Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_K04
(326 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC084581-1|AAH84581.1| 163|Homo sapiens ZNF703 protein protein. 52 4e-07
BC032534-1|AAH32534.1| 590|Homo sapiens zinc finger protein 703... 52 4e-07
AK024361-1|BAB14897.1| 590|Homo sapiens protein ( Homo sapiens ... 52 4e-07
BC021165-1|AAH21165.1| 609|Homo sapiens ZNF503 protein protein. 51 7e-07
BC013011-1|AAH13011.1| 609|Homo sapiens ZNF503 protein protein. 51 7e-07
BC011625-1|AAH11625.1| 646|Homo sapiens zinc finger protein 503... 51 7e-07
BC007494-1|AAH07494.1| 283|Homo sapiens ZNF503 protein protein. 51 7e-07
AK092897-1|BAC03999.1| 406|Homo sapiens protein ( Homo sapiens ... 51 7e-07
X74874-1|CAA52862.1| 1970|Homo sapiens RNA polymerase II largest... 34 0.12
X63564-1|CAA45125.1| 1970|Homo sapiens RNA polymerase II largest... 34 0.12
AY509035-1|AAS91662.1| 1386|Homo sapiens roundabout-like protein... 33 0.27
AK024697-1|BAB14966.1| 309|Homo sapiens protein ( Homo sapiens ... 33 0.27
L12141-1|AAA58477.1| 347|Homo sapiens fork head-related protein... 32 0.36
BX538199-1|CAD98065.1| 687|Homo sapiens hypothetical protein pr... 32 0.36
AK125511-1|BAC86188.1| 559|Homo sapiens rome) (ELN). protein. 32 0.36
D38555-1|BAA07558.2| 1133|Homo sapiens KIAA0079 protein. 31 0.63
BC018928-1|AAH18928.1| 1094|Homo sapiens SEC24 related gene fami... 31 0.63
BC043222-1|AAH43222.1| 201|Homo sapiens GDF6 protein protein. 30 1.4
AJ537424-1|CAD60934.1| 455|Homo sapiens growth/differentiation ... 30 1.4
AK127255-1|BAC86902.1| 1007|Homo sapiens protein ( Homo sapiens ... 30 1.9
AC002398-4|AAB81198.1| 903|Homo sapiens F25965_3 protein. 30 1.9
D89501-1|BAA13971.1| 134|Homo sapiens PBI protein. 29 2.5
X78817-1|CAA55394.1| 946|Homo sapiens p115 protein. 29 3.3
D50921-1|BAA09480.1| 942|Homo sapiens KIAA0131 protein. 29 3.3
BC052303-1|AAH52303.1| 986|Homo sapiens ARHGAP4 protein protein. 29 3.3
BC023626-1|AAH23626.1| 356|Homo sapiens ARHGAP4 protein protein. 29 3.3
AL138781-3|CAI16879.1| 397|Homo sapiens LIM homeobox 3 protein. 29 3.3
AL138781-2|CAI16878.1| 402|Homo sapiens LIM homeobox 3 protein. 29 3.3
AF367089-1|AAL26314.1| 397|Homo sapiens LIM homeobox protein 3 ... 29 3.3
AF227969-1|AAF73914.1| 683|Homo sapiens SH2-B gamma signaling p... 29 3.3
AF227968-1|AAF73913.1| 671|Homo sapiens SH2-B beta signaling pr... 29 3.3
AF227967-1|AAF73912.1| 756|Homo sapiens SH2-B alpha signaling p... 29 3.3
AF156889-1|AAF36809.1| 402|Homo sapiens LIM homeobox protein 3 ... 29 3.3
AF156888-1|AAF36808.1| 397|Homo sapiens LIM homeobox protein 3 ... 29 3.3
AF096169-1|AAF17292.1| 370|Homo sapiens LHX3 protein protein. 29 3.3
AF096168-1|AAF17291.1| 370|Homo sapiens LHX3 protein protein. 29 3.3
AF010404-1|AAC51735.1| 4957|Homo sapiens ALR protein. 29 3.3
AF010403-1|AAC51734.1| 5262|Homo sapiens ALR protein. 29 3.3
AB037720-1|BAA92537.1| 730|Homo sapiens KIAA1299 protein protein. 29 3.3
BC027985-1|AAH27985.1| 1063|Homo sapiens MAST1 protein protein. 29 4.4
AD000092-1|AAB51171.1| 1237|Homo sapiens hypothetical human seri... 29 4.4
AB023190-1|BAA76817.1| 1583|Homo sapiens KIAA0973 protein protein. 29 4.4
U71374-1|AAD05572.1| 403|Homo sapiens HsPex13p protein. 28 5.8
BC067090-1|AAH67090.1| 403|Homo sapiens peroxisome biogenesis f... 28 5.8
AL049637-3|CAI23011.1| 467|Homo sapiens DMRT-like family A2 pro... 28 5.8
AJ301580-1|CAC37946.1| 486|Homo sapiens doublesex-mab-3 (DM) do... 28 5.8
AF048755-1|AAC39844.1| 403|Homo sapiens HsPex13p protein. 28 5.8
AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein. 28 5.8
AB022192-1|BAA88907.1| 403|Homo sapiens PEX13 protein. 28 5.8
BC096272-1|AAH96272.1| 560|Homo sapiens HIV-1 Rev binding prote... 28 7.7
AF222711-1|AAG45951.1| 985|Homo sapiens ribeye protein. 25 9.2
>BC084581-1|AAH84581.1| 163|Homo sapiens ZNF703 protein protein.
