis elegans Hypothetical
protein F21G4.2 protein.
Length = 1573
Score = 26.2 bits (55), Expect = 7.0
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = +1
Query: 157 MYVLCSLLLNFSQFGLVAVDGVFVTLDLFTV 249
M VL +L+++ +G+V G+F++ +FT+
Sbjct: 122 MVVLTALIVSCRNYGIVTSGGLFISWLVFTI 152
>X70830-1|CAA50178.1| 534|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 534
Score = 25.8 bits (54), Expect = 9.3
Identities = 11/48 (22%), Positives = 24/48 (50%)
Frame = -2
Query: 318 TFYKKQKEQLHELKTHLDKEINFHSEQIKRHEDAINRHKTKLAEIEKK 175
++YK + ++ + E + +++KR D I + KL ++E K
Sbjct: 280 SWYKLKVSEVQGSANRANMESTYQRDEVKRMRDNIGDLRGKLGDLENK 327
>U49831-7|AAA93408.1| 558|Caenorhabditis elegans Intermediate
filament, b protein1, isoform a protein.
Length = 558
Score = 25.8 bits (54), Expect = 9.3
Identities = 11/48 (22%), Positives = 24/48 (50%)
Frame = -2
Query: 318 TFYKKQKEQLHELKTHLDKEINFHSEQIKRHEDAINRHKTKLAEIEKK 175
++YK + ++ + E + +++KR D I + KL ++E K
Sbjct: 280 SWYKLKVSEVQGSANRANMESTYQRDEVKRMRDNIGDLRGKLGDLENK 327
>U49831-6|AAA93407.1| 589|Caenorhabditis elegans Intermediate
filament, b protein1, isoform b protein.
Length = 589
Score = 25.8 bits (54), Expect = 9.3
Identities = 11/48 (22%), Positives = 24/48 (50%)
Frame = -2
Query: 318 TFYKKQKEQLHELKTHLDKEINFHSEQIKRHEDAINRHKTKLAEIEKK 175
++YK + ++ + E + +++KR D I + KL ++E K
Sbjct: 311 SWYKLKVSEVQGSANRANMESTYQRDEVKRMRDNIGDLRGKLGDLENK 358
>AL023811-1|CAA19422.2| 947|Caenorhabditis elegans Hypothetical
protein C51F7.1 protein.
Length = 947
Score = 25.8 bits (54), Expect = 9.3
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = -2
Query: 261 EINFHSEQIKRHEDAINRHKTKLAEIEKK*T*HIH----SSPSNYKVSVNLVINNKLNDY 94
++NF+++ +RHE + + T + K T I SS + V ++ N +ND
Sbjct: 509 DVNFNNKNRERHESSTSTSGTHVLFSSKDATPPIETAVVSSTMSMSVPLDSDTNQSINDR 568
Query: 93 YLSMLLALLICLVRNTF 43
LSM + L + ++
Sbjct: 569 LLSMSASDLRAMAERSY 585
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,801,823
Number of Sequences: 27780
Number of extensions: 138196
Number of successful extensions: 607
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 607
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 503476126
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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