Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_J22
         (597 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   3.0  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   3.0  
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    22   5.3  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   6.9  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   6.9  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    21   6.9  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   6.9  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          21   6.9  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    21   9.2  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 90  YKVDLHILKPFSIFCY 43
           Y V+LH   PFSI+ +
Sbjct: 466 YNVELHNSSPFSIYSF 481


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 90  YKVDLHILKPFSIFCY 43
           Y V+LH   PFSI+ +
Sbjct: 504 YNVELHNSSPFSIYSF 519


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 543 CEIQYRDAIFNIT 581
           CE  Y D +FNIT
Sbjct: 219 CEEPYPDIVFNIT 231


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +3

Query: 411 ITLLTNYCNFMGLRDYLLKL 470
           + L+ NY NFM + ++++ L
Sbjct: 529 VDLVHNYMNFMQMDEFVVNL 548


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +3

Query: 411 ITLLTNYCNFMGLRDYLLKL 470
           + L+ NY NFM + ++++ L
Sbjct: 529 VDLVHNYMNFMQMDEFVVNL 548


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 302 YCKSKEGKIYCKKKE 346
           Y   ++GKIY +KKE
Sbjct: 795 YSPVEDGKIYSEKKE 809


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -1

Query: 246 NYNDSYFTNK 217
           NYND+YF +K
Sbjct: 137 NYNDNYFYSK 146


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +3

Query: 411 ITLLTNYCNFMGLRDYLLKL 470
           + L+ NY NFM + ++++ L
Sbjct: 155 VDLVHNYMNFMQMDEFVVNL 174


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 267 INVSFKINYNDSYFTNKI 214
           +NV + IN ND Y  N I
Sbjct: 79  LNVLYFINKNDKYEENTI 96


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,766
Number of Sequences: 438
Number of extensions: 1814
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)