Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_J09
(334 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylati... 100 3e-22
AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylat... 96 6e-21
AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylat... 96 6e-21
AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical ... 86 7e-18
Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical pr... 74 2e-14
U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylatio... 68 1e-12
Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical p... 54 3e-08
Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical pr... 50 4e-07
Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical pr... 44 2e-05
Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical pr... 43 6e-05
AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G... 43 6e-05
Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical pr... 39 0.001
AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical ... 35 0.016
Z83117-3|CAB05570.2| 356|Caenorhabditis elegans Hypothetical pr... 34 0.021
AY008137-1|AAG32090.1| 356|Caenorhabditis elegans heterotrimeri... 34 0.021
Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical pr... 33 0.066
Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical pr... 31 0.20
AF016441-6|AAX55687.1| 440|Caenorhabditis elegans Paps (adenosi... 31 0.26
AF016441-4|AAX55686.1| 425|Caenorhabditis elegans Paps (adenosi... 31 0.26
U58748-6|AAB52968.1| 193|Caenorhabditis elegans Hypothetical pr... 30 0.35
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 29 0.81
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 29 0.81
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 29 0.81
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 29 0.81
Z74473-3|CAA98948.1| 364|Caenorhabditis elegans Hypothetical pr... 29 1.1
Z70781-3|CAA94833.2| 352|Caenorhabditis elegans Hypothetical pr... 29 1.1
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 29 1.1
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 29 1.1
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 29 1.1
AY008131-1|AAG32084.1| 364|Caenorhabditis elegans heterotrimeri... 29 1.1
Z72503-4|CAA96595.1| 354|Caenorhabditis elegans Hypothetical pr... 28 1.4
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 28 1.4
U00032-5|AAA50636.2| 1009|Caenorhabditis elegans Yeast isw (imit... 28 1.4
M38251-1|AAA28059.1| 354|Caenorhabditis elegans G-o protein alp... 28 1.4
AY008140-1|AAG32093.1| 354|Caenorhabditis elegans heterotrimeri... 28 1.4
Z80789-3|CAB02553.1| 364|Caenorhabditis elegans Hypothetical pr... 28 1.9
Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical pr... 28 1.9
AY008129-1|AAG32082.1| 364|Caenorhabditis elegans heterotrimeri... 28 1.9
Z19154-5|CAA79557.1| 162|Caenorhabditis elegans Hypothetical pr... 27 3.3
U23171-1|AAC46702.2| 334|Caenorhabditis elegans Serpentine rece... 27 3.3
Z75549-9|CAA99914.1| 357|Caenorhabditis elegans Hypothetical pr... 27 4.3
U64840-6|AAB04964.1| 574|Caenorhabditis elegans Hypothetical pr... 27 4.3
U53141-5|AAA96107.1| 574|Caenorhabditis elegans Hypothetical pr... 27 4.3
U41532-4|AAK68320.1| 767|Caenorhabditis elegans Hypothetical pr... 27 4.3
U41532-3|AAK68319.1| 797|Caenorhabditis elegans Hypothetical pr... 27 4.3
M38249-1|AAA28060.1| 357|Caenorhabditis elegans G protein alpha... 27 4.3
AY008138-1|AAG32091.1| 357|Caenorhabditis elegans heterotrimeri... 27 4.3
AY008127-1|AAG32080.1| 359|Caenorhabditis elegans heterotrimeri... 27 4.3
AY008124-1|AAG32077.1| 357|Caenorhabditis elegans heterotrimeri... 27 4.3
AF036706-13|AAK39279.2| 359|Caenorhabditis elegans G protein, a... 27 4.3
AC024877-8|AAF60904.1| 357|Caenorhabditis elegans G protein, al... 27 4.3
Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical pr... 26 5.7
Z82285-7|CAB05301.1| 548|Caenorhabditis elegans Hypothetical pr... 26 5.7
U00049-3|AAC47059.1| 339|Caenorhabditis elegans Serpentine rece... 26 5.7
CU457741-4|CAM36345.1| 1259|Caenorhabditis elegans Hypothetical ... 26 5.7
Z82095-7|CAN86628.1| 390|Caenorhabditis elegans Hypothetical pr... 26 7.5
Z82095-6|CAI79281.2| 412|Caenorhabditis elegans Hypothetical pr... 26 7.5
Z82095-5|CAB05026.2| 414|Caenorhabditis elegans Hypothetical pr... 26 7.5
AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical ... 26 7.5
AF016672-3|AAT92072.1| 394|Caenorhabditis elegans Aldehyde dehy... 26 7.5
AF016672-2|AAO38633.1| 512|Caenorhabditis elegans Aldehyde dehy... 26 7.5
AF016672-1|AAB66116.3| 563|Caenorhabditis elegans Aldehyde dehy... 26 7.5
AC006720-3|AAF60447.1| 159|Caenorhabditis elegans Hypothetical ... 26 7.5
Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical pr... 25 10.0
Z50740-2|CAA90608.1| 383|Caenorhabditis elegans Hypothetical pr... 25 10.0
U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein. 25 10.0
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 25 10.0
AF101318-4|AAC69346.1| 337|Caenorhabditis elegans Seven tm rece... 25 10.0
>U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.2 protein.
