Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_K02
(412 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 162 1e-40
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 162 1e-40
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 162 1e-40
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 59 1e-09
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 39 0.002
U88170-4|AAB42245.2| 425|Caenorhabditis elegans Hypothetical pr... 30 0.75
Z81476-10|CAN86579.1| 224|Caenorhabditis elegans Hypothetical p... 29 0.99
Z81476-1|CAB03921.2| 431|Caenorhabditis elegans Hypothetical pr... 29 0.99
AC006816-6|ABA00154.1| 506|Caenorhabditis elegans Hypothetical ... 29 0.99
Z73971-4|CAA98254.1| 205|Caenorhabditis elegans Hypothetical pr... 28 2.3
U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like p... 28 2.3
U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like p... 28 2.3
U29515-1|AAC06328.1| 449|Caenorhabditis elegans fem-2 protein. 28 2.3
U28412-8|AAC46598.1| 449|Caenorhabditis elegans Feminization of... 28 2.3
AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like ... 28 2.3
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 27 5.3
AC024826-6|AAF60801.1| 379|Caenorhabditis elegans Hypothetical ... 27 5.3
Z83117-6|CAN86902.1| 1931|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z83117-5|CAN86901.1| 1971|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z83117-4|CAB05572.2| 2032|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z80219-10|CAN86596.1| 1931|Caenorhabditis elegans Hypothetical p... 27 7.0
Z80219-9|CAN86595.1| 1971|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z80219-8|CAB02303.2| 2032|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z49068-4|CAC42319.1| 705|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z49068-3|CAA88862.1| 650|Caenorhabditis elegans Hypothetical pr... 27 7.0
AJ276020-1|CAC81668.1| 1971|Caenorhabditis elegans putative TRP ... 27 7.0
Z99277-6|CAB16484.1| 677|Caenorhabditis elegans Hypothetical pr... 26 9.2
U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like p... 26 9.2
AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like ... 26 9.2
AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical ... 26 9.2
AF043699-7|AAK84627.1| 927|Caenorhabditis elegans Dipeptidyl pe... 26 9.2
AF022977-3|AAB88609.1| 554|Caenorhabditis elegans Hypothetical ... 26 9.2
AF003142-5|ABQ13067.1| 474|Caenorhabditis elegans Hypothetical ... 26 9.2
AF003142-4|AAK73888.1| 856|Caenorhabditis elegans Hypothetical ... 26 9.2
AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like ... 26 9.2
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 162 bits (393), Expect = 1e-40
Identities = 71/89 (79%), Positives = 79/89 (88%)
Frame = +2
Query: 119 FQAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDA 298
F AQVI++NHPGQISNGYTPVLDCHTAHIACKF E+KEKVDRRTGK ED PK +KSGDA
Sbjct: 306 FHAQVIIMNHPGQISNGYTPVLDCHTAHIACKFNELKEKVDRRTGKKVEDFPKFLKSGDA 365
Query: 299 AIVNLVPSKPLCVESFQEFPPLGRFAVRD 385
IV L+P+KPLCVESF ++ PLGRFAVRD
Sbjct: 366 GIVELIPTKPLCVESFTDYAPLGRFAVRD 394
Score = 48.4 bits (110), Expect = 2e-06
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = +1
Query: 7 GDNVGFNVKNVSVKELRRGYVAGDSKNTTRTE 102
GDNVGFNVKNVSVK++RRG V DSK E
