Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_J09
(334 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 23 1.3
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 23 1.3
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 22 1.7
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 22 1.7
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 21 3.0
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 21 3.9
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 21 5.2
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 21 5.2
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 21 5.2
AF393492-1|AAL60417.1| 136|Apis mellifera odorant binding prote... 20 6.8
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 20 9.1
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 20 9.1
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 22.6 bits (46), Expect = 1.3
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = -1
Query: 256 LHIEPNSGNCCNNF 215
LH++P NCC ++
Sbjct: 391 LHMQPRKKNCCRSW 404
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 22.6 bits (46), Expect = 1.3
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = -1
Query: 256 LHIEPNSGNCCNNF 215
LH++P NCC ++
Sbjct: 391 LHMQPRKKNCCRSW 404
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 22.2 bits (45), Expect = 1.7
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 232 SHYWVQCGDCRIQKH*FHCVGCMRSGQNQTTVEA 333
S YW + DC ++K R+G QTT+ A
Sbjct: 282 SEYWEEVFDCLLKKE--------RNGPTQTTLNA 307
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 22.2 bits (45), Expect = 1.7
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 232 SHYWVQCGDCRIQKH*FHCVGCMRSGQNQTTVEA 333
S YW + DC ++K R+G QTT+ A
Sbjct: 372 SEYWEEVFDCLLKKE--------RNGPTQTTLNA 397
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 21.4 bits (43), Expect = 3.0
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = -2
Query: 84 LCE*YFSEAKVFRIKKKLHSENSIKSS 4
LC F K + K HS++S+ S
Sbjct: 264 LCHETFGSKKTMELHIKTHSDSSVVGS 290
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.0 bits (42), Expect = 3.9
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +2
Query: 293 DVCGQDKIRPLWRH 334
DV DK+ PL+ H
Sbjct: 267 DVSSNDKVHPLYGH 280
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 20.6 bits (41), Expect = 5.2
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 106 KHIPHFYAL 80
KHIPHF +L
Sbjct: 250 KHIPHFTSL 258
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 20.6 bits (41), Expect = 5.2
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 106 KHIPHFYAL 80
KHIPHF +L
Sbjct: 250 KHIPHFTSL 258
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 20.6 bits (41), Expect = 5.2
Identities = 6/11 (54%), Positives = 7/11 (63%)
Frame = +3
Query: 171 CCW*NYNSIQY 203
CCW +N QY
Sbjct: 605 CCWHCFNCTQY 615
>AF393492-1|AAL60417.1| 136|Apis mellifera odorant binding
protein ASP4 protein.
Length = 136
Score = 20.2 bits (40), Expect = 6.8
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -3
Query: 92 FLCFANSIFQKQRFLE 45
F CF +FQK F++
Sbjct: 52 FGCFEACVFQKLHFMD 67
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 19.8 bits (39), Expect = 9.1
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2
Query: 224 TTIPTIGFNVETVEYKN 274
TTI I +NV + +Y+N
Sbjct: 309 TTINPILYNVMSAKYRN 325
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 19.8 bits (39), Expect = 9.1
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = +2
Query: 224 TTIPTIGFNVETVEYKN 274
TTI I +N+ +++Y+N
Sbjct: 321 TTINPILYNLMSIKYRN 337
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,835
Number of Sequences: 438
Number of extensions: 2267
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 7466580
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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