Length = 181
Score = 100 bits (239), Expect = 3e-22
Identities = 53/81 (65%), Positives = 58/81 (71%)
Frame = +2
Query: 92 MGNMFANLFKWPFWQKKK*EY*WLVWMLLVKLQFYTILKLGEIVTTIPTIGFNVETVEYK 271
MGN+F +LFK F K++ + K LKLGEIVTTIPTIGFNVETVEYK
Sbjct: 1 MGNVFGSLFKGLFG-KREMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYK 59
Query: 272 NISFTVWDVCGQDKIRPLWRH 334
NISFTVWDV GQDKIRPLWRH
Sbjct: 60 NISFTVWDVGGQDKIRPLWRH 80
>AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylation
factor related(20.5 kD) (arf-3) protein.
Length = 180
Score = 95.9 bits (228), Expect = 6e-21
Identities = 43/44 (97%), Positives = 43/44 (97%)
Frame = +2
Query: 203 LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVCGQDKIRPLWRH 334
LKLGEIVTTIPTIGFNVETVEYKNISFTVWDV GQDKIRPLWRH
Sbjct: 37 LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRH 80
Score = 41.9 bits (94), Expect = 1e-04
Identities = 18/25 (72%), Positives = 23/25 (92%)
Frame = +1
Query: 136 KKEMRILMVGLDAAGKTTILYNTQI 210
K+++RILMVGLDAAGKTTILY ++
Sbjct: 15 KRQVRILMVGLDAAGKTTILYKLKL 39
>AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 3 protein.
Length = 180
Score = 95.9 bits (228), Expect = 6e-21
Identities = 43/44 (97%), Positives = 43/44 (97%)
Frame = +2
Query: 203 LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVCGQDKIRPLWRH 334
LKLGEIVTTIPTIGFNVETVEYKNISFTVWDV GQDKIRPLWRH
Sbjct: 37 LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRH 80
Score = 41.9 bits (94), Expect = 1e-04
Identities = 18/25 (72%), Positives = 23/25 (92%)
Frame = +1
Query: 136 KKEMRILMVGLDAAGKTTILYNTQI 210
K+++RILMVGLDAAGKTTILY ++
Sbjct: 15 KRQVRILMVGLDAAGKTTILYKLKL 39
>AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical
protein Y116A8C.12 protein.
Length = 175
Score = 85.8 bits (203), Expect = 7e-18
Identities = 37/44 (84%), Positives = 39/44 (88%)
Frame = +2
Query: 203 LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVCGQDKIRPLWRH 334
LKLG+ VTTIPT+GFNVETV YKNI F VWDV GQDKIRPLWRH
Sbjct: 33 LKLGQSVTTIPTVGFNVETVTYKNIKFNVWDVGGQDKIRPLWRH 76
Score = 44.4 bits (100), Expect = 2e-05
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +1
Query: 109 KFI*MAFLAKKEMRILMVGLDAAGKTTILYNTQI 210
KF+ F KKE+RILM+GLDAAGKTTILY ++
Sbjct: 3 KFLSKIF-GKKELRILMLGLDAAGKTTILYKLKL 35
>Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical
protein F54C9.10 protein.
Length = 180
Score = 74.1 bits (174), Expect = 2e-14
Identities = 31/43 (72%), Positives = 36/43 (83%)
Frame = +2
Query: 203 LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVCGQDKIRPLWR 331
L++GE+VTTIPTIGFNVE VEYKN+ F VWD+ GQ IRP WR
Sbjct: 36 LQVGEVVTTIPTIGFNVEQVEYKNLKFQVWDLGGQTSIRPYWR 78
Score = 40.3 bits (90), Expect = 3e-04
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +1
Query: 139 KEMRILMVGLDAAGKTTILYNTQI 210
+EMRIL++GLD AGKTTILY Q+
Sbjct: 15 REMRILILGLDGAGKTTILYRLQV 38
>U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.1 protein.
Length = 179
Score = 68.1 bits (159), Expect = 1e-12
Identities = 30/44 (68%), Positives = 35/44 (79%)
Frame = +2
Query: 203 LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVCGQDKIRPLWRH 334
LKL E V TIPTIGFNVETV ++ I+ TVWDV GQ KIR LW++
Sbjct: 37 LKLNETVNTIPTIGFNVETVTFQKITLTVWDVGGQKKIRALWKY 80
Score = 34.7 bits (76), Expect = 0.016
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +1
Query: 142 EMRILMVGLDAAGKTTILYNTQI 210
E R LM+GLD AGKTTILY ++
Sbjct: 17 ECRTLMLGLDGAGKTTILYKLKL 39
>Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical
protein ZK1320.6 protein.
Length = 539
Score = 53.6 bits (123), Expect = 3e-08
Identities = 20/44 (45%), Positives = 29/44 (65%)
Frame = +2
Query: 203 LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVCGQDKIRPLWRH 334
+++ ++ PTIGFN+ET+ YKN WDV G K+R LW+H
Sbjct: 392 VQMDTVMAPHPTIGFNIETIHYKNYRLNFWDVGGLPKLRHLWKH 435
Score = 27.5 bits (58), Expect = 2.5
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +1
Query: 142 EMRILMVGLDAAGKTTIL 195
E R++++GLD AGKT+I+
Sbjct: 369 ESRVVLLGLDGAGKTSIV 386
>Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical
protein ZK632.8 protein.
Length = 178
Score = 50.0 bits (114), Expect = 4e-07
Identities = 19/36 (52%), Positives = 25/36 (69%)
Frame = +2
Query: 221 VTTIPTIGFNVETVEYKNISFTVWDVCGQDKIRPLW 328
V T PTIG NVE V Y+N+ F +WD+ GQ+ +R W
Sbjct: 43 VETKPTIGSNVEEVSYRNLDFVIWDIGGQESLRKSW 78
Score = 35.5 bits (78), Expect = 0.009
Identities = 15/21 (71%), Positives = 19/21 (90%)
Frame = +1
Query: 139 KEMRILMVGLDAAGKTTILYN 201
K+ +I++VGLD AGKTTILYN
Sbjct: 16 KKYKIIVVGLDNAGKTTILYN 36
>Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical
protein F22B5.1 protein.
Length = 184
Score = 44.4 bits (100), Expect = 2e-05
Identities = 20/49 (40%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Frame = +2
Query: 197 TILK--LGEIVTTI-PTIGFNVETVEYKNISFTVWDVCGQDKIRPLWRH 334
T++K L E TI PT+GF+++TV +K+ +WDV GQ +R W++
Sbjct: 31 TLMKKFLDEPTDTIEPTLGFDIKTVHFKDFQLNLWDVGGQKSLRSYWKN 79
Score = 32.7 bits (71), Expect = 0.066
Identities = 13/20 (65%), Positives = 19/20 (95%)
Frame = +1
Query: 136 KKEMRILMVGLDAAGKTTIL 195
++EMRIL++GLD AGKTT++
Sbjct: 14 EREMRILILGLDNAGKTTLM 33
>Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical
protein Y57G11C.13 protein.
Length = 185
Score = 42.7 bits (96), Expect = 6e-05
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +2
Query: 182 KLQFYTILKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVCGQDKIRPLW 328
K F ++ G+ IPT+GFN+ + N++ +WD+ GQ + R +W
Sbjct: 33 KTTFVNVIASGQFTEDMIPTVGFNMRKITKGNVTIKLWDIGGQPRFRSMW 82
Score = 25.8 bits (54), Expect = 7.5
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 136 KKEMRILMVGLDAAGKTTIL 195
K+EM + +VGL +GKTT +
Sbjct: 18 KEEMELTLVGLQNSGKTTFV 37
>AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G
protein indispensablefor equal chromosome segregation
protein.
Length = 185
Score = 42.7 bits (96), Expect = 6e-05
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +2
Query: 182 KLQFYTILKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVCGQDKIRPLW 328
K F ++ G+ IPT+GFN+ + N++ +WD+ GQ + R +W
Sbjct: 33 KTTFVNVIASGQFTEDMIPTVGFNMRKITKGNVTIKLWDIGGQPRFRSMW 82
Score = 25.8 bits (54), Expect = 7.5
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 136 KKEMRILMVGLDAAGKTTIL 195
K+EM + +VGL +GKTT +
Sbjct: 18 KEEMELTLVGLQNSGKTTFV 37
>Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical
protein F19H8.3 protein.
Length = 184
Score = 38.7 bits (86), Expect = 0.001
Identities = 18/33 (54%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +2
Query: 233 PTIGFNVETVEYK-NISFTVWDVCGQDKIRPLW 328
PT GFNV+TV +I VWD+ GQ IRP W
Sbjct: 47 PTKGFNVKTVAAMGDIRLNVWDIGGQRSIRPYW 79
Score = 32.7 bits (71), Expect = 0.066
Identities = 14/19 (73%), Positives = 18/19 (94%)
Frame = +1
Query: 139 KEMRILMVGLDAAGKTTIL 195
+E+RIL++GLD AGKTTIL
Sbjct: 16 REIRILLLGLDNAGKTTIL 34
>AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical
protein Y54E10BR.2 protein.
Length = 191
Score = 34.7 bits (76), Expect = 0.016
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 236 TIGFNVETVEYKNISFTVWDVCGQDKIRPLW 328
T+G N VE N WD+ GQ+ +R LW
Sbjct: 56 TVGLNTGNVELNNTCLHFWDLGGQESLRELW 86
Score = 32.3 bits (70), Expect = 0.087
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +1
Query: 127 FLAKKEMRILMVGLDAAGKTTILYNTQ 207
F KK+ +++VGLD AGKTT L T+
Sbjct: 12 FFKKKDYYVVIVGLDNAGKTTFLEQTK 38
>Z83117-3|CAB05570.2| 356|Caenorhabditis elegans Hypothetical
protein M04C7.1 protein.
Length = 356
Score = 34.3 bits (75), Expect = 0.021
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +2
Query: 230 IPTIGFNVETVEYKNISFTVWDVCGQDKIRPLWRH 334
IPT+G +T+E K F ++DV GQ R W H
Sbjct: 181 IPTMGVVQQTIEIKGTKFRIYDVGGQRSERRKWIH 215
>AY008137-1|AAG32090.1| 356|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 356
Score = 34.3 bits (75), Expect = 0.021
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +2
Query: 230 IPTIGFNVETVEYKNISFTVWDVCGQDKIRPLWRH 334
IPT+G +T+E K F ++DV GQ R W H
Sbjct: 181 IPTMGVVQQTIEIKGTKFRIYDVGGQRSERRKWIH 215
>Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical
protein C38D4.8 protein.
Length = 190
Score = 32.7 bits (71), Expect = 0.066
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = +1
Query: 130 LAKKEMRILMVGLDAAGKTTIL 195
L KK++ I++VGLD +GKTTIL
Sbjct: 13 LGKKDVNIVVVGLDNSGKTTIL 34
Score = 32.7 bits (71), Expect = 0.066
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 230 IPTIGFNVETVEYKNISFTVWDVCGQDKIRPLW 328
+PT+G V +N+SF +D+ GQ K R W
Sbjct: 48 VPTVGHVVTNFSTQNLSFHAFDMAGQMKYRSTW 80
>Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical
protein F11A5.4 protein.
Length = 203
Score = 31.1 bits (67), Expect = 0.20
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 242 GFNVETVEYKNISFTVWDVCGQDKIRPL 325
GF ++ K + VWD CGQ++ R L
Sbjct: 44 GFRNLEIDRKKVKLHVWDTCGQERFRSL 71
>AF016441-6|AAX55687.1| 440|Caenorhabditis elegans Paps (adenosine
3'-phosphate 5'-phosphosulfate) transporter protein 1,
isoform b protein.
Length = 440
Score = 30.7 bits (66), Expect = 0.26
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = -2
Query: 294 SHTVKLMFLYSTVSTLNPIV-GIVVTISPNLSIV*NCSFTSSIQTNHQYSHFFFCQKGHL 118
S + +F+YST+ PIV +++TI LSIV S+I H+ + F G +
Sbjct: 363 SGAIGQIFIYSTIERFGPIVFAVIMTIRQMLSIV-----LSTIMYGHELT--FLAAIGFM 415
Query: 117 NKFANIF 97
FA IF
Sbjct: 416 IVFAAIF 422
>AF016441-4|AAX55686.1| 425|Caenorhabditis elegans Paps (adenosine
3'-phosphate 5'-phosphosulfate) transporter protein 1,
isoform a protein.
Length = 425
Score = 30.7 bits (66), Expect = 0.26
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = -2
Query: 294 SHTVKLMFLYSTVSTLNPIV-GIVVTISPNLSIV*NCSFTSSIQTNHQYSHFFFCQKGHL 118
S + +F+YST+ PIV +++TI LSIV S+I H+ + F G +
Sbjct: 348 SGAIGQIFIYSTIERFGPIVFAVIMTIRQMLSIV-----LSTIMYGHELT--FLAAIGFM 400
Query: 117 NKFANIF 97
FA IF
Sbjct: 401 IVFAAIF 407
>U58748-6|AAB52968.1| 193|Caenorhabditis elegans Hypothetical
protein ZK180.4 protein.
Length = 193
Score = 30.3 bits (65), Expect = 0.35
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +1
Query: 121 MAFLAKKEMRILMVGLDAAGKTTILY 198
M LA K+ +++ +GLD AGKTT+L+
Sbjct: 14 MLGLANKKGKLVFLGLDNAGKTTLLH 39
Score = 29.5 bits (63), Expect = 0.61
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 200 ILKLGEIVTTIPTIGFNVETVEYKNISFTVWDVCGQDKIRPLWR 331
+LK I +PT+ E + ISFT +D+ G + R +W+
Sbjct: 40 MLKDDRIAQHVPTLHPTSEQMSLGGISFTTYDLGGHAQARRVWK 83
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 29.1 bits (62), Expect = 0.81
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
Frame = +2
Query: 230 IPTIG--FNVETVEY--KNISFTVWDVCGQDKIRPL 325
I TIG F + T+E K I +WD GQ++ R +
Sbjct: 38 ISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTI 73
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 29.1 bits (62), Expect = 0.81
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
Frame = +2
Query: 230 IPTIG--FNVETVEY--KNISFTVWDVCGQDKIRPL 325
I TIG F + T+E K I +WD GQ++ R +
Sbjct: 38 ISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTI 73
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 29.1 bits (62), Expect = 0.81
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
Frame = +2
Query: 230 IPTIG--FNVETVEY--KNISFTVWDVCGQDKIRPL 325
I TIG F + T+E K I +WD GQ++ R +
Sbjct: 41 ISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTI 76
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 29.1 bits (62), Expect = 0.81
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
Frame = +2
Query: 230 IPTIG--FNVETVEY--KNISFTVWDVCGQDKIRPL 325
I TIG F + T+E K I +WD GQ++ R +
Sbjct: 38 ISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTI 73
>Z74473-3|CAA98948.1| 364|Caenorhabditis elegans Hypothetical
protein F56H9.3 protein.
