Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_J16
(397 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal prot... 138 2e-33
AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p pro... 138 2e-33
AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,... 138 2e-33
AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,... 138 2e-33
AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,... 138 2e-33
AY122076-1|AAM52588.1| 921|Drosophila melanogaster AT18175p pro... 31 0.42
AE014297-3108|AAF55959.3| 1364|Drosophila melanogaster CG5732-PA... 31 0.42
AY119087-1|AAM50947.1| 704|Drosophila melanogaster LP11564p pro... 28 5.2
AE014134-1105|AAF52394.3| 704|Drosophila melanogaster CG31638-P... 28 5.2
AY118621-1|AAM49990.1| 1168|Drosophila melanogaster RE03558p pro... 27 9.0
AE014296-813|AAF47875.2| 1168|Drosophila melanogaster CG1273-PB ... 27 9.0
>X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal protein
L7a protein.
Length = 271
Score = 138 bits (335), Expect = 2e-33
Identities = 62/84 (73%), Positives = 77/84 (91%)
Frame = +1
Query: 82 IVKGKSRLGALVHRKTCTSVALTNVESGDRAAFSKVVEAIKTNFNERYEELRRHWGGGVL 261
IVKGK+RLG LV RKTCT++ALT V++ D+A F KV+EA+KTNFNER+EE+RRHWGGG+L
Sbjct: 188 IVKGKARLGRLVRRKTCTTLALTTVDNNDKANFGKVLEAVKTNFNERHEEIRRHWGGGIL 247
Query: 262 GNKSNARIAKLEKAKAREIAQKQG 333
G+KS ARI+KLE+AKARE+AQKQG
Sbjct: 248 GSKSLARISKLERAKARELAQKQG 271
>AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p
protein.
Length = 271
Score = 138 bits (335), Expect = 2e-33
Identities = 62/84 (73%), Positives = 77/84 (91%)
Frame = +1
Query: 82 IVKGKSRLGALVHRKTCTSVALTNVESGDRAAFSKVVEAIKTNFNERYEELRRHWGGGVL 261
IVKGK+RLG LV RKTCT++ALT V++ D+A F KV+EA+KTNFNER+EE+RRHWGGG+L
Sbjct: 188 IVKGKARLGRLVRRKTCTTLALTTVDNNDKANFGKVLEAVKTNFNERHEEIRRHWGGGIL 247
Query: 262 GNKSNARIAKLEKAKAREIAQKQG 333
G+KS ARI+KLE+AKARE+AQKQG
Sbjct: 248 GSKSLARISKLERAKARELAQKQG 271
>AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,
isoform D protein.
Length = 271
Score = 138 bits (335), Expect = 2e-33
Identities = 62/84 (73%), Positives = 77/84 (91%)
Frame = +1
Query: 82 IVKGKSRLGALVHRKTCTSVALTNVESGDRAAFSKVVEAIKTNFNERYEELRRHWGGGVL 261
IVKGK+RLG LV RKTCT++ALT V++ D+A F KV+EA+KTNFNER+EE+RRHWGGG+L
Sbjct: 188 IVKGKARLGRLVRRKTCTTLALTTVDNNDKANFGKVLEAVKTNFNERHEEIRRHWGGGIL 247
Query: 262 GNKSNARIAKLEKAKAREIAQKQG 333
G+KS ARI+KLE+AKARE+AQKQG
Sbjct: 248 GSKSLARISKLERAKARELAQKQG 271
>AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,
isoform C protein.
Length = 271
Score = 138 bits (335), Expect = 2e-33
Identities = 62/84 (73%), Positives = 77/84 (91%)
Frame = +1
Query: 82 IVKGKSRLGALVHRKTCTSVALTNVESGDRAAFSKVVEAIKTNFNERYEELRRHWGGGVL 261
IVKGK+RLG LV RKTCT++ALT V++ D+A F KV+EA+KTNFNER+EE+RRHWGGG+L
Sbjct: 188 IVKGKARLGRLVRRKTCTTLALTTVDNNDKANFGKVLEAVKTNFNERHEEIRRHWGGGIL 247
Query: 262 GNKSNARIAKLEKAKAREIAQKQG 333
G+KS ARI+KLE+AKARE+AQKQG
Sbjct: 248 GSKSLARISKLERAKARELAQKQG 271
>AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,
isoform A protein.
Length = 271
Score = 138 bits (335), Expect = 2e-33
Identities = 62/84 (73%), Positives = 77/84 (91%)
Frame = +1
Query: 82 IVKGKSRLGALVHRKTCTSVALTNVESGDRAAFSKVVEAIKTNFNERYEELRRHWGGGVL 261
IVKGK+RLG LV RKTCT++ALT V++ D+A F KV+EA+KTNFNER+EE+RRHWGGG+L
Sbjct: 188 IVKGKARLGRLVRRKTCTTLALTTVDNNDKANFGKVLEAVKTNFNERHEEIRRHWGGGIL 247
Query: 262 GNKSNARIAKLEKAKAREIAQKQG 333
G+KS ARI+KLE+AKARE+AQKQG
Sbjct: 248 GSKSLARISKLERAKARELAQKQG 271
>AY122076-1|AAM52588.1| 921|Drosophila melanogaster AT18175p
protein.
Length = 921
Score = 31.5 bits (68), Expect = 0.42
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1
Query: 325 SVLSHAPSPSPAWRYARSTCYRGRH 251
+ L +AP S WRY R +RGRH
Sbjct: 327 ATLGNAPQVSSTWRYGRPGTHRGRH 351
>AE014297-3108|AAF55959.3| 1364|Drosophila melanogaster CG5732-PA
protein.
Length = 1364
Score = 31.5 bits (68), Expect = 0.42
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1
Query: 325 SVLSHAPSPSPAWRYARSTCYRGRH 251
+ L +AP S WRY R +RGRH
Sbjct: 327 ATLGNAPQVSSTWRYGRPGTHRGRH 351
>AY119087-1|AAM50947.1| 704|Drosophila melanogaster LP11564p
protein.
Length = 704
Score = 27.9 bits (59), Expect = 5.2
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +1
Query: 118 HRKTCTSVALTNVESGDRAAFSKVVEAIKTNFNERYEELRRHWGGG--VLGNKSNARIAK 291
H K +A TN E G ++ EA +R EEL+R G L + N ++ +
Sbjct: 411 HAKLKKLLAETNTELGHAVRRAEQYEAEVKRLRQRVEELKRELAGAEDELDSAVN-QVRR 469
Query: 292 LEKAKAREIAQKQG 333
L+++ + Q +G
Sbjct: 470 LQRSNDELVGQTEG 483
>AE014134-1105|AAF52394.3| 704|Drosophila melanogaster CG31638-PA
protein.
Length = 704
Score = 27.9 bits (59), Expect = 5.2
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +1
Query: 118 HRKTCTSVALTNVESGDRAAFSKVVEAIKTNFNERYEELRRHWGGG--VLGNKSNARIAK 291
H K +A TN E G ++ EA +R EEL+R G L + N ++ +
Sbjct: 411 HAKLKKLLAETNTELGHAVRRAEQYEAEVKRLRQRVEELKRELAGAEDELDSAVN-QVRR 469
Query: 292 LEKAKAREIAQKQG 333
L+++ + Q +G
Sbjct: 470 LQRSNDELVGQTEG 483
>AY118621-1|AAM49990.1| 1168|Drosophila melanogaster RE03558p
protein.
Length = 1168
Score = 27.1 bits (57), Expect = 9.0
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 214 NERYEELRRHWGGGVLGNKSNARIAKLEKAKARE 315
NER+E H GGGV+ K ++ K E+ +E
Sbjct: 671 NERFE----HLGGGVIAKKPQEKLEKKEQPSKKE 700
>AE014296-813|AAF47875.2| 1168|Drosophila melanogaster CG1273-PB
protein.
Length = 1168
Score = 27.1 bits (57), Expect = 9.0
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 214 NERYEELRRHWGGGVLGNKSNARIAKLEKAKARE 315
NER+E H GGGV+ K ++ K E+ +E
Sbjct: 671 NERFE----HLGGGVIAKKPQEKLEKKEQPSKKE 700
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,052,850
Number of Sequences: 53049
Number of extensions: 359387
Number of successful extensions: 1013
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1013
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1128794130
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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