Length = 163
Score = 52.0 bits (119), Expect = 4e-07
Identities = 24/48 (50%), Positives = 30/48 (62%)
Frame = +3
Query: 174 LSASRYHPYSKAGLPAGLGASAYGAFKPALGPFYSPYAMYGQRLGAAA 317
L SRYHPY K+ L G + P GP+YSPYA+YGQRL +A+
Sbjct: 113 LGLSRYHPYGKSHLSTAGGLAVPSL--PTAGPYYSPYALYGQRLASAS 158
>BC032534-1|AAH32534.1| 590|Homo sapiens zinc finger protein 703
protein.
Length = 590
Score = 52.0 bits (119), Expect = 4e-07
Identities = 24/48 (50%), Positives = 30/48 (62%)
Frame = +3
Query: 174 LSASRYHPYSKAGLPAGLGASAYGAFKPALGPFYSPYAMYGQRLGAAA 317
L SRYHPY K+ L G + P GP+YSPYA+YGQRL +A+
Sbjct: 540 LGLSRYHPYGKSHLSTAGGLAVPSL--PTAGPYYSPYALYGQRLASAS 585
>AK024361-1|BAB14897.1| 590|Homo sapiens protein ( Homo sapiens
cDNA FLJ14299 fis, clone PLACE1010310, weakly similar to
SPIDROIN 2. ).
Length = 590
Score = 52.0 bits (119), Expect = 4e-07
Identities = 24/48 (50%), Positives = 30/48 (62%)
Frame = +3
Query: 174 LSASRYHPYSKAGLPAGLGASAYGAFKPALGPFYSPYAMYGQRLGAAA 317
L SRYHPY K+ L G + P GP+YSPYA+YGQRL +A+
Sbjct: 540 LGLSRYHPYGKSHLSTAGGLAVPSL--PTAGPYYSPYALYGQRLASAS 585
>BC021165-1|AAH21165.1| 609|Homo sapiens ZNF503 protein protein.
Length = 609
Score = 51.2 bits (117), Expect = 7e-07
Identities = 26/46 (56%), Positives = 31/46 (67%)
Frame = +3
Query: 180 ASRYHPYSKAGLPAGLGASAYGAFKPALGPFYSPYAMYGQRLGAAA 317
+SRYHPYSK+ LP GA A GP+YSPYA+YGQRL A+
Sbjct: 562 SSRYHPYSKSPLPTP-GAPV--PVPAATGPYYSPYALYGQRLTTAS 604
>BC013011-1|AAH13011.1| 609|Homo sapiens ZNF503 protein protein.
Length = 609
Score = 51.2 bits (117), Expect = 7e-07
Identities = 26/46 (56%), Positives = 31/46 (67%)
Frame = +3
Query: 180 ASRYHPYSKAGLPAGLGASAYGAFKPALGPFYSPYAMYGQRLGAAA 317
+SRYHPYSK+ LP GA A GP+YSPYA+YGQRL A+
Sbjct: 562 SSRYHPYSKSPLPTP-GAPV--PVPAATGPYYSPYALYGQRLTTAS 604
>BC011625-1|AAH11625.1| 646|Homo sapiens zinc finger protein 503
protein.
Length = 646
Score = 51.2 bits (117), Expect = 7e-07
Identities = 26/46 (56%), Positives = 31/46 (67%)
Frame = +3
Query: 180 ASRYHPYSKAGLPAGLGASAYGAFKPALGPFYSPYAMYGQRLGAAA 317
+SRYHPYSK+ LP GA A GP+YSPYA+YGQRL A+
Sbjct: 599 SSRYHPYSKSPLPTP-GAPV--PVPAATGPYYSPYALYGQRLTTAS 641
>BC007494-1|AAH07494.1| 283|Homo sapiens ZNF503 protein protein.
Length = 283
Score = 51.2 bits (117), Expect = 7e-07
Identities = 26/46 (56%), Positives = 31/46 (67%)
Frame = +3
Query: 180 ASRYHPYSKAGLPAGLGASAYGAFKPALGPFYSPYAMYGQRLGAAA 317
+SRYHPYSK+ LP GA A GP+YSPYA+YGQRL A+
Sbjct: 236 SSRYHPYSKSPLPTP-GAPV--PVPAATGPYYSPYALYGQRLTTAS 278
>AK092897-1|BAC03999.1| 406|Homo sapiens protein ( Homo sapiens
cDNA FLJ35578 fis, clone SPLEN2006325, weakly similar to
Zinc finger protein nocA. ).
Length = 406
Score = 51.2 bits (117), Expect = 7e-07
Identities = 26/46 (56%), Positives = 31/46 (67%)
Frame = +3
Query: 180 ASRYHPYSKAGLPAGLGASAYGAFKPALGPFYSPYAMYGQRLGAAA 317
+SRYHPYSK+ LP GA A GP+YSPYA+YGQRL A+
Sbjct: 359 SSRYHPYSKSPLPTP-GAPV--PVPAATGPYYSPYALYGQRLTTAS 401
>X74874-1|CAA52862.1| 1970|Homo sapiens RNA polymerase II largest
subunit protein.
Length = 1970
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/80 (25%), Positives = 32/80 (40%)
Frame = +3
Query: 51 SHTTDGATPSSTSTPSILNPLNPLFTNAGLRSAYPTGPLSPLSASRYHPYSKAGLPAGLG 230
S T TP + T +P +P++T + + PT P ++ +Y P S P
Sbjct: 1878 SPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYS-PTSPTYSPTSPKYSPTSPTYSPTSPK 1936
Query: 231 ASAYGAFKPALGPFYSPYAM 290
S Y P P Y++
Sbjct: 1937 GSTYSPTSPGYSPTSPTYSL 1956
>X63564-1|CAA45125.1| 1970|Homo sapiens RNA polymerase II largest
subunit protein.
Length = 1970
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/80 (25%), Positives = 32/80 (40%)
Frame = +3
Query: 51 SHTTDGATPSSTSTPSILNPLNPLFTNAGLRSAYPTGPLSPLSASRYHPYSKAGLPAGLG 230
S T TP + T +P +P++T + + PT P ++ +Y P S P
Sbjct: 1878 SPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYS-PTSPTYSPTSPKYSPTSPTYSPTSPK 1936
Query: 231 ASAYGAFKPALGPFYSPYAM 290
S Y P P Y++
Sbjct: 1937 GSTYSPTSPGYSPTSPTYSL 1956
>AY509035-1|AAS91662.1| 1386|Homo sapiens roundabout-like protein 3
protein.
Length = 1386
Score = 32.7 bits (71), Expect = 0.27
Identities = 27/75 (36%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +3
Query: 66 GATPSSTSTPSILNPLNPLFTNAGLRSA---YPTGPLSPLSASRYHPYSKAGLPAGLGAS 236
G ++T TPS +P P L P GP SPLS S+ + PAGLGA
Sbjct: 1149 GQQSTATLTPSPPDPPQPPTDMPHLHQMPRRVPLGPSSPLSVSQPMLGIREARPAGLGAG 1208
Query: 237 AYGAFKPALGPFYSP 281
A P L P +P
Sbjct: 1209 P--AASPHLSPSPAP 1221
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +3
Query: 162 PLSPLSASRYHPYSKAGLPAGLGASAYGAFKPALGPFYSPYAMYGQRL 305
P +P RY Y++AG+ L +A G P GP YS G+ L
Sbjct: 984 PSNPDPDDRY--YNEAGISLYLAQTARGTAAPGEGPVYSTIDPAGEEL 1029
>AK024697-1|BAB14966.1| 309|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21044 fis, clone CAE11659. ).
Length = 309
Score = 32.7 bits (71), Expect = 0.27
Identities = 27/75 (36%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +3
Query: 66 GATPSSTSTPSILNPLNPLFTNAGLRSA---YPTGPLSPLSASRYHPYSKAGLPAGLGAS 236
G ++T TPS +P P L P GP SPLS S+ + PAGLGA
Sbjct: 74 GQQSTATLTPSPPDPPQPPTDMPHLHQMPRRVPLGPSSPLSVSQPMLGIREARPAGLGAG 133
Query: 237 AYGAFKPALGPFYSP 281
A P L P +P
Sbjct: 134 P--AASPHLSPSPAP 146
>L12141-1|AAA58477.1| 347|Homo sapiens fork head-related protein
protein.
Length = 347
Score = 32.3 bits (70), Expect = 0.36
Identities = 25/70 (35%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Frame = +3
Query: 72 TPSSTSTP----SILNPLNPLFTNAGLRSAYPTGPLS-PLSASRYHP-YSKAGLPAGLGA 233
TP T P LNPL+ + S P+GPL+ P A+ P + GL G +
Sbjct: 29 TPVPTMAPLNSYMTLNPLSSPYPGGLPASPLPSGPLAPPAPAAPLGPTFPGLGLSGGSSS 88
Query: 234 SAYGAFKPAL 263
S YGA P L
Sbjct: 89 SGYGAPGPGL 98
>BX538199-1|CAD98065.1| 687|Homo sapiens hypothetical protein
protein.
