Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_J17
(591 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L05093-1|AAC18781.1| 176|Homo sapiens ribosomal protein L18a pr... 240 2e-63
BC071920-1|AAH71920.1| 176|Homo sapiens ribosomal protein L18a ... 240 2e-63
BC066319-1|AAH66319.1| 176|Homo sapiens ribosomal protein L18a ... 240 2e-63
BC007512-1|AAH07512.1| 176|Homo sapiens ribosomal protein L18a ... 240 2e-63
AK222647-1|BAD96367.1| 176|Homo sapiens ribosomal protein L18a ... 240 2e-63
AC005796-1|AAC62828.1| 176|Homo sapiens ribosomal protein L18a ... 240 2e-63
AY779046-1|AAX47571.1| 136|Homo sapiens ribosomal protein L18a-... 185 9e-47
X80822-1|CAA56788.1| 140|Homo sapiens protein ( H.sapiens mRNA ... 171 1e-42
AB007175-1|BAA28596.1| 66|Homo sapiens ribosomal protein L18a ... 95 2e-19
X04393-1|CAA27981.1| 545|Homo sapiens complement C8-beta propet... 29 9.3
M16973-1|AAA51862.1| 591|Homo sapiens C8B protein. 29 9.3
BC130575-1|AAI30576.1| 591|Homo sapiens complement component 8,... 29 9.3
BC020701-1|AAH20701.1| 389|Homo sapiens Unknown (protein for IM... 29 9.3
AL121998-1|CAC18532.1| 591|Homo sapiens complement component 8,... 29 9.3
>L05093-1|AAC18781.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 240 bits (588), Expect = 2e-63
Identities = 115/179 (64%), Positives = 141/179 (78%), Gaps = 1/179 (0%)
Frame = +2
Query: 14 MKAKGELKEYEVIGRKLPSESEPSSSI-QMRIEEIFSPDPIVAKSRFWYFLRQLKKFKKT 190
MKA G L+EY+V+GR LP+ + + +MRI F+P+ +VAKSRFWYF+ QLKK KK+
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRI---FAPNHVVAKSRFWYFVSQLKKMKKS 57
Query: 191 TGEIVSIKEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARH 370
+GEIV ++ EKSP+++KNFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARH
Sbjct: 58 SGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARH 117
Query: 371 RARAHSIQIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPSTYF 547
RARAHSIQI+KVE I A+ CRRP VKQFH SKI FPLP RV + + F KRP+T+F
Sbjct: 118 RARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>BC071920-1|AAH71920.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 240 bits (588), Expect = 2e-63
Identities = 115/179 (64%), Positives = 141/179 (78%), Gaps = 1/179 (0%)
Frame = +2
Query: 14 MKAKGELKEYEVIGRKLPSESEPSSSI-QMRIEEIFSPDPIVAKSRFWYFLRQLKKFKKT 190
MKA G L+EY+V+GR LP+ + + +MRI F+P+ +VAKSRFWYF+ QLKK KK+
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRI---FAPNHVVAKSRFWYFVSQLKKMKKS 57
Query: 191 TGEIVSIKEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARH 370
+GEIV ++ EKSP+++KNFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARH
Sbjct: 58 SGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARH 117
Query: 371 RARAHSIQIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPSTYF 547
RARAHSIQI+KVE I A+ CRRP VKQFH SKI FPLP RV + + F KRP+T+F
Sbjct: 118 RARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>BC066319-1|AAH66319.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 240 bits (588), Expect = 2e-63
Identities = 115/179 (64%), Positives = 141/179 (78%), Gaps = 1/179 (0%)
Frame = +2
Query: 14 MKAKGELKEYEVIGRKLPSESEPSSSI-QMRIEEIFSPDPIVAKSRFWYFLRQLKKFKKT 190
MKA G L+EY+V+GR LP+ + + +MRI F+P+ +VAKSRFWYF+ QLKK KK+
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRI---FAPNHVVAKSRFWYFVSQLKKMKKS 57
Query: 191 TGEIVSIKEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARH 370
+GEIV ++ EKSP+++KNFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARH
Sbjct: 58 SGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARH 117
Query: 371 RARAHSIQIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPSTYF 547
RARAHSIQI+KVE I A+ CRRP VKQFH SKI FPLP RV + + F KRP+T+F
Sbjct: 118 RARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>BC007512-1|AAH07512.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 240 bits (588), Expect = 2e-63
Identities = 115/179 (64%), Positives = 141/179 (78%), Gaps = 1/179 (0%)
Frame = +2
Query: 14 MKAKGELKEYEVIGRKLPSESEPSSSI-QMRIEEIFSPDPIVAKSRFWYFLRQLKKFKKT 190
MKA G L+EY+V+GR LP+ + + +MRI F+P+ +VAKSRFWYF+ QLKK KK+
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRI---FAPNHVVAKSRFWYFVSQLKKMKKS 57
Query: 191 TGEIVSIKEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARH 370
+GEIV ++ EKSP+++KNFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARH
Sbjct: 58 SGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARH 117
Query: 371 RARAHSIQIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPSTYF 547
RARAHSIQI+KVE I A+ CRRP VKQFH SKI FPLP RV + + F KRP+T+F
Sbjct: 118 RARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>AK222647-1|BAD96367.1| 176|Homo sapiens ribosomal protein L18a
variant protein.