Sbjct: 271 GDNVGFNVKNVSVKDIRRGSVCSDSKQDPAKE 302
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 162 bits (393), Expect = 1e-40
Identities = 71/89 (79%), Positives = 79/89 (88%)
Frame = +2
Query: 119 FQAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDA 298
F AQVI++NHPGQISNGYTPVLDCHTAHIACKF E+KEKVDRRTGK ED PK +KSGDA
Sbjct: 340 FHAQVIIMNHPGQISNGYTPVLDCHTAHIACKFNELKEKVDRRTGKKVEDFPKFLKSGDA 399
Query: 299 AIVNLVPSKPLCVESFQEFPPLGRFAVRD 385
IV L+P+KPLCVESF ++ PLGRFAVRD
Sbjct: 400 GIVELIPTKPLCVESFTDYAPLGRFAVRD 428
Score = 48.4 bits (110), Expect = 2e-06
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = +1
Query: 7 GDNVGFNVKNVSVKELRRGYVAGDSKNTTRTE 102
GDNVGFNVKNVSVK++RRG V DSK E
Sbjct: 305 GDNVGFNVKNVSVKDIRRGSVCSDSKQDPAKE 336
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 162 bits (393), Expect = 1e-40
Identities = 71/89 (79%), Positives = 79/89 (88%)
Frame = +2
Query: 119 FQAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDA 298
F AQVI++NHPGQISNGYTPVLDCHTAHIACKF E+KEKVDRRTGK ED PK +KSGDA
Sbjct: 340 FHAQVIIMNHPGQISNGYTPVLDCHTAHIACKFNELKEKVDRRTGKKVEDFPKFLKSGDA 399
Query: 299 AIVNLVPSKPLCVESFQEFPPLGRFAVRD 385
IV L+P+KPLCVESF ++ PLGRFAVRD
Sbjct: 400 GIVELIPTKPLCVESFTDYAPLGRFAVRD 428
Score = 48.4 bits (110), Expect = 2e-06
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = +1
Query: 7 GDNVGFNVKNVSVKELRRGYVAGDSKNTTRTE 102
GDNVGFNVKNVSVK++RRG V DSK E
Sbjct: 305 GDNVGFNVKNVSVKDIRRGSVCSDSKQDPAKE 336
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 59.3 bits (137), Expect = 1e-09
Identities = 33/100 (33%), Positives = 54/100 (54%)
Frame = +2
Query: 86 TPPGLNFTCSHFQAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTE 265
+P L T F A+V+VL H I++GY+ VL +A + +D++TG+ +
Sbjct: 420 SPDSLAKTGRVFDAEVLVLEHRSIIASGYSCVLHIQSAVEEVTVKGVIATIDKKTGE--K 477
Query: 266 DNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRD 385
K +K + I+ L +P +E F+E+P LGRF +RD
Sbjct: 478 KRAKFVKQDEKCIMRLESPEPFVLEPFKEYPYLGRFTLRD 517
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 38.7 bits (86), Expect = 0.002
Identities = 19/88 (21%), Positives = 38/88 (43%)
Frame = +2
Query: 119 FQAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDA 298
F+ +++ I G L H+ + C F + +++ G+ + P+ I G +
Sbjct: 487 FEVRLVAFEIAMPIIKGAKAELYAHSLCVPCTFTNLLYTINKSNGEILKKGPRFIAKGAS 546
Query: 299 AIVNLVPSKPLCVESFQEFPPLGRFAVR 382
A+V + + +E+F LGR R
Sbjct: 547 AVVEIETEYDIAIETFTSCRALGRVTFR 574
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 38.7 bits (86), Expect = 0.002
Identities = 19/88 (21%), Positives = 38/88 (43%)
Frame = +2
Query: 119 FQAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDA 298
F+ +++ I G L H+ + C F + +++ G+ + P+ I G +
Sbjct: 505 FEVRLVAFEIAMPIIKGAKAELYAHSLCVPCTFTNLLYTINKSNGEILKKGPRFIAKGAS 564
Query: 299 AIVNLVPSKPLCVESFQEFPPLGRFAVR 382
A+V + + +E+F LGR R
Sbjct: 565 AVVEIETEYDIAIETFTSCRALGRVTFR 592
>U88170-4|AAB42245.2| 425|Caenorhabditis elegans Hypothetical
protein C10G11.6 protein.
Length = 425
Score = 29.9 bits (64), Expect = 0.75
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +1
Query: 184 GLPHSPHSLQICRNQRESRPSYW*INR 264
GL HSPHS N R S P ++ INR
Sbjct: 47 GLVHSPHSSFTTENLRSSDPMFFDINR 73
>Z81476-10|CAN86579.1| 224|Caenorhabditis elegans Hypothetical
protein C25F9.13 protein.