Length = 687
Score = 32.3 bits (70), Expect = 0.36
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +3
Query: 132 AGLRSAYPTGPLSPLSASRYHPYSKAGLPAGL-GASAYGAFKPALGPFYSP 281
AGL +A P + L S HP G+P + G G F PALGP P
Sbjct: 12 AGLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPALGPGGKP 62
>AK125511-1|BAC86188.1| 559|Homo sapiens rome) (ELN). protein.
Length = 559
Score = 32.3 bits (70), Expect = 0.36
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +3
Query: 132 AGLRSAYPTGPLSPLSASRYHPYSKAGLPAGL-GASAYGAFKPALGPFYSP 281
AGL +A P + L S HP G+P + G G F PALGP P
Sbjct: 2 AGLTAAAPRPGVLLLLLSILHPSRPGGVPGAIPGGVPGGVFYPALGPGGKP 52
>D38555-1|BAA07558.2| 1133|Homo sapiens KIAA0079 protein.
Length = 1133
Score = 31.5 bits (68), Expect = 0.63
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 93 PSILNPLNPLFTNAGLRSAYPTGPLSPLSASRYHP 197
P+ L + F N+GL +YP G PLS ++ HP
Sbjct: 171 PTSLASASGSFPNSGLYGSYPQGQAPPLSQAQGHP 205
>BC018928-1|AAH18928.1| 1094|Homo sapiens SEC24 related gene family,
member C (S. cerevisiae) protein.
Length = 1094
Score = 31.5 bits (68), Expect = 0.63
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 93 PSILNPLNPLFTNAGLRSAYPTGPLSPLSASRYHP 197
P+ L + F N+GL +YP G PLS ++ HP
Sbjct: 163 PTSLASASGSFPNSGLYGSYPQGQAPPLSQAQGHP 197
>BC043222-1|AAH43222.1| 201|Homo sapiens GDF6 protein protein.
Length = 201
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 33 VIQHLRSHTTDGATPSSTSTPSILNPLNPLFTNAGLRSAY 152
+IQ L + G+TP S P+ L P++ L+ +AG Y
Sbjct: 148 IIQTLMNSMDPGSTPPSCCVPTKLTPISILYIDAGNNVVY 187
>AJ537424-1|CAD60934.1| 455|Homo sapiens growth/differentiation
factor 6 precursor protein.
Length = 455
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 33 VIQHLRSHTTDGATPSSTSTPSILNPLNPLFTNAGLRSAY 152
+IQ L + G+TP S P+ L P++ L+ +AG Y
Sbjct: 402 IIQTLMNSMDPGSTPPSCCVPTKLTPISILYIDAGNNVVY 441
>AK127255-1|BAC86902.1| 1007|Homo sapiens protein ( Homo sapiens
cDNA FLJ45322 fis, clone BRHIP3006294, moderately
similar to Mus musculus Cdc42 GTPase-activating protein
(Cdgap). ).
Length = 1007
Score = 29.9 bits (64), Expect = 1.9
Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 6/75 (8%)
Frame = +3
Query: 63 DGATPSSTSTPSILNPLNPLFTNAGLRSAYPTGPLSPLSASRYHPYSKAGLPAGL----- 227
D A P+S + P+ + P T + PT P SP + P + + PA L
Sbjct: 618 DPAPPASPAPPAPASAFPPRVTPQAISPRGPTSPASPAALDISEPLAVSVPPAVLELLGA 677
Query: 228 -GASAYGAFKPALGP 269
GA A PAL P
Sbjct: 678 GGAPASATPTPALSP 692
>AC002398-4|AAB81198.1| 903|Homo sapiens F25965_3 protein.
Length = 903
Score = 29.9 bits (64), Expect = 1.9
Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 6/75 (8%)
Frame = +3
Query: 63 DGATPSSTSTPSILNPLNPLFTNAGLRSAYPTGPLSPLSASRYHPYSKAGLPAGL----- 227
D A P+S + P+ + P T + PT P SP + P + + PA L
Sbjct: 399 DPAPPASPAPPAPASAFPPRVTPQAISPRGPTSPASPAALDISEPLAVSVPPAVLELLGA 458
Query: 228 -GASAYGAFKPALGP 269
GA A PAL P
Sbjct: 459 GGAPASATPTPALSP 473
>D89501-1|BAA13971.1| 134|Homo sapiens PBI protein.