Length = 176
Score = 240 bits (588), Expect = 2e-63
Identities = 115/179 (64%), Positives = 141/179 (78%), Gaps = 1/179 (0%)
Frame = +2
Query: 14 MKAKGELKEYEVIGRKLPSESEPSSSI-QMRIEEIFSPDPIVAKSRFWYFLRQLKKFKKT 190
MKA G L+EY+V+GR LP+ + + +MRI F+P+ +VAKSRFWYF+ QLKK KK+
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRI---FAPNHVVAKSRFWYFVSQLKKMKKS 57
Query: 191 TGEIVSIKEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARH 370
+GEIV ++ EKSP+++KNFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARH
Sbjct: 58 SGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTAAGAVTQCYRDMGARH 117
Query: 371 RARAHSIQIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPSTYF 547
RARAHSIQI+KVE I A+ CRRP VKQFH SKI FPLP RV + + F KRP+T+F
Sbjct: 118 RARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>AC005796-1|AAC62828.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 240 bits (588), Expect = 2e-63
Identities = 115/179 (64%), Positives = 141/179 (78%), Gaps = 1/179 (0%)
Frame = +2
Query: 14 MKAKGELKEYEVIGRKLPSESEPSSSI-QMRIEEIFSPDPIVAKSRFWYFLRQLKKFKKT 190
MKA G L+EY+V+GR LP+ + + +MRI F+P+ +VAKSRFWYF+ QLKK KK+
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRI---FAPNHVVAKSRFWYFVSQLKKMKKS 57
Query: 191 TGEIVSIKEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARH 370
+GEIV ++ EKSP+++KNFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARH
Sbjct: 58 SGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARH 117
Query: 371 RARAHSIQIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPSTYF 547
RARAHSIQI+KVE I A+ CRRP VKQFH SKI FPLP RV + + F KRP+T+F
Sbjct: 118 RARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>AY779046-1|AAX47571.1| 136|Homo sapiens ribosomal protein
L18a-like protein protein.
Length = 136
Score = 185 bits (451), Expect = 9e-47
Identities = 88/138 (63%), Positives = 111/138 (80%), Gaps = 1/138 (0%)
Frame = +2
Query: 14 MKAKGELKEYEVIGRKLPSESEPSSSI-QMRIEEIFSPDPIVAKSRFWYFLRQLKKFKKT 190
MKA G L+EY+V+GR+LP+ + + +MRI F+P+ +VAKSRFWYF+ QLKK KK+
Sbjct: 1 MKASGTLREYKVVGRRLPTPKCHTPPLYRMRI---FAPNHVVAKSRFWYFVSQLKKMKKS 57
Query: 191 TGEIVSIKEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARH 370
+GE V ++ EKSP+++KNFGIWLR +SRSG HNMYREYRDL+ GAVTQCYRDMGARH
Sbjct: 58 SGETVYCGQVFEKSPLRVKNFGIWLRCDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARH 117
Query: 371 RARAHSIQIIKVEVIKAA 424
RARAHSIQI+ VE I A+
Sbjct: 118 RARAHSIQIMMVEEIAAS 135
>X80822-1|CAA56788.1| 140|Homo sapiens protein ( H.sapiens mRNA for
ORF. ).
Length = 140
Score = 171 bits (417), Expect = 1e-42
Identities = 77/111 (69%), Positives = 90/111 (81%)
Frame = +2
Query: 215 EIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQ 394
++ EKSP+++KNFGIWL Y+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQ
Sbjct: 30 QVFEKSPLRVKNFGIWLSYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQ 89
Query: 395 IIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPSTYF 547
I+KVE I + CRRP VKQFH SKI FPLP RV + + F KRP+T+F
Sbjct: 90 IMKVEEIAVSKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 140
>AB007175-1|BAA28596.1| 66|Homo sapiens ribosomal protein L18a
protein.
Length = 66
Score = 94.7 bits (225), Expect = 2e-19
Identities = 45/66 (68%), Positives = 51/66 (77%)
Frame = +2
Query: 350 RDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYK 529
RDMGARHRARAHSIQI+KVE I A+ CRRP VKQFH SKI FPLP RV + + F K
Sbjct: 1 RDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTK 60
Query: 530 RPSTYF 547
RP+T+F
Sbjct: 61 RPNTFF 66
>X04393-1|CAA27981.1| 545|Homo sapiens complement C8-beta propetide
/map='1p36.2- p22.1'on) protein.
