Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_J07
         (411 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC023981-1|AAH23981.1|  354|Homo sapiens carbonic anhydrase XII ...    29   4.5  
AF051882-1|AAC39789.1|  354|Homo sapiens carbonic anhydrase XII ...    29   4.5  
AF037335-1|AAC63952.1|  354|Homo sapiens carbonic anhydrase prec...    29   4.5  
D38549-1|BAA07552.1| 1271|Homo sapiens KIAA0068 protein.               29   7.9  
BC005097-1|AAH05097.1| 1253|Homo sapiens cytoplasmic FMR1 intera...    29   7.9  
AY763579-1|AAW51478.1|  822|Homo sapiens cytoplasmic FMR1 intera...    29   7.9  
AY763578-1|AAW51477.1| 1253|Homo sapiens cytoplasmic FMR1 intera...    29   7.9  
AY763577-1|AAW51476.1| 1253|Homo sapiens cytoplasmic FMR1 intera...    29   7.9  
AK127094-1|BAC86825.1|  822|Homo sapiens protein ( Homo sapiens ...    29   7.9  

>BC023981-1|AAH23981.1|  354|Homo sapiens carbonic anhydrase XII
           protein.
          Length = 354

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +3

Query: 168 RLVIRMFNTFQIRLCