Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_K12
(533 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_05_0265 + 20188160-20188211,20188291-20189019,20189103-201892... 117 7e-27
05_03_0079 + 8212648-8212724,8212844-8212993,8213211-8213351,821... 107 7e-24
02_05_1080 - 33955034-33955117,33955199-33955300,33955381-339555... 91 5e-19
05_05_0208 + 23275931-23275996,23276084-23276196,23276279-232764... 85 3e-17
05_05_0138 + 22644263-22644460,22644617-22644711,22645786-226459... 84 8e-17
11_04_0331 + 16456577-16456579,16456664-16456911,16457625-164578... 78 4e-15
06_01_0809 - 6100025-6100251,6100456-6100565,6100919-6100986,610... 78 4e-15
12_02_0768 - 22988119-22988223,22988337-22988558,22988645-229888... 47 1e-05
02_04_0271 + 21445113-21445865,21446727-21446788,21446927-214470... 29 1.8
02_03_0234 - 16696440-16696658,16696822-16696945,16698070-16698503 29 2.4
09_02_0189 - 5546840-5547082 29 3.1
05_04_0155 + 18595193-18596224,18596863-18597264 29 3.1
08_02_0159 + 13403198-13403581 28 5.4
12_02_1043 - 25646075-25646437,25646655-25647959,25648394-25648648 27 7.2
12_01_0102 - 788403-788937,789051-789164,789323-789687 27 7.2
08_01_0649 + 5607234-5608397,5609358-5609513,5609598-5609796,561... 27 7.2
04_04_1041 - 30329037-30329102,30329199-30329352,30329606-303297... 27 7.2
04_04_0858 + 28800691-28801155,28801293-28801515,28802555-28803048 27 7.2
02_04_0067 - 19425019-19425288,19425393-19425647,19425766-194259... 27 7.2
11_01_0102 - 749013-749538,749630-749749,749849-750210 27 9.5
05_04_0378 - 20785271-20785453,20785944-20786029,20786347-20786389 27 9.5
>01_05_0265 + 20188160-20188211,20188291-20189019,20189103-20189231,
20189857-20189938,20190034-20190166,20190269-20190340,
20190478-20190573,20190651-20190764,20190838-20191050,
20191144-20191242,20191328-20191488,20191589-20191685,
20191828-20191989,20192068-20192148,20192242-20192320,
20192414-20192550,20192638-20192688,20192776-20192844,
20193583-20193700,20194142-20194197
Length = 909
Score = 117 bits (281), Expect = 7e-27
Identities = 66/178 (37%), Positives = 98/178 (55%), Gaps = 4/178 (2%)
Frame = +3
Query: 9 ISIAKAGIMTCLNARVSILAAANPAYGRYNPKRTIEQNIQLPAALLSRFDLLWLIQDKPN 188
+SIAKAGI+ LNAR S+LA ANP RYNP+ ++ NI LP LLSRFDL++LI DK +
Sbjct: 580 VSIAKAGIIASLNARTSVLACANPTESRYNPRLSVIDNIHLPPTLLSRFDLIYLILDKAD 639
Query: 189 REKDLELAKHIAYVHQHSTQPPSETRALSMRLVRRYVALTKRK-QPVVPTALADYIVSSY 365
+ D LAKHI +H + E L + + Y++ ++ QP + A+ + Y
Sbjct: 640 EQTDRRLAKHIVSLHFENPN-IEELEVLDLPTLVAYISYARKHIQPQLSDEAAEELTRGY 698
Query: 366 VELRREAR---NARDVTFTSARNXXXXXXXXXXXXXXXXSDVVEKEDVSEAIRLVEMS 530
VE+R+ + + V +AR S++VE +DV EA RL+E++
Sbjct: 699 VEMRKRGNSPGSRKKVITATARQIESLIRLSEALARMRFSEMVEVQDVVEAFRLLEVA 756
