Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_J23
(593 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 23 1.7
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 23 1.7
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 22 3.9
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 22 3.9
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 22 3.9
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 22 3.9
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 22 3.9
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 22 3.9
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 22 3.9
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 22 3.9
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 22 3.9
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 3.9
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 3.9
AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective... 21 6.9
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 21 9.1
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 9.1
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 21 9.1
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 23.4 bits (48), Expect = 1.7
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = -1
Query: 479 PLILASANIPEALQYRGNPISTLNALLYCTRRALYALCV*LTHRLHVYND*QYAVDSVVF 300
P L + N+ A + G+P +T T ++ ALC L H H + A++ + F
Sbjct: 430 PRELEAVNLGSACRIHGSPATTAAPPQLPTEESVDALCNTL-HHWHHCPEIYKAIEGIRF 488
Query: 299 TA 294
A
Sbjct: 489 IA 490
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 23.4 bits (48), Expect = 1.7
Identities = 10/22 (45%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Frame = -1
Query: 470 LASANIPEAL-QYRGNPISTLN 408
+++ + EA+ Q++GNPIS LN
Sbjct: 410 MSTGEMKEAITQWQGNPISPLN 431
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.9
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +1
Query: 358 NYTQRAYNALRVQYNNAFRVLMGLPRYC 441
NY + YN L N ++ + +P YC
Sbjct: 100 NYNKHNYNKLYYNINYIEQIPIPVPVYC 127
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.9
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +1
Query: 358 NYTQRAYNALRVQYNNAFRVLMGLPRYC 441
NY + YN L N ++ + +P YC
Sbjct: 100 NYNKHNYNKLYYNINYIEQIPIPVPVYC 127
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.9
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +1
Query: 358 NYTQRAYNALRVQYNNAFRVLMGLPRYC 441
NY + YN L N ++ + +P YC
Sbjct: 100 NYNKHNYNKLYYNINYIEQIPIPVPVYC 127
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.9
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +1
Query: 358 NYTQRAYNALRVQYNNAFRVLMGLPRYC 441
NY + YN L N ++ + +P YC
Sbjct: 100 NYNKHNYNKLYYNINYIEQIPIPVPVYC 127
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.9
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +1
Query: 358 NYTQRAYNALRVQYNNAFRVLMGLPRYC 441
NY + YN L N ++ + +P YC
Sbjct: 100 NYNKHNYNKLYYNINYIEQIPIPVPVYC 127
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.9
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +1
Query: 358 NYTQRAYNALRVQYNNAFRVLMGLPRYC 441
NY + YN L N ++ + +P YC
Sbjct: 100 NYNKHNYNKLYYNINYIEQIPIPVPVYC 127
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.9
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +1
Query: 358 NYTQRAYNALRVQYNNAFRVLMGLPRYC 441
NY + YN L N ++ + +P YC
Sbjct: 100 NYNKHNYNKLYYNINYIEQIPIPVPVYC 127
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.9
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +1
Query: 358 NYTQRAYNALRVQYNNAFRVLMGLPRYC 441
NY + YN L N ++ + +P YC
Sbjct: 100 NYNKHNYNKLYYNINYIEQIPIPVPVYC 127
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.9
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +1
Query: 358 NYTQRAYNALRVQYNNAFRVLMGLPRYC 441
NY + YN L N ++ + +P YC
Sbjct: 100 NYNKHNYNKLYYNINYIEQIPIPVPVYC 127
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 3.9
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +1
Query: 358 NYTQRAYNALRVQYNNAFRVLMGLPRYC 441
NY + YN L N ++ + +P YC
Sbjct: 333 NYNKHNYNKLYYNINYIEQIPIPVPVYC 360
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 3.9
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +1
Query: 358 NYTQRAYNALRVQYNNAFRVLMGLPRYC 441
NY + YN L N ++ + +P YC
Sbjct: 333 NYNKHNYNKLYYNINYIEQIPIPVPVYC 360
>AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective
protein-1 protein.
Length = 128
Score = 21.4 bits (43), Expect = 6.9
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 384 SACTIQQCIQGADGVAAVLQRF 449
SAC I QC +G D + Q +
Sbjct: 54 SACGIVQCAKGPDELCGGPQNY 75
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 21.0 bits (42), Expect = 9.1
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +1
Query: 376 YNALRVQYNNAFR 414
YN + ++Y NAF+
Sbjct: 328 YNLMSIKYRNAFK 340
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.0 bits (42), Expect = 9.1
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -3
Query: 390 TQSVVCPLRVVDP 352
T+S C LRV+DP
Sbjct: 41 TRSADCTLRVLDP 53
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 21.0 bits (42), Expect = 9.1
Identities = 4/12 (33%), Positives = 9/12 (75%)
Frame = +2
Query: 233 SAERWLFGVICW 268
+++ W G++CW
Sbjct: 818 ASDVWSMGIVCW 829
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,589
Number of Sequences: 438
Number of extensions: 3368
Number of successful extensions: 17
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17359926
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -