Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_K14
         (364 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    21   3.4  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    21   3.4  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   4.5  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   5.9  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   5.9  
AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    21   5.9  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    20   7.8  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    20   7.8  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    20   7.8  

>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = +2

Query: 8   FFLDKPSIYLLQNVFLTKHIKSASNILK**SFNLLFITRLTDTL 139
           F  +K S   +    L  H+KS SN+ +    N  + T+   +L
Sbjct: 17  FKCEKCSYSCVNKSMLNSHLKSHSNVYQYRCANCTYATKYCHSL 60


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
 Frame = -2

Query: 312 YKKQKEQLHELKTHL-DKEINFHSEQIK-RHEDAINRHKTKLAEIEKK*T*HIHSSPSNY 139
           Y + +E+  E K++  ++E   + E  K R  D   R ++K  +I       I S  +NY
Sbjct: 272 YSRSRER--EQKSYKNEREYRKYGETSKERSRDRTERERSKEPKI-------ISSLSNNY 322

Query: 138 KVSVNLVINNKLNDY 94
           K S     NN  N+Y
Sbjct: 323 KYSNYNNYNNNYNNY 337


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.0 bits (42), Expect = 4.5
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = +1

Query: 148 WTRMYVLCSLLLNFSQFGLVAVDGVFVTLDL 240
           W    V+C ++  F  FGL     V V + +
Sbjct: 104 WKAGDVMCRIMAFFRMFGLYLSSFVLVCISM 134


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = -2

Query: 312 YKKQKEQLHELKTHLDKEINFHSE 241
           Y  +++ ++EL  H+D+   +H E
Sbjct: 31  YVTRQKNIYELFWHVDQPTVYHPE 54


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = -2

Query: 312 YKKQKEQLHELKTHLDKEINFHSE 241
           Y  +++ ++EL  H+D+   +H E
Sbjct: 31  YVTRQKNIYELFWHVDQPTVYHPE 54


>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 116 ITRLTDTL*FDGLECMCYVHFFSISASLV 202
           +T LTD L  +  +C   +   SIS  LV
Sbjct: 168 LTTLTDCLRSELAQCESNIKVISISPDLV 196


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -2

Query: 336 CTEKKNTFYKKQKEQLHELKTHLDKEI 256
           CT+ K  + +K+KE L  +    D  I
Sbjct: 21  CTQGKVNYREKEKEVLDNILGGYDARI 47


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -2

Query: 336 CTEKKNTFYKKQKEQLHELKTHLDKEI 256
           CT+ K  + +K+KE L  +    D  I
Sbjct: 21  CTQGKVNYREKEKEVLDNILGGYDARI 47


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 9/29 (31%), Positives = 12/29 (41%)
 Frame = -2

Query: 345  LGACTEKKNTFYKKQKEQLHELKTHLDKE 259
            LG C     T Y +     H  K H+ K+
Sbjct: 1463 LGPCWHAVMTTYPRINPDNHNEKLHIPKD 1491


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,759
Number of Sequences: 438
Number of extensions: 1725
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8556345
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)