Length = 134
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +3
Query: 135 GLRSAYPTGPLSPLSASRYHPYSKAGLPAGLGAS-AYGAFKPALGPFYSP 281
G R YP GPL+P R+ P+ +P G F P L P Y P
Sbjct: 25 GPRGPYPPGPLAPPPPPRF-PFGTGFVPPPHPPPYGPGRFPPPLSPPYGP 73
>X78817-1|CAA55394.1| 946|Homo sapiens p115 protein.
Length = 946
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +3
Query: 48 RSHTTDGATPSSTSTPSI--LNPLNPLFTNAGLRSAYPTGPLSPLSASRYHP 197
++ G P+ST++PS +P P + G + GP +P S S HP
Sbjct: 885 KTSVRQGLGPASTTSPSPGPRSPKAPPSSRLGRNKGFSRGPGAPASPSASHP 936
>D50921-1|BAA09480.1| 942|Homo sapiens KIAA0131 protein.
Length = 942
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +3
Query: 48 RSHTTDGATPSSTSTPSI--LNPLNPLFTNAGLRSAYPTGPLSPLSASRYHP 197
++ G P+ST++PS +P P + G + GP +P S S HP
Sbjct: 881 KTSVRQGLGPASTTSPSPGPRSPKAPPSSRLGRNKGFSRGPGAPASPSASHP 932
>BC052303-1|AAH52303.1| 986|Homo sapiens ARHGAP4 protein protein.
Length = 986
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +3
Query: 48 RSHTTDGATPSSTSTPSI--LNPLNPLFTNAGLRSAYPTGPLSPLSASRYHP 197
++ G P+ST++PS +P P + G + GP +P S S HP
Sbjct: 925 KTSVRQGLGPASTTSPSPGPRSPKAPPSSRLGRNKGFSRGPGAPASPSASHP 976
>BC023626-1|AAH23626.1| 356|Homo sapiens ARHGAP4 protein protein.
Length = 356
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +3
Query: 48 RSHTTDGATPSSTSTPSI--LNPLNPLFTNAGLRSAYPTGPLSPLSASRYHP 197
++ G P+ST++PS +P P + G + GP +P S S HP
Sbjct: 295 KTSVRQGLGPASTTSPSPGPRSPKAPPSSRLGRNKGFSRGPGAPASPSASHP 346
>AL138781-3|CAI16879.1| 397|Homo sapiens LIM homeobox 3 protein.
Length = 397
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -2
Query: 268 GPSAGLNAP*AEAPKPAGRPAFE*G*YRLAESGLSGPVGY 149
GP+ GL E + GRP+ G + L GL+GP Y
Sbjct: 267 GPANGLYGSLGEPTQALGRPSGALGNFSLEHGGLAGPEQY 306
>AL138781-2|CAI16878.1| 402|Homo sapiens LIM homeobox 3 protein.
Length = 402
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -2
Query: 268 GPSAGLNAP*AEAPKPAGRPAFE*G*YRLAESGLSGPVGY 149
GP+ GL E + GRP+ G + L GL+GP Y
Sbjct: 272 GPANGLYGSLGEPTQALGRPSGALGNFSLEHGGLAGPEQY 311
>AF367089-1|AAL26314.1| 397|Homo sapiens LIM homeobox protein 3
protein.
Length = 397
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -2
Query: 268 GPSAGLNAP*AEAPKPAGRPAFE*G*YRLAESGLSGPVGY 149
GP+ GL E + GRP+ G + L GL+GP Y
Sbjct: 267 GPANGLYGSLGEPTQALGRPSGALGNFSLEHGGLAGPEQY 306
>AF227969-1|AAF73914.1| 683|Homo sapiens SH2-B gamma signaling
protein protein.
Length = 683
Score = 29.1 bits (62), Expect = 3.3
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = +3
Query: 45 LRSHTTDGATPSSTSTPSILNPLNPLFT----NAGLRSAYPTGPLSPLSASRYHPYSKAG 212
L+ + A S + +P IL PL+P + L S GPL+ L SR
Sbjct: 73 LQHFEAEVARASGSLSPPILAPLSPGAEISPHDLSLESCRVGGPLAVLGPSRSSEDLAGP 132
Query: 213 LPAGLGASAYGAFKPALGPFYS 278
LP+ + +S+ + KP L +S
Sbjct: 133 LPSSVSSSSTTSSKPKLKKRFS 154
>AF227968-1|AAF73913.1| 671|Homo sapiens SH2-B beta signaling
protein protein.
Length = 671
Score = 29.1 bits (62), Expect = 3.3
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = +3
Query: 45 LRSHTTDGATPSSTSTPSILNPLNPLFT----NAGLRSAYPTGPLSPLSASRYHPYSKAG 212
L+ + A S + +P IL PL+P + L S GPL+ L SR
Sbjct: 73 LQHFEAEVARASGSLSPPILAPLSPGAEISPHDLSLESCRVGGPLAVLGPSRSSEDLAGP 132
Query: 213 LPAGLGASAYGAFKPALGPFYS 278
LP+ + +S+ + KP L +S
Sbjct: 133 LPSSVSSSSTTSSKPKLKKRFS 154
>AF227967-1|AAF73912.1| 756|Homo sapiens SH2-B alpha signaling
protein protein.
Length = 756
Score = 29.1 bits (62), Expect = 3.3
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = +3
Query: 45 LRSHTTDGATPSSTSTPSILNPLNPLFT----NAGLRSAYPTGPLSPLSASRYHPYSKAG 212
L+ + A S + +P IL PL+P + L S GPL+ L SR
Sbjct: 73 LQHFEAEVARASGSLSPPILAPLSPGAEISPHDLSLESCRVGGPLAVLGPSRSSEDLAGP 132
Query: 213 LPAGLGASAYGAFKPALGPFYS 278
LP+ + +S+ + KP L +S
Sbjct: 133 LPSSVSSSSTTSSKPKLKKRFS 154
>AF156889-1|AAF36809.1| 402|Homo sapiens LIM homeobox protein 3
isoform b protein.
Length = 402
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -2
Query: 268 GPSAGLNAP*AEAPKPAGRPAFE*G*YRLAESGLSGPVGY 149
GP+ GL E + GRP+ G + L GL+GP Y
Sbjct: 272 GPANGLYGSLGEPTQALGRPSGALGNFSLEHGGLAGPEQY 311
>AF156888-1|AAF36808.1| 397|Homo sapiens LIM homeobox protein 3
isoform a protein.
Length = 397
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -2
Query: 268 GPSAGLNAP*AEAPKPAGRPAFE*G*YRLAESGLSGPVGY 149
GP+ GL E + GRP+ G + L GL+GP Y
Sbjct: 267 GPANGLYGSLGEPTQALGRPSGALGNFSLEHGGLAGPEQY 306
>AF096169-1|AAF17292.1| 370|Homo sapiens LHX3 protein protein.
Length = 370
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -2
Query: 268 GPSAGLNAP*AEAPKPAGRPAFE*G*YRLAESGLSGPVGY 149
GP+ GL E + GRP+ G + L GL+GP Y
Sbjct: 240 GPANGLYGSLGEPTQALGRPSGALGNFSLEHGGLAGPEQY 279
>AF096168-1|AAF17291.1| 370|Homo sapiens LHX3 protein protein.
Length = 370
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -2
Query: 268 GPSAGLNAP*AEAPKPAGRPAFE*G*YRLAESGLSGPVGY 149
GP+ GL E + GRP+ G + L GL+GP Y
Sbjct: 240 GPANGLYGSLGEPTQALGRPSGALGNFSLEHGGLAGPEQY 279
>AF010404-1|AAC51735.1| 4957|Homo sapiens ALR protein.
Length = 4957
Score = 29.1 bits (62), Expect = 3.3
Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Frame = +3
Query: 135 GLRSAYPTGPLSPLSASRYHPY-SKAGLPAG---LGASAY-GAFKPALGPFYS 278
GL AYP P P + Y PY S G PA LGAS+ GA +P G F++
Sbjct: 1598 GLAPAYPLEPRFPTAPPTYPPYPSPTGAPAQPPMLGASSRPGAGQP--GEFHT 1648
>AF010403-1|AAC51734.1| 5262|Homo sapiens ALR protein.
Length = 5262
Score = 29.1 bits (62), Expect = 3.3
Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Frame = +3
Query: 135 GLRSAYPTGPLSPLSASRYHPY-SKAGLPAG---LGASAY-GAFKPALGPFYS 278
GL AYP P P + Y PY S G PA LGAS+ GA +P G F++
Sbjct: 1903 GLAPAYPLEPRFPTAPPTYPPYPSPTGAPAQPPMLGASSRPGAGQP--GEFHT 1953
>AB037720-1|BAA92537.1| 730|Homo sapiens KIAA1299 protein protein.
Length = 730
Score = 29.1 bits (62), Expect = 3.3
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = +3
Query: 45 LRSHTTDGATPSSTSTPSILNPLNPLFT----NAGLRSAYPTGPLSPLSASRYHPYSKAG 212
L+ + A S + +P IL PL+P + L S GPL+ L SR
Sbjct: 132 LQHFEAEVARASGSLSPPILAPLSPGAEISPHDLSLESCRVGGPLAVLGPSRSSEDLAGP 191
Query: 213 LPAGLGASAYGAFKPALGPFYS 278
LP+ + +S+ + KP L +S
Sbjct: 192 LPSSVSSSSTTSSKPKLKKRFS 213
>BC027985-1|AAH27985.1| 1063|Homo sapiens MAST1 protein protein.