>05_03_0079 +
8212648-8212724,8212844-8212993,8213211-8213351,
8213658-8213820,8213901-8214094,8214174-8214369,
8214462-8214539,8214933-8215162,8215574-8215688,
8215878-8215952,8216032-8216172,8216309-8216512,
8216586-8216747,8216787-8216794,8217099-8217223,
8217316-8217438,8218177-8218307,8218527-8218658
Length = 814
Score = 107 bits (256), Expect = 7e-24
Identities = 55/124 (44%), Positives = 77/124 (62%)
Frame = +3
Query: 9 ISIAKAGIMTCLNARVSILAAANPAYGRYNPKRTIEQNIQLPAALLSRFDLLWLIQDKPN 188
ISI KAGI LNAR SILAAANP GRY+ + ++ N+ LP A+LSRFDL++++ D+P+
Sbjct: 485 ISITKAGIQATLNARTSILAAANPTGGRYDKSKPLKYNVALPPAILSRFDLVYIMIDEPD 544
Query: 189 REKDLELAKHIAYVHQHSTQPPSETRALSMRLVRRYVALTKRKQPVVPTALADYIVSSYV 368
D +A HI VHQ + + A S ++RY+A K +P + + +V SYV
Sbjct: 545 ENTDYHIAHHIVRVHQKREE--ALAPAFSTAELKRYIAFAKSLKPQLSSEAKKVLVESYV 602
Query: 369 ELRR 380
LRR
Sbjct: 603 TLRR 606
>02_05_1080 -
33955034-33955117,33955199-33955300,33955381-33955510,
33955674-33955783,33955827-33955950,33956042-33956136,
33956205-33956300,33956419-33956551,33956668-33956759,
33956844-33956948,33957201-33957335,33957421-33957526,
33957621-33957748,33957860-33957958,33958049-33958228,
33958303-33958446,33958533-33958647,33958739-33958905
Length = 714
Score = 91.1 bits (216), Expect = 5e-19
Identities = 51/141 (36%), Positives = 79/141 (56%), Gaps = 3/141 (2%)
Frame = +3
Query: 9 ISIAKAGIMTCLNARVSILAAANPAYGRYNPKRTIEQNIQLPAALLSRFDLLWLIQDKPN 188
ISIAKAGI T LN+R S+LAAANP GRY+ +T + NI L +LSRFDL+++++D
Sbjct: 436 ISIAKAGITTVLNSRTSVLAAANPIAGRYDDLKTAQDNIDLQTTILSRFDLIFIVKDVRM 495
Query: 189 REKDLELAKHIAYVHQHSTQPPSETRALS--MRLVRRYVALTK-RKQPVVPTALADYIVS 359
++D +A HI VH S+ S ++RY+ + +P + A+ + +
Sbjct: 496 YDQDKRIASHIIKVHASGAAASSKNTDASEGENWLKRYIEYCRVTCKPRLSEKAAEMLQN 555
Query: 360 SYVELRREARNARDVTFTSAR 422
YVE+R+ ++ T R
Sbjct: 556 KYVEIRQARAKDFSLSLTKMR 576
>05_05_0208 +
23275931-23275996,23276084-23276196,23276279-23276459,
23276590-23276674,23276974-23277104,23277194-23277432,
23277512-23277748,23277838-23277992,23278039-23278271,
23278359-23278521,23278613-23278818,23278960-23279019,
23279106-23279198,23279406-23279569,23280070-23280138,
23280241-23280382,23280490-23280546
Length = 797
Score = 85.0 bits (201), Expect = 3e-17
Identities = 39/79 (49%), Positives = 59/79 (74%)
Frame = +3
Query: 9 ISIAKAGIMTCLNARVSILAAANPAYGRYNPKRTIEQNIQLPAALLSRFDLLWLIQDKPN 188
++IAKAGI LNAR S++AAANP YG Y+ T +NI LP +LLSRFDLL+++ D+ +
Sbjct: 453 VTIAKAGIHASLNARCSVIAAANPIYGTYDRSLTPTKNIGLPDSLLSRFDLLFIVLDQMD 512
Query: 189 REKDLELAKHIAYVHQHST 245
E D ++++H+A +H++ T
Sbjct: 513 PEIDRQISEHVARMHRYCT 531
Score = 30.7 bits (66), Expect = 0.77
Identities = 23/96 (23%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Frame = +3
Query: 255 SETRALSMRLVRRYVALTKRK-QPVVPTALADYIVSSYVELRREARNARDVTFT---SAR 422
S+ L+++ +++Y+ K QP + +D+I +SY ELR NA+ T +AR
Sbjct: 575 SKQDRLTVKFLKKYIHYAKNLIQPRLTDEASDHIATSYAELRDGGANAKSGGGTLPITAR 634
Query: 423 NXXXXXXXXXXXXXXXXSDVVEKEDVSEAIRLVEMS 530
V K DV A++++ +
Sbjct: 635 TLETIIRLSTAHAKMKLRHEVLKTDVEAALQVLNFA 670
>05_05_0138 +
22644263-22644460,22644617-22644711,22645786-22645949,
22646725-22646970,22647600-22647944,22648516-22648586,
22648676-22648794,22650508-22650637,22650806-22650857,
22650974-22651136,22651244-22651418,22651772-22651942,
22652275-22652388,22652559-22652609
Length = 697
Score = 83.8 bits (198), Expect = 8e-17
Identities = 40/101 (39%), Positives = 68/101 (67%)
Frame = +3
Query: 9 ISIAKAGIMTCLNARVSILAAANPAYGRYNPKRTIEQNIQLPAALLSRFDLLWLIQDKPN 188
+S+AKAG++ L+AR S+LAAANP G Y+ +T+ +N+++ AALLSRFDL++++ DKP+
Sbjct: 384 VSVAKAGLVASLSARTSVLAAANPVGGHYDRAKTVNENLKMSAALLSRFDLVFILLDKPD 443
Query: 189 REKDLELAKHIAYVHQHSTQPPSETRALSMRLVRRYVALTK 311
D ++ HI +H + P + + + R V ++ A T+
Sbjct: 444 ELLDKRVSDHIIALHSNDGGPFTANKRI--RTVPQFNASTE 482
>11_04_0331 + 16456577-16456579,16456664-16456911,16457625-16457812,
16458293-16458489,16458579-16458768,16458865-16459084,
16459169-16459376,16459508-16459642,16459725-16459916,
16459999-16460171,16460266-16460454,16460539-16460655,
16460734-16460818,16460900-16461052,16461135-16461260,
16461391-16461573,16461823-16461984,16462098-16462214
Length = 961
Score = 78.2 bits (184), Expect = 4e-15
Identities = 61/194 (31%), Positives = 94/194 (48%), Gaps = 23/194 (11%)
Frame = +3
Query: 9 ISIAKAGIMTCLNARVSILAAANPAYGRYNPKRTIEQNIQLPAALLSRFDLLWLIQDKPN 188
ISI+KAGI+T L AR S++AAANP GRY+ +T QN++L ++SRFD+L +++D +
Sbjct: 660 ISISKAGIVTSLQARCSVIAAANPIGGRYDSSKTFTQNVELTDPIISRFDVLCVVKDIVD 719
Query: 189 REKDLELAKHIAYVHQHSTQP---------PSETR-------------ALSMRLVRRYVA 302
D LA+ + H S QP P++ LS ++++Y+
Sbjct: 720 PFTDEMLARFVVDSHARS-QPKGANLEDRVPTDVEDDPLAAARQADPDILSQDMLKKYIT 778
Query: 303 LTKRKQ-PVVPTALADYIVSSYVELRREARNARDVTFTSARNXXXXXXXXXXXXXXXXSD 479
K P + A D I Y ELRRE+ + + V + R+
Sbjct: 779 YAKLNVFPKIHDADLDKISHVYAELRRESSHGQGVPI-AVRHIESIIRMSEAHARMHLRS 837
Query: 480 VVEKEDVSEAIRLV 521
V +EDV AIR++
Sbjct: 838 YVSQEDVDMAIRVL 851
>06_01_0809 -
6100025-6100251,6100456-6100565,6100919-6100986,
6101108-6101229,6101446-6101527,6101629-6101695,
6102811-6102883,6103032-6103148,6104167-6104259,
6104430-6104495,6105121-6105218,6105917-6106016,
6106486-6106660,6106828-6106894,6107574-6107712,
6107830-6107926,6107992-6108130,6108212-6108363
Length = 663
Score = 78.2 bits (184), Expect = 4e-15
Identities = 46/133 (34%), Positives = 78/133 (58%), Gaps = 4/133 (3%)
Frame = +3
Query: 9 ISIAKAGIMTCLNARVSILAAANPAYGRYNPKRTIEQNIQLPAALLSRFDLLWLIQDKPN 188