Length = 364
Score = 28.7 bits (61), Expect = 1.1
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 230 IPTIGFNVETVEYKNISFTVWDVCGQDKIRPLWRH 334
+PT G + KN +F ++DV GQ R W H
Sbjct: 190 VPTSGVIQYKIMLKNFNFRIFDVGGQRAQRRKWLH 224
>Z70781-3|CAA94833.2| 352|Caenorhabditis elegans Hypothetical
protein F57A8.5 protein.
Length = 352
Score = 28.7 bits (61), Expect = 1.1
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +1
Query: 190 ILYNTQIR*NCYNNSHYWVQCGDCRIQK 273
++YN + NC+ S Y ++C CR Q+
Sbjct: 50 LVYNCKWSNNCFETSPYPLKCQSCRFQR 77
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 28.7 bits (61), Expect = 1.1
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
Frame = +2
Query: 224 TTIPTIG--FNVETVEYKN--ISFTVWDVCGQDKIRPL 325
T I TIG F ++T+E K I +WD GQ++ +
Sbjct: 37 TFISTIGIDFKIKTIELKGKKIKLQIWDTAGQERFHTI 74
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 28.7 bits (61), Expect = 1.1
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
Frame = +2
Query: 224 TTIPTIG--FNVETVEYKN--ISFTVWDVCGQDKIRPL 325
T I TIG F ++T+E K I +WD GQ++ +
Sbjct: 37 TFISTIGIDFKIKTIELKGKKIKLQIWDTAGQERFHTI 74
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 28.7 bits (61), Expect = 1.1
Identities = 11/31 (35%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = +2
Query: 239 IGFNVETVEY--KNISFTVWDVCGQDKIRPL 325
+ F+V+TV +N++ +WD GQ++ R L
Sbjct: 496 VDFHVKTVNVDGRNVALQLWDTAGQERFRSL 526
>AY008131-1|AAG32084.1| 364|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 364
Score = 28.7 bits (61), Expect = 1.1
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 230 IPTIGFNVETVEYKNISFTVWDVCGQDKIRPLWRH 334
+PT G + KN +F ++DV GQ R W H
Sbjct: 190 VPTSGVIQYKIMLKNFNFRIFDVGGQRAQRRKWLH 224
>Z72503-4|CAA96595.1| 354|Caenorhabditis elegans Hypothetical
protein C26C6.2 protein.
Length = 354
Score = 28.3 bits (60), Expect = 1.4
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 224 TTIPTIGFNVETVEYKNISFTVWDVCGQDKIRPLWRH 334
T + T G +KN++F ++DV GQ R W H
Sbjct: 178 TRVKTTGIVEVHFTFKNLNFKLFDVGGQRSERKKWIH 214
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 28.3 bits (60), Expect = 1.4
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +2
Query: 242 GFNVETVEYKNISFTVWDVCGQDKIRPLWR 331
G + T++ K I +WD GQ+ R + R
Sbjct: 44 GARMVTIDGKQIKLQIWDTAGQESFRSITR 73
>U00032-5|AAA50636.2| 1009|Caenorhabditis elegans Yeast isw
(imitation swi) homologprotein 1 protein.
Length = 1009
Score = 28.3 bits (60), Expect = 1.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -1
Query: 169 PNQPSIFSFLFLPKRPFK*ICKHIPHF 89
P P +F F F P+R F+ + K I H+
Sbjct: 721 PKLPQVFDFQFYPRRLFELLDKEIYHY 747
>M38251-1|AAA28059.1| 354|Caenorhabditis elegans G-o protein alpha
subunit protein.
Length = 354
Score = 28.3 bits (60), Expect = 1.4
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 224 TTIPTIGFNVETVEYKNISFTVWDVCGQDKIRPLWRH 334
T + T G +KN++F ++DV GQ R W H
Sbjct: 178 TRVKTTGIVEVHFTFKNLNFKLFDVGGQRSERKKWIH 214
>AY008140-1|AAG32093.1| 354|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 354
Score = 28.3 bits (60), Expect = 1.4
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 224 TTIPTIGFNVETVEYKNISFTVWDVCGQDKIRPLWRH 334
T + T G +KN++F ++DV GQ R W H
Sbjct: 178 TRVKTTGIVEVHFTFKNLNFKLFDVGGQRSERKKWIH 214
>Z80789-3|CAB02553.1| 364|Caenorhabditis elegans Hypothetical
protein F48C11.1 protein.
Length = 364
Score = 27.9 bits (59), Expect = 1.9
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +2
Query: 230 IPTIGFNVETVEYKNISFTVWDVCGQDKIRPLWRH 334
I T G N YK + F + DV GQ R W H
Sbjct: 190 ISTTGINELAFNYKKMDFKMVDVGGQRSERRKWIH 224
>Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical
protein D2013.1 protein.
Length = 229
Score = 27.9 bits (59), Expect = 1.9
Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = +2
Query: 185 LQFYTILKLGEIVTTIPTIGFNVETVEYK---NISFTVWDVCGQDKIRPL 325
L+++T K+ EI + F +E + + +WD GQ+K R +
Sbjct: 34 LRYFTEGKMAEISDPTVGVDFYARMIELRPGYRVKLQLWDTAGQEKFRSI 83
>AY008129-1|AAG32082.1| 364|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 364
Score = 27.9 bits (59), Expect = 1.9
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +2
Query: 230 IPTIGFNVETVEYKNISFTVWDVCGQDKIRPLWRH 334
I T G N YK + F + DV GQ R W H
Sbjct: 190 ISTTGINELAFNYKKMDFKMVDVGGQRSERRKWIH 224
>Z19154-5|CAA79557.1| 162|Caenorhabditis elegans Hypothetical
protein C40H1.6 protein.
Length = 162
Score = 27.1 bits (57), Expect = 3.3
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3
Query: 129 FGKKRNENIDGWFGCCW*NYNSIQY 203
F + NE WFG CW +N ++Y
Sbjct: 53 FQLESNERGTKWFGKCWYFHNMVKY 77
>U23171-1|AAC46702.2| 334|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 55 protein.
Length = 334
Score = 27.1 bits (57), Expect = 3.3
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -1
Query: 196 IEL*FYQQHPNQPSIFSFLFLPKRP 122
I L F+ QH + P+I SF LP+ P
Sbjct: 61 ISLGFFTQHRSLPNIDSFAVLPRGP 85
>Z75549-9|CAA99914.1| 357|Caenorhabditis elegans Hypothetical
protein T19C4.6 protein.
Length = 357
Score = 26.6 bits (56), Expect = 4.3
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +2
Query: 224 TTIPTIGFNVETVEYKNISFTVWDVCGQDKIRPLWRH 334
T +PT+G K F V+DV GQ R W H
Sbjct: 178 TRVPTMGVIEVNFTIKGKFFRVFDVGGQRSQRKKWIH 214
>U64840-6|AAB04964.1| 574|Caenorhabditis elegans Hypothetical
protein ZC317.7 protein.
Length = 574
Score = 26.6 bits (56), Expect = 4.3
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = +3
Query: 135 KKRNENIDGWFGCCW*NYNSIQYSN*VKLLQQFPLLGSMWRL*NTKTLVSLCGMYAVR 308
KK+ E I G + N++ + +K + F +WR+ N L CG+ ++R
Sbjct: 298 KKKKEKISGQSNRKFSNFSKDMFVIRLKDVDSFDRNNEIWRIDNHVLLQKFCGVPSLR 355
>U53141-5|AAA96107.1| 574|Caenorhabditis elegans Hypothetical
protein C14C11.2 protein.
Length = 574
Score = 26.6 bits (56), Expect = 4.3
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = +3
Query: 135 KKRNENIDGWFGCCW*NYNSIQYSN*VKLLQQFPLLGSMWRL*NTKTLVSLCGMYAVR 308
KK+ E I G + N++ + +K + F +WR+ N L CG+ ++R
Sbjct: 298 KKKKEKISGQSNRKFSNFSKDMFVIRLKDVDSFDRNNEIWRIDNHVLLQKFCGVPSLR 355
>U41532-4|AAK68320.1| 767|Caenorhabditis elegans Hypothetical
protein F11D5.3b protein.
Length = 767
Score = 26.6 bits (56), Expect = 4.3
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +2
Query: 68 KYYSQSIKMGNMFANLFKWPFWQKKK 145
K Y + N+F N KW W++K+
Sbjct: 194 KLYDGEVGKNNVFVNHHKWVGWRRKR 219
>U41532-3|AAK68319.1| 797|Caenorhabditis elegans Hypothetical
protein F11D5.3a protein.
Length = 797
Score = 26.6 bits (56), Expect = 4.3
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +2
Query: 68 KYYSQSIKMGNMFANLFKWPFWQKKK 145
K Y + N+F N KW W++K+
Sbjct: 224 KLYDGEVGKNNVFVNHHKWVGWRRKR 249
>M38249-1|AAA28060.1| 357|Caenorhabditis elegans G protein alpha
subunit protein.
Length = 357
Score = 26.6 bits (56), Expect = 4.3
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +2
Query: 224 TTIPTIGFNVETVEYKNISFTVWDVCGQDKIRPLWRH 334
T +PT+G K F V+DV GQ R W H
Sbjct: 178 TRVPTMGVIEVNFTIKGKFFRVFDVGGQRSQRKKWIH 214
>AY008138-1|AAG32091.1| 357|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 357
Score = 26.6 bits (56), Expect = 4.3
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +2
Query: 224 TTIPTIGFNVETVEYKNISFTVWDVCGQDKIRPLWRH 334
T I T G YK+ F V+DV GQ R W H
Sbjct: 177 TRIKTTGIVETQFVYKDRLFLVFDVGGQRSERKKWIH 213
>AY008127-1|AAG32080.1| 359|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 359
Score = 26.6 bits (56), Expect = 4.3
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +2
Query: 230 IPTIGFNVETVEYKNISFTVWDVCGQDKIRPLWRH 334
+ + G T YK++ F ++DV GQ R W H
Sbjct: 182 VKSTGIVETTFMYKDLCFKMFDVGGQRSERKKWIH 216
>AY008124-1|AAG32077.1| 357|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 357
Score = 26.6 bits (56), Expect = 4.3
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +2
Query: 224 TTIPTIGFNVETVEYKNISFTVWDVCGQDKIRPLWRH 334
T +PT+G K F V+DV GQ R W H
Sbjct: 178 TRVPTMGVIEVNFTIKGKFFRVFDVGGQRSQRKKWIH 214
>AF036706-13|AAK39279.2| 359|Caenorhabditis elegans G protein,
alpha subunit protein 4 protein.
Length = 359
Score = 26.6 bits (56), Expect = 4.3
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +2
Query: 230 IPTIGFNVETVEYKNISFTVWDVCGQDKIRPLWRH 334
+ + G T YK++ F ++DV GQ R W H
Sbjct: 182 VKSTGIVETTFMYKDLCFKMFDVGGQRSERKKWIH 216
>AC024877-8|AAF60904.1| 357|Caenorhabditis elegans G protein, alpha
subunit protein 16 protein.
Length = 357
Score = 26.6 bits (56), Expect = 4.3
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +2
Query: 224 TTIPTIGFNVETVEYKNISFTVWDVCGQDKIRPLWRH 334
T I T G YK+ F V+DV GQ R W H
Sbjct: 177 TRIKTTGIVETQFVYKDRLFLVFDVGGQRSERKKWIH 213
>Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical
protein F11A5.3 protein.
Length = 201
Score = 26.2 bits (55), Expect = 5.7
Identities = 9/30 (30%), Positives = 15/30 (50%)
Frame = +2
Query: 242 GFNVETVEYKNISFTVWDVCGQDKIRPLWR 331
G+ ++ + VWD CGQ+ R + R
Sbjct: 44 GYKDLQIDKYKVRLRVWDTCGQENFRSIIR 73
>Z82285-7|CAB05301.1| 548|Caenorhabditis elegans Hypothetical
protein T28F3.8 protein.
Length = 548
Score = 26.2 bits (55), Expect = 5.7
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -1
Query: 295 IPHSETNVFVFYSLHIEPNSGNCCN-NFT*FEYCIEL*FYQQHPNQPSI 152
+PHSET +V +++ I N N+T IE+ FY+ NQ ++
Sbjct: 258 VPHSETESYVNFTITISVGLNGWGNFNYT-NTNGIEVIFYRSQANQKTV 305
>U00049-3|AAC47059.1| 339|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 7 protein.
Length = 339
Score = 26.2 bits (55), Expect = 5.7
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1
Query: 217 NCYNNSHYWVQC 252
N Y NS YW+QC
Sbjct: 23 NFYENSKYWIQC 34
>CU457741-4|CAM36345.1| 1259|Caenorhabditis elegans Hypothetical
protein C42C1.4a protein.
Length = 1259
Score = 26.2 bits (55), Expect = 5.7
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -1
Query: 175 QHPNQPSIFSFLFLPKRPFK*ICK 104
Q+P +P+I SFL+L R F+ + K
Sbjct: 826 QNPMRPTILSFLYLNDRKFEDLIK 849
>Z82095-7|CAN86628.1| 390|Caenorhabditis elegans Hypothetical
protein ZK849.2c protein.
Length = 390
Score = 25.8 bits (54), Expect = 7.5
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -1
Query: 331 PPQWSDFVLTAYIPHSETNVFVFYSLHIEPNSGNCCNN 218
P + SD T I HS+ +++ YS+ EP S NN
Sbjct: 347 PDEDSDDDGTVTIEHSDGSIYNLYSME-EPTSSRSSNN 383
>Z82095-6|CAI79281.2| 412|Caenorhabditis elegans Hypothetical
protein ZK849.2b protein.
Length = 412
Score = 25.8 bits (54), Expect = 7.5
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -1
Query: 331 PPQWSDFVLTAYIPHSETNVFVFYSLHIEPNSGNCCNN 218
P + SD T I HS+ +++ YS+ EP S NN
Sbjct: 369 PDEDSDDDGTVTIEHSDGSIYNLYSME-EPTSSRSSNN 405
>Z82095-5|CAB05026.2| 414|Caenorhabditis elegans Hypothetical
protein ZK849.2a protein.
Length = 414
Score = 25.8 bits (54), Expect = 7.5
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -1
Query: 331 PPQWSDFVLTAYIPHSETNVFVFYSLHIEPNSGNCCNN 218
P + SD T I HS+ +++ YS+ EP S NN
Sbjct: 371 PDEDSDDDGTVTIEHSDGSIYNLYSME-EPTSSRSSNN 407
>AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical
protein Y45F3A.2 protein.
Length = 216
Score = 25.8 bits (54), Expect = 7.5
Identities = 10/31 (32%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +2
Query: 239 IGFNVETVEYKN--ISFTVWDVCGQDKIRPL 325
+ F ++TV+ N I +WD GQ++ R +
Sbjct: 42 VDFMIKTVKVGNDKIKLQIWDTAGQERFRSI 72
>AF016672-3|AAT92072.1| 394|Caenorhabditis elegans Aldehyde
dehydrogenase protein6, isoform c protein.
Length = 394
Score = 25.8 bits (54), Expect = 7.5
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -2
Query: 243 PIVGIVVTISPNLSIV*NCSFTSSIQT 163
P+ G V+T SP+LS V +FT S+ T
Sbjct: 267 PVFGDVITASPHLSAV---NFTGSVPT 290
>AF016672-2|AAO38633.1| 512|Caenorhabditis elegans Aldehyde
dehydrogenase protein6, isoform b protein.
Length = 512
Score = 25.8 bits (54), Expect = 7.5
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -2
Query: 243 PIVGIVVTISPNLSIV*NCSFTSSIQT 163
P+ G V+T SP+LS V +FT S+ T
Sbjct: 267 PVFGDVITASPHLSAV---NFTGSVPT 290
>AF016672-1|AAB66116.3| 563|Caenorhabditis elegans Aldehyde
dehydrogenase protein6, isoform a protein.
Length = 563
Score = 25.8 bits (54), Expect = 7.5
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -2
Query: 243 PIVGIVVTISPNLSIV*NCSFTSSIQT 163
P+ G V+T SP+LS V +FT S+ T
Sbjct: 267 PVFGDVITASPHLSAV---NFTGSVPT 290
>AC006720-3|AAF60447.1| 159|Caenorhabditis elegans Hypothetical
protein Y17G9B.6 protein.
Length = 159
Score = 25.8 bits (54), Expect = 7.5
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -1
Query: 181 YQQHPNQPSIFSFLFLPKRPFK*ICKHIPHFYA 83
Y H N PS+ S F +PF I H F A
Sbjct: 83 YCYHSNTPSLVSLFFSHLQPFLAIFSHFQPFSA 115
>Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical
protein K03D3.10 protein.
Length = 195
Score = 25.4 bits (53), Expect = 10.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 218 IVTTIPTIGFNVETVEYKNISFTVWDVCGQD 310
I+T T NV V+ + I+ ++WD GQD
Sbjct: 33 ILTVFDTYSTNV-MVDGRPINLSLWDTAGQD 62
>Z50740-2|CAA90608.1| 383|Caenorhabditis elegans Hypothetical
protein F31B12.3 protein.
Length = 383
Score = 25.4 bits (53), Expect = 10.0
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = -1
Query: 331 PPQWSDFVLTAYIPHSETNVFVFYSLHIEPNSGNCCNN 218
P + F L +P S +N FVF IE N CC N
Sbjct: 46 PNEEKIFELLRRLP-STSNFFVFDYWTIEDNFETCCRN 82
>U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein.
Length = 195
Score = 25.4 bits (53), Expect = 10.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 218 IVTTIPTIGFNVETVEYKNISFTVWDVCGQD 310
I+T T NV V+ + I+ ++WD GQD
Sbjct: 33 ILTVFDTYSTNV-MVDGRPINLSLWDTAGQD 62
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 25.4 bits (53), Expect = 10.0
Identities = 10/37 (27%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +2
Query: 221 VTTIPTIGFNVETVEY--KNISFTVWDVCGQDKIRPL 325
+TTI + F + T++ + + +WD GQ++ R +
Sbjct: 40 ITTIG-VDFKIRTMDINGQRVKLQIWDTAGQERFRTI 75
>AF101318-4|AAC69346.1| 337|Caenorhabditis elegans Seven tm
receptor protein 68 protein.
Length = 337
Score = 25.4 bits (53), Expect = 10.0
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Frame = -2
Query: 330 LHSGL-ILS*PHTSHTVKLMFLYSTVSTLN---PIVGIVVTISPNLSIV*NCSFTSSIQT 163
+ SGL + + P+T H K L+ +V+TLN ++ +++++ IV SF ++Q
Sbjct: 53 IFSGLEVTARPYT-HNYKASLLFFSVTTLNLPREVICLMISLWGGCWIV-IVSFI-AVQF 109
Query: 162 NHQYSHFFFCQKGHLNKFANIFPIFML 82
++Y F QK + KF + IF L
Sbjct: 110 VYRYLCLFKAQK--IKKFEGVRSIFWL 134
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,474,758
Number of Sequences: 27780
Number of extensions: 178847
Number of successful extensions: 647
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 645
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 408121444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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