Length = 1063
Score = 28.7 bits (61), Expect = 4.4
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = +3
Query: 39 QHLRSHTTDGATPSSTSTP-SILNPLNPLFTNAGLRSAYPTGPLSPLSASRYHPYSKAGL 215
+H T DG + + + L+P+ T S PL P+ P +KA +
Sbjct: 883 RHQSVQTEDGTGGMARAVAKAALSPVQEHETGRRSSSGEAGTPLVPIVVEPARPGAKAVV 942
Query: 216 PAGLGASAYGAFKPA 260
P LGA + G +PA
Sbjct: 943 PQPLGADSKGLQEPA 957
>AD000092-1|AAB51171.1| 1237|Homo sapiens hypothetical human
serine-threonine protein kinase R31240_1 protein.
Length = 1237
Score = 28.7 bits (61), Expect = 4.4
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = +3
Query: 39 QHLRSHTTDGATPSSTSTP-SILNPLNPLFTNAGLRSAYPTGPLSPLSASRYHPYSKAGL 215
+H T DG + + + L+P+ T S PL P+ P +KA +
Sbjct: 1057 RHQSVQTEDGTGGMARAVAKAALSPVQEHETGRRSSSGEAGTPLVPIVVEPARPGAKAVV 1116
Query: 216 PAGLGASAYGAFKPA 260
P LGA + G +PA
Sbjct: 1117 PQPLGADSKGLQEPA 1131
>AB023190-1|BAA76817.1| 1583|Homo sapiens KIAA0973 protein protein.
Length = 1583
Score = 28.7 bits (61), Expect = 4.4
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = +3
Query: 39 QHLRSHTTDGATPSSTSTP-SILNPLNPLFTNAGLRSAYPTGPLSPLSASRYHPYSKAGL 215
+H T DG + + + L+P+ T S PL P+ P +KA +
Sbjct: 1403 RHQSVQTEDGTGGMARAVAKAALSPVQEHETGRRSSSGEAGTPLVPIVVEPARPGAKAVV 1462
Query: 216 PAGLGASAYGAFKPA 260
P LGA + G +PA
Sbjct: 1463 PQPLGADSKGLQEPA 1477
>U71374-1|AAD05572.1| 403|Homo sapiens HsPex13p protein.
Length = 403
Score = 28.3 bits (60), Expect = 5.8
Identities = 19/60 (31%), Positives = 25/60 (41%)
Frame = +3
Query: 117 PLFTNAGLRSAYPTGPLSPLSASRYHPYSKAGLPAGLGASAYGAFKPALGPFYSPYAMYG 296
P F +A L T P P + +R P G+S+ F+PA F S Y YG
Sbjct: 28 PTFQSADLGPTLMTRPGQP-ALTRVPPPILPRPSQQTGSSSVNTFRPAYSSFSSGYGAYG 86
>BC067090-1|AAH67090.1| 403|Homo sapiens peroxisome biogenesis
factor 13 protein.
Length = 403
Score = 28.3 bits (60), Expect = 5.8
Identities = 19/60 (31%), Positives = 25/60 (41%)
Frame = +3
Query: 117 PLFTNAGLRSAYPTGPLSPLSASRYHPYSKAGLPAGLGASAYGAFKPALGPFYSPYAMYG 296
P F +A L T P P + +R P G+S+ F+PA F S Y YG
Sbjct: 28 PTFQSADLGPTLMTRPGQP-ALTRVPPPILPRPSQQTGSSSVNTFRPAYSSFSSGYGAYG 86
>AL049637-3|CAI23011.1| 467|Homo sapiens DMRT-like family A2
protein.
Length = 467
Score = 28.3 bits (60), Expect = 5.8
Identities = 34/98 (34%), Positives = 44/98 (44%), Gaps = 16/98 (16%)
Frame = +3
Query: 81 STSTPSILNPLNPLFTNAGLRS-AYPTGP---LSPL----SASRYH--------PYSKAG 212
S S+ S +PL P ++ G + AYP G LSPL SA+ H PYS AG
Sbjct: 356 SLSSRSAFSPLQPNASHFGADAGAYPLGAPLGLSPLRLAYSAAAAHSRGLAFMAPYSTAG 415
Query: 213 LPAGLGASAYGAFKPALGPFYSPYAMYGQRLGAAAVHQ 326
L LG F+P + +S AAAVH+
Sbjct: 416 LVPTLG------FRPPMDYAFSDLMRDRSAAAAAAVHK 447
>AJ301580-1|CAC37946.1| 486|Homo sapiens doublesex-mab-3 (DM)
domain protein.