ISIAKAG++T LN R ++ A NP G+Y+P ++ N L LLSRFD++ ++ D N
Sbjct: 457 ISIAKAGLVTTLNTRTTVFGATNPK-GQYDPNESLSVNTTLSGPLLSRFDIVLVLLDTKN 515
Query: 189 REKDLELAKHI-AYVHQHSTQPPSETRAL-SMRLVRRYVALTKRKQPVVPTALADYIVSS 362
++ D ++ HI A + S+ + ++ ++RRY+ K+ V T A+ ++SS
Sbjct: 516 KKWDKIVSSHILAENTEEKKGKTSDPEVMWTLSMLRRYIHYVKQHFKPVLTKEAERVISS 575
Query: 363 YVELRREA--RNA 395
Y + +R++ RNA
Sbjct: 576 YYQRQRQSGTRNA 588
>12_02_0768 -
22988119-22988223,22988337-22988558,22988645-22988810,
22989176-22989181,22989281-22989453,22989737-22989928,
22990034-22990211,22990302-22990444,22990666-22990755,
22990869-22990991,22991391-22991568,22992213-22992442,
22992557-22992616,22992731-22992798,22992908-22992953
Length = 659
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/28 (75%), Positives = 25/28 (89%)
Frame = +3
Query: 9 ISIAKAGIMTCLNARVSILAAANPAYGR 92
+SIAKAGI T LNAR ++LAAANPA+GR
Sbjct: 469 VSIAKAGITTSLNARTAVLAAANPAWGR 496
>02_04_0271 +
21445113-21445865,21446727-21446788,21446927-21447027,
21447165-21447248,21448054-21448058,21448193-21448267,
21448339-21448416,21448896-21448952,21449351-21449421,
21449529-21449628,21449758-21449862,21450004-21450066,
21450144-21450266,21450371-21450514,21450598-21450672
Length = 631
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +1
Query: 376 VARRVTRVTSLSRQPAICSPYCVSPPHWHGSDCQTW 483
+A TR S P CSP V+PPH + + W
Sbjct: 10 LAAVATRAASTLTAPECCSPAVVAPPHRRVQERRKW 45
>02_03_0234 - 16696440-16696658,16696822-16696945,16698070-16698503
Length = 258
Score = 29.1 bits (62), Expect = 2.4
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -3
Query: 99 DCTGRTRGWPPPVWRRARSG 40
DC+G + W +WRR R+G
Sbjct: 83 DCSGAAKRWRRRIWRRGRAG 102
>09_02_0189 - 5546840-5547082
Length = 80
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -3
Query: 81 RGWPPPVWRRARSGTSLYPP*RYL 10
R +PP VW R R+ L PP R L
Sbjct: 41 RRYPPAVWDRRRNAPGLLPPARQL 64
>05_04_0155 + 18595193-18596224,18596863-18597264
Length = 477
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +1
Query: 109 PSSKTYS-CPPLCSHVSTYFGSYRTNLIVKRI*SWLSTLRTCTSTRPSR 252
P+ KTYS P C +V+ + S +NL++K +CT+TRP+R
Sbjct: 14 PAVKTYSKSPGYCCNVTQFQSSKCSNLVLK----------SCTATRPNR 52
>08_02_0159 + 13403198-13403581
Length = 127
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +2
Query: 47 RARLHTGGGQPRVRPVQSETNHRAKHTVARRFALTFRPTLA 169
R+R + QPR RP NH + A F TF +A
Sbjct: 57 RSRCSSSARQPRARPTSGSPNHALVLSGALGFCTTFLKCMA 97
>12_02_1043 - 25646075-25646437,25646655-25647959,25648394-25648648
Length = 640
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -3
Query: 507 LRRHLPSPPRLTI*AVPVRW 448
L RHLP PR+T+ ++ +RW
Sbjct: 462 LIRHLPELPRVTVLSLNIRW 481
>12_01_0102 - 788403-788937,789051-789164,789323-789687
Length = 337
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -1
Query: 98 IVPAVRGVGRRQYGDARVQARHYTR 24
+VP G R+YG+ ++Q H+TR
Sbjct: 136 VVPHEDGYQWRKYGEKKIQGTHFTR 160
>08_01_0649 +
5607234-5608397,5609358-5609513,5609598-5609796,
5612419-5613608,5614505-5614660,5614742-5615041
Length = 1054
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -3
Query: 120 FARWFVSDCTGRTRGWPPPVWRRARSG 40
F R S C+ R WP PVW+ G
Sbjct: 229 FERTKESICSSDNRRWPSPVWKDDNDG 255
>04_04_1041 -
30329037-30329102,30329199-30329352,30329606-30329733,
30329918-30330043,30330545-30330675,30331091-30331304,
30332056-30332061,30332216-30332246,30332410-30332867,
30332992-30333136,30333255-30333712,30336945-30337085,
30337146-30337158,30337611-30337636
Length = 698
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 46 TRASPYWRRPTPRTAGTIRNEPSSKTYSCPPLCSHVSTY 162
TR SP TP T+ ++ EP +++ SC + + S Y
Sbjct: 273 TRESPV---VTPATSSSLAKEPIARSMSCKAMAASASNY 308
>04_04_0858 + 28800691-28801155,28801293-28801515,28802555-28803048
Length = 393
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 230 APALDPAAKRDARSLHASGPAVRRAHETQ 316
+PA+ P +R HA G A R++HETQ
Sbjct: 128 SPAMSPR-RRSWEGRHAGGVAGRQSHETQ 155
>02_04_0067 -
19425019-19425288,19425393-19425647,19425766-19425937,
19426069-19426302,19426523-19426656,19427663-19427746,
19428355-19428645,19428788-19429120,19429317-19429390,
19429464-19429644,19429993-19430096,19430232-19430392,
19430727-19431040,19431583-19431864,19432431-19432732,
19433176-19433266,19433368-19433421,19438917-19438993,
19439081-19439240,19439410-19439494,19439574-19440130
Length = 1404
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -2
Query: 499 TSSFSTTSDNLSRASAVERRSMASRLRADVKVTS-RALRASRR 374
TS S+ + ++ R A +RR + RL AD++ + R LR RR
Sbjct: 75 TSVLSSEAVDVRRLGAAQRRVLVERLVADIQRDNLRLLRKQRR 117
>11_01_0102 - 749013-749538,749630-749749,749849-750210
Length = 335
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -1
Query: 104 FRIVPAVRGVGRRQYGDARVQARHYTR 24
F VP G R+YG+ ++Q H+TR
Sbjct: 135 FTPVPHEDGFQWRKYGEKKIQGTHFTR 161
>05_04_0378 - 20785271-20785453,20785944-20786029,20786347-20786389
Length = 103
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +3
Query: 168 LIQDKPNREKDLELAKHIAYVHQH--STQPP 254
+++ KPNR D L ++A V QH S PP
Sbjct: 66 IVETKPNRNMDSLLQLYVALVSQHKQSAVPP 96
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,184,854
Number of Sequences: 37544
Number of extensions: 311743
Number of successful extensions: 1167
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1163
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1190246000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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