Length = 545
Score = 29.5 bits (63), Expect = 9.3
Identities = 29/106 (27%), Positives = 44/106 (41%), Gaps = 10/106 (9%)
Frame = +2
Query: 32 LKEYEVIG---RKLPSE--SEPSSSIQMRIEEIFSPDPIVAKSRFWYFLRQLKKFKKTTG 196
LKEYE R + + S+ S +I IF R +++R+ K+F T
Sbjct: 185 LKEYESYSDFERNVTEKMASKSGFSFGFKIPGIFELGISSQSDRGKHYIRRTKRFSHTKS 244
Query: 197 EIVSIKEIPEKSPVKIKNFGIWLRYE-----SRSGVHNMYREYRDL 319
+ + E + K+K + L YE R + Y EYRDL
Sbjct: 245 VFLHARSDLEVAHYKLKPRSLMLHYEFLQRVKRLPLEYSYGEYRDL 290
>M16973-1|AAA51862.1| 591|Homo sapiens C8B protein.
Length = 591
Score = 29.5 bits (63), Expect = 9.3
Identities = 29/106 (27%), Positives = 44/106 (41%), Gaps = 10/106 (9%)
Frame = +2
Query: 32 LKEYEVIG---RKLPSE--SEPSSSIQMRIEEIFSPDPIVAKSRFWYFLRQLKKFKKTTG 196
LKEYE R + + S+ S +I IF R +++R+ K+F T
Sbjct: 231 LKEYESYSDFERNVTEKMASKSGFSFGFKIPGIFELGISSQSDRGKHYIRRTKRFSHTKS 290
Query: 197 EIVSIKEIPEKSPVKIKNFGIWLRYE-----SRSGVHNMYREYRDL 319
+ + E + K+K + L YE R + Y EYRDL
Sbjct: 291 VFLHARSDLEVAHYKLKPRSLMLHYEFLQRVKRLPLEYSYGEYRDL 336
>BC130575-1|AAI30576.1| 591|Homo sapiens complement component 8,
beta polypeptide protein.
Length = 591
Score = 29.5 bits (63), Expect = 9.3
Identities = 29/106 (27%), Positives = 44/106 (41%), Gaps = 10/106 (9%)
Frame = +2
Query: 32 LKEYEVIG---RKLPSE--SEPSSSIQMRIEEIFSPDPIVAKSRFWYFLRQLKKFKKTTG 196
LKEYE R + + S+ S +I IF R +++R+ K+F T
Sbjct: 231 LKEYESYSDFERNVTEKMASKSGFSFGFKIPGIFELGISSQSDRGKHYIRRTKRFSHTKS 290
Query: 197 EIVSIKEIPEKSPVKIKNFGIWLRYE-----SRSGVHNMYREYRDL 319
+ + E + K+K + L YE R + Y EYRDL
Sbjct: 291 VFLHARSDLEVAHYKLKPRSLMLHYEFLQRVKRLPLEYSYGEYRDL 336
>BC020701-1|AAH20701.1| 389|Homo sapiens Unknown (protein for
IMAGE:4723666) protein.
Length = 389
Score = 29.5 bits (63), Expect = 9.3
Identities = 29/106 (27%), Positives = 44/106 (41%), Gaps = 10/106 (9%)
Frame = +2
Query: 32 LKEYEVIG---RKLPSE--SEPSSSIQMRIEEIFSPDPIVAKSRFWYFLRQLKKFKKTTG 196
LKEYE R + + S+ S +I IF R +++R+ K+F T
Sbjct: 231 LKEYESYSDFERNVTEKMASKSGFSFGFKIPGIFELGISSQSDRGKHYIRRTKRFSHTKS 290
Query: 197 EIVSIKEIPEKSPVKIKNFGIWLRYE-----SRSGVHNMYREYRDL 319
+ + E + K+K + L YE R + Y EYRDL
Sbjct: 291 VFLHARSDLEVAHYKLKPRSLMLHYEFLQRVKRLPLEYSYGEYRDL 336
>AL121998-1|CAC18532.1| 591|Homo sapiens complement component 8,
beta polypeptide protein.
Length = 591
Score = 29.5 bits (63), Expect = 9.3
Identities = 29/106 (27%), Positives = 44/106 (41%), Gaps = 10/106 (9%)
Frame = +2
Query: 32 LKEYEVIG---RKLPSE--SEPSSSIQMRIEEIFSPDPIVAKSRFWYFLRQLKKFKKTTG 196
LKEYE R + + S+ S +I IF R +++R+ K+F T
Sbjct: 231 LKEYESYSDFERNVTEKMASKSGFSFGFKIPGIFELGISSQSDRGKHYIRRTKRFSHTKS 290
Query: 197 EIVSIKEIPEKSPVKIKNFGIWLRYE-----SRSGVHNMYREYRDL 319
+ + E + K+K + L YE R + Y EYRDL
Sbjct: 291 VFLHARSDLEVAHYKLKPRSLMLHYEFLQRVKRLPLEYSYGEYRDL 336
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,586,083
Number of Sequences: 237096
Number of extensions: 1814354
Number of successful extensions: 4215
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4207
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6211568660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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