Length = 486
Score = 28.3 bits (60), Expect = 5.8
Identities = 34/98 (34%), Positives = 44/98 (44%), Gaps = 16/98 (16%)
Frame = +3
Query: 81 STSTPSILNPLNPLFTNAGLRS-AYPTGP---LSPL----SASRYH--------PYSKAG 212
S S+ S +PL P ++ G + AYP G LSPL SA+ H PYS AG
Sbjct: 375 SLSSRSAFSPLQPNASHFGADAGAYPLGAPLGLSPLRLAYSAAAAHSRGLAFMAPYSTAG 434
Query: 213 LPAGLGASAYGAFKPALGPFYSPYAMYGQRLGAAAVHQ 326
L LG F+P + +S AAAVH+
Sbjct: 435 LVPTLG------FRPPMDYAFSDLMRDRSAAAAAAVHK 466
>AF048755-1|AAC39844.1| 403|Homo sapiens HsPex13p protein.
Length = 403
Score = 28.3 bits (60), Expect = 5.8
Identities = 19/60 (31%), Positives = 25/60 (41%)
Frame = +3
Query: 117 PLFTNAGLRSAYPTGPLSPLSASRYHPYSKAGLPAGLGASAYGAFKPALGPFYSPYAMYG 296
P F +A L T P P + +R P G+S+ F+PA F S Y YG
Sbjct: 28 PTFQSADLGPTLMTRPGQP-ALTRVPPPILPRPSQQTGSSSVNTFRPAYSSFSSGYGAYG 86
>AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein.
Length = 1217
Score = 28.3 bits (60), Expect = 5.8
Identities = 26/86 (30%), Positives = 33/86 (38%), Gaps = 6/86 (6%)
Frame = +3
Query: 72 TPSSTSTPSILNPLNPLFTNAGL----RSAYPTGPLSPLSASRYHPYSKAGLPAGLGASA 239
+P T P + + F ++ L RS +PT Y KAG P G
Sbjct: 98 SPQGTKAPRFVPLTSICFPDSLLQDEERSFFPTME-EMFGGGAADDYGKAGPPEDEGDPK 156
Query: 240 YGAFKPALGPFYSPYAMY--GQRLGA 311
GA P P Y PY Y G+ GA
Sbjct: 157 AGAGPPPGPPAYDPYGPYCPGRASGA 182
>AB022192-1|BAA88907.1| 403|Homo sapiens PEX13 protein.
Length = 403
Score = 28.3 bits (60), Expect = 5.8
Identities = 19/60 (31%), Positives = 25/60 (41%)
Frame = +3
Query: 117 PLFTNAGLRSAYPTGPLSPLSASRYHPYSKAGLPAGLGASAYGAFKPALGPFYSPYAMYG 296
P F +A L T P P + +R P G+S+ F+PA F S Y YG
Sbjct: 28 PTFQSADLGPTLMTRPGQP-ALTRVPPPILPRPSQQTGSSSVNTFRPAYSSFSSGYGAYG 86
>BC096272-1|AAH96272.1| 560|Homo sapiens HIV-1 Rev binding protein
protein.
Length = 560
Score = 27.9 bits (59), Expect = 7.7
Identities = 27/92 (29%), Positives = 35/92 (38%), Gaps = 5/92 (5%)
Frame = +3
Query: 66 GATPSST-----STPSILNPLNPLFTNAGLRSAYPTGPLSPLSASRYHPYSKAGLPAGLG 230
GATPS+ + PS+ + NP TNA +A G S + + + LP
Sbjct: 428 GATPSTNPFVAAAGPSVASSTNPFQTNARGATAATFGTASMSMPTGFGTPAPYSLPTSFS 487
Query: 231 ASAYGAFKPALGPFYSPYAMYGQRLGAAAVHQ 326
S PA F A Q G AA Q
Sbjct: 488 GSFQQPAFPAQAAFPQQTAFSQQPNGFAAFGQ 519
>AF222711-1|AAG45951.1| 985|Homo sapiens ribeye protein.
Length = 985
Score = 24.6 bits (51), Expect(2) = 9.2
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +3
Query: 69 ATPSSTSTPSILNPLNPLFTNAGLRSAYPTGPLSPLSASRY 191
++P+ + + L+P +PL L + P+ PL P + Y
Sbjct: 440 SSPTPCALTARLSPTHPLQAGVALTNPGPSNPLHPGPRTAY 480
Score = 21.4 bits (43), Expect(2) = 9.2
Identities = 15/51 (29%), Positives = 20/51 (39%)
Frame = +3
Query: 168 SPLSASRYHPYSKAGLPAGLGASAYGAFKPALGPFYSPYAMYGQRLGAAAV 320
SPL + P A LG S +L +SPY +R GA +
Sbjct: 500 SPLPSPHGSPQVLRKPGAPLGPSTLPPASQSLHTPHSPYEKVARRTGAPII 550
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,553,407
Number of Sequences: 237096
Number of extensions: 865424
Number of successful extensions: 2425
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 2275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2415
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1685725862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -