Samia BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_K08
         (528 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1058 + 23631819-23631943,23632032-23632101,23632196-236333...    27   7.1  
09_01_0169 - 2452623-2452754,2454585-2454761                           27   9.3  

>07_03_1058 +
           23631819-23631943,23632032-23632101,23632196-23633368,
           23633469-23634266
          Length = 721

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +3

Query: 387 WIF*IIRFTLQIIRSIVY-LREKKLSKKYLSNVLLYY 494
           WI  ++    +  R IV  LR + + +KY+S V+L+Y
Sbjct: 236 WIKDLVALPFEFFRRIVLALRRQGMKEKYVSPVVLFY 272


>09_01_0169 - 2452623-2452754,2454585-2454761
          Length = 102

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = -2

Query: 410 KSNNSEDPSRGGIISC-HKIK*KYCRKCTIELDIISIIL 297
           KSNN +DPS   I++C  K+K     +  +EL  + +++
Sbjct: 54  KSNNLQDPSNRNIVNCDDKLKTVLLGRSKVELSELPMLV 92


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,448,278
Number of Sequences: 37544
Number of extensions: 163579
Number of successful extensions: 258
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 258
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1166441080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)