Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_J18
         (605 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    31   0.012
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           31   0.012
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    24   1.0  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    23   1.8  
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    22   4.1  
AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family p...    22   4.1  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    21   7.1  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    21   7.1  

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 30.7 bits (66), Expect = 0.012
 Identities = 26/103 (25%), Positives = 40/103 (38%), Gaps = 1/103 (0%)
 Frame = +2

Query: 80  FAPKLDETDKKLPLIVWPHGGPHFNFVNVFSLETAFFNMLGMASLQINYR-GSTGVGDAS 256
           + P      + LP+I W HGG  F F +   +   +     +  + INYR G  G     
Sbjct: 111 YVPADRTPSQSLPVIFWIHGGA-FQFGSGIPMGAKYLMDSDVIFVTINYRLGILGFLSTE 169

Query: 257 VRFLPKRVGDADVKDCKLATDVALQKFKVDAGRLCLFGGSHGG 385
              +P  +G  D           ++ F  +  R+ L G S GG
Sbjct: 170 DEVVPGNMGLKDQSMALRWVSENIEWFGGNPKRITLIGLSAGG 212


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 30.7 bits (66), Expect = 0.012
 Identities = 26/103 (25%), Positives = 40/103 (38%), Gaps = 1/103 (0%)
 Frame = +2

Query: 80  FAPKLDETDKKLPLIVWPHGGPHFNFVNVFSLETAFFNMLGMASLQINYR-GSTGVGDAS 256
           + P      + LP+I W HGG  F F +   +   +     +  + INYR G  G     
Sbjct: 111 YVPADRTPSQSLPVIFWIHGGA-FQFGSGIPMGAKYLMDSDVIFVTINYRLGILGFLSTE 169

Query: 257 VRFLPKRVGDADVKDCKLATDVALQKFKVDAGRLCLFGGSHGG 385
              +P  +G  D           ++ F  +  R+ L G S GG
Sbjct: 170 DEVVPGNMGLKDQSMALRWVSENIEWFGGNPKRITLIGLSAGG 212


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 399 CVTRKPPCDPPNKHSLPAST 340
           CVT    CD P+  + P+ST
Sbjct: 261 CVTNSVTCDRPSDEAEPSST 280


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = -3

Query: 522 WKPASAAHQSGMSVELNILATSITGFRLTTAL*TSG 415
           WK   AA ++G  V  ++    I GF +   +  +G
Sbjct: 225 WKILKAAEEAGFGVSEDLSGDRINGFTVAQTISRNG 260


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 568 HGQQLFLRQCTGL 530
           HGQ++ +R C GL
Sbjct: 384 HGQRVMVRTCNGL 396


>AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family
           protein protein.
          Length = 166

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 135 TGDRTSTSSTFSPWKLH 185
           TG+R   SS F P K+H
Sbjct: 144 TGERCRISSNFLPNKMH 160


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +2

Query: 113 LPLIVWPHGG 142
           LPL+VW +GG
Sbjct: 158 LPLLVWIYGG 167


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +2

Query: 113 LPLIVWPHGG 142
           LPL+VW +GG
Sbjct: 158 LPLLVWIYGG 167


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,136
Number of Sequences: 438
Number of extensions: 4361
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17848938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)