Length = 224
Score = 29.5 bits (63), Expect = 0.99
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +3
Query: 243 VVLVNQQRTTLNPLNLVMPPLSTWFPPSPCVWSPSRNSHP 362
++L++ T L L + P + W PPS C P+ ++ P
Sbjct: 149 LILISSLITCFLNLKLSIVPSTKWRPPSSCTMYPANSTFP 188
>Z81476-1|CAB03921.2| 431|Caenorhabditis elegans Hypothetical
protein C25F9.1 protein.
Length = 431
Score = 29.5 bits (63), Expect = 0.99
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +3
Query: 243 VVLVNQQRTTLNPLNLVMPPLSTWFPPSPCVWSPSRNSHP 362
++L++ T L L + P + W PPS C P+ ++ P
Sbjct: 149 LILISSLITCFFNLKLEIVPSTKWRPPSSCTMYPANSTFP 188
>AC006816-6|ABA00154.1| 506|Caenorhabditis elegans Hypothetical
protein Y71D11A.1 protein.
Length = 506
Score = 29.5 bits (63), Expect = 0.99
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +3
Query: 216 LPKSKRKSTVVLVNQQRTTLNPLNLVMPPLSTWFPPSPCVWS 341
LPK+ T V + TT+ P +PP +T PP +S
Sbjct: 264 LPKTTVAPTTTTVPRTTTTVPPTTTTVPPTTTTVPPITTTYS 305
>Z73971-4|CAA98254.1| 205|Caenorhabditis elegans Hypothetical
protein C50H2.6 protein.
Length = 205
Score = 28.3 bits (60), Expect = 2.3
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Frame = +2
Query: 47 RNCAVVTLQEIRKTPPGLNFTCSHFQA--QVIVLNHPGQISNGYTPVLDCHTAHIACK 214
RNC V + EI+ N TC + + + GQ+ Y +L H + IA K
Sbjct: 142 RNCGVFSKAEIQTLAEKYNMTCKQIKQYFRNLRFRSKGQLKTEYFFILFIHFSQIAIK 199
>U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform b protein.
Length = 564
Score = 28.3 bits (60), Expect = 2.3
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 182 LDCHTAHIACKFAEIKEKVDRRTGKSTE 265
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform a protein.
Length = 690
Score = 28.3 bits (60), Expect = 2.3
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 182 LDCHTAHIACKFAEIKEKVDRRTGKSTE 265
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>U29515-1|AAC06328.1| 449|Caenorhabditis elegans fem-2 protein.
Length = 449
Score = 28.3 bits (60), Expect = 2.3
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +1
Query: 7 GDNVGFNVKNVSVKELRRGYVAGDSKNTTRTE 102
GD+ G+ + N+ ++L RG+ D + R E
Sbjct: 282 GDSPGYVMSNIEFRQLTRGHSPSDEREARRVE 313
>U28412-8|AAC46598.1| 449|Caenorhabditis elegans Feminization of xx
and xo animalsprotein 2 protein.
Length = 449
Score = 28.3 bits (60), Expect = 2.3
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +1
Query: 7 GDNVGFNVKNVSVKELRRGYVAGDSKNTTRTE 102
GD+ G+ + N+ ++L RG+ D + R E
Sbjct: 282 GDSPGYVMSNIEFRQLTRGHSPSDEREARRVE 313
>AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like
protein protein.
Length = 690
Score = 28.3 bits (60), Expect = 2.3
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 182 LDCHTAHIACKFAEIKEKVDRRTGKSTE 265
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 27.1 bits (57), Expect = 5.3
Identities = 24/78 (30%), Positives = 30/78 (38%)
Frame = +3
Query: 165 TDTHLYWIATQPT*PANLPKSKRKSTVVLVNQQRTTLNPLNLVMPPLSTWFPPSPCVWSP 344
T T + I T PT PANL T VN +T P V P T P P V +
Sbjct: 508 TPTTVGTIGTSPTAPANL----TTPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTT 563
Query: 345 SRNSHPSVVSPCVTMRQT 398
+ + S + T T
Sbjct: 564 TPTTTTSTTTTTTTTTTT 581
>AC024826-6|AAF60801.1| 379|Caenorhabditis elegans Hypothetical
protein Y55F3AM.9 protein.
Length = 379
Score = 27.1 bits (57), Expect = 5.3
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +2
Query: 218 AEIKEKVDRRTGKSTEDNPKS 280
AEI + +D+ GKSTE++P++
Sbjct: 27 AEILQSLDKSLGKSTEESPEA 47
>Z83117-6|CAN86902.1| 1931|Caenorhabditis elegans Hypothetical
protein T01H8.5d protein.
Length = 1931
Score = 26.6 bits (56), Expect = 7.0
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 24 QRQKRICQGIAPW-LRCRRFEKHHQD*TSP 110
QR K +C GIAPW L +R + QD T P
Sbjct: 380 QRNKIVCIGIAPWGLLKKREDFIGQDKTVP 409
>Z83117-5|CAN86901.1| 1971|Caenorhabditis elegans Hypothetical
protein T01H8.5c protein.
Length = 1971
Score = 26.6 bits (56), Expect = 7.0
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 24 QRQKRICQGIAPW-LRCRRFEKHHQD*TSP 110
QR K +C GIAPW L +R + QD T P
Sbjct: 420 QRNKIVCIGIAPWGLLKKREDFIGQDKTVP 449
>Z83117-4|CAB05572.2| 2032|Caenorhabditis elegans Hypothetical
protein T01H8.5a protein.
Length = 2032
Score = 26.6 bits (56), Expect = 7.0
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 24 QRQKRICQGIAPW-LRCRRFEKHHQD*TSP 110
QR K +C GIAPW L +R + QD T P
Sbjct: 481 QRNKIVCIGIAPWGLLKKREDFIGQDKTVP 510
>Z80219-10|CAN86596.1| 1931|Caenorhabditis elegans Hypothetical
protein T01H8.5d protein.
Length = 1931
Score = 26.6 bits (56), Expect = 7.0
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 24 QRQKRICQGIAPW-LRCRRFEKHHQD*TSP 110
QR K +C GIAPW L +R + QD T P
Sbjct: 380 QRNKIVCIGIAPWGLLKKREDFIGQDKTVP 409
>Z80219-9|CAN86595.1| 1971|Caenorhabditis elegans Hypothetical
protein T01H8.5c protein.
Length = 1971
Score = 26.6 bits (56), Expect = 7.0
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 24 QRQKRICQGIAPW-LRCRRFEKHHQD*TSP 110
QR K +C GIAPW L +R + QD T P
Sbjct: 420 QRNKIVCIGIAPWGLLKKREDFIGQDKTVP 449
>Z80219-8|CAB02303.2| 2032|Caenorhabditis elegans Hypothetical
protein T01H8.5a protein.
Length = 2032
Score = 26.6 bits (56), Expect = 7.0
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 24 QRQKRICQGIAPW-LRCRRFEKHHQD*TSP 110
QR K +C GIAPW L +R + QD T P
Sbjct: 481 QRNKIVCIGIAPWGLLKKREDFIGQDKTVP 510
>Z49068-4|CAC42319.1| 705|Caenorhabditis elegans Hypothetical
protein K01C8.3b protein.
Length = 705
Score = 26.6 bits (56), Expect = 7.0
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +3
Query: 288 LVMPPLSTWFPPSPCVWSPSRNSHPSVVS 374
L+MP ++ W P + P+ NS PS+++
Sbjct: 139 LIMPGITHWQHPRFHAYFPAGNSFPSIIA 167
>Z49068-3|CAA88862.1| 650|Caenorhabditis elegans Hypothetical
protein K01C8.3a protein.
Length = 650
Score = 26.6 bits (56), Expect = 7.0
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +3
Query: 288 LVMPPLSTWFPPSPCVWSPSRNSHPSVVS 374
L+MP ++ W P + P+ NS PS+++
Sbjct: 139 LIMPGITHWQHPRFHAYFPAGNSFPSIIA 167
>AJ276020-1|CAC81668.1| 1971|Caenorhabditis elegans putative TRP
homologous cationchannel protein.
Length = 1971
Score = 26.6 bits (56), Expect = 7.0
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 24 QRQKRICQGIAPW-LRCRRFEKHHQD*TSP 110
QR K +C GIAPW L +R + QD T P
Sbjct: 420 QRNKIVCIGIAPWGLLKKREDFIGQDKTVP 449
>Z99277-6|CAB16484.1| 677|Caenorhabditis elegans Hypothetical
protein Y53C12A.1 protein.
Length = 677
Score = 26.2 bits (55), Expect = 9.2
Identities = 12/49 (24%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +3
Query: 234 KSTVVLVNQQRTTLNP-LNLVMPPLSTWFPPSPCVWSPSRNSHPSVVSP 377
+ T + ++R + P P + PP+ +WS + S P +V+P
Sbjct: 36 RETPLSTKRERQAITPRFRRPAPKMIKTMPPTRSIWSVRKESVPLLVTP 84
>U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like
protein protein 18 protein.
Length = 932
Score = 26.2 bits (55), Expect = 9.2
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +2
Query: 182 LDCHTAHIACKFAEIKEKVDRRTGKSTE 265
L C ++C+ + +K+K + T KS E
Sbjct: 527 LQCQNEKLSCELSSLKDKHEEATSKSIE 554
>AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like
protein-18 protein.
Length = 932
Score = 26.2 bits (55), Expect = 9.2
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +2
Query: 182 LDCHTAHIACKFAEIKEKVDRRTGKSTE 265
L C ++C+ + +K+K + T KS E
Sbjct: 527 LQCQNEKLSCELSSLKDKHEEATSKSIE 554
>AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical
protein Y18D10A.1 protein.
Length = 1634
Score = 26.2 bits (55), Expect = 9.2
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 128 QVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKE 232
Q+++LNHP QI +L A C+F ++E
Sbjct: 1375 QILLLNHPNQIGKSTCYILMSDVAKY-CRFLVVEE 1408
>AF043699-7|AAK84627.1| 927|Caenorhabditis elegans Dipeptidyl
peptidase four (iv)family protein 3, isoform b protein.
Length = 927
Score = 26.2 bits (55), Expect = 9.2
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +2
Query: 77 IRKTPPGLNFT--CSHFQAQVIVLNHPGQISNG 169
IRKTPP FT C ++QV+ +I NG
Sbjct: 130 IRKTPPSAEFTLQCERQRSQVVTGISDYEIRNG 162
>AF022977-3|AAB88609.1| 554|Caenorhabditis elegans Hypothetical
protein ZK994.1 protein.
Length = 554
Score = 26.2 bits (55), Expect = 9.2
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -2
Query: 69 NVTTAQFLDRYVFDVETN 16
N TTA FLD Y+F V T+
Sbjct: 384 NSTTATFLDDYIFHVPTS 401
>AF003142-5|ABQ13067.1| 474|Caenorhabditis elegans Hypothetical
protein F57C9.4c protein.
Length = 474
Score = 26.2 bits (55), Expect = 9.2
Identities = 11/39 (28%), Positives = 15/39 (38%)
Frame = +1
Query: 103 LHLQSLSSASHCAKSPRSNIKRIHTCIGLPHSPHSLQIC 219
LH S+ + HC K R N + H P+ C
Sbjct: 387 LHTNSVFACEHCGKRGRRNFLKTHIRTHTGERPYRCDTC 425
>AF003142-4|AAK73888.1| 856|Caenorhabditis elegans Hypothetical
protein F57C9.4b protein.
Length = 856
Score = 26.2 bits (55), Expect = 9.2
Identities = 11/39 (28%), Positives = 15/39 (38%)
Frame = +1
Query: 103 LHLQSLSSASHCAKSPRSNIKRIHTCIGLPHSPHSLQIC 219
LH S+ + HC K R N + H P+ C
Sbjct: 769 LHTNSVFACEHCGKRGRRNFLKTHIRTHTGERPYRCDTC 807
>AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like
protein KLP-18 protein.
Length = 930
Score = 26.2 bits (55), Expect = 9.2
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +2
Query: 182 LDCHTAHIACKFAEIKEKVDRRTGKSTE 265
L C ++C+ + +K+K + T KS E
Sbjct: 525 LQCQNEKLSCELSSLKDKHEEATSKSIE 552
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,023,692
Number of Sequences: 27780
Number of extensions: 253765
Number of successful extensions: 892
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 891
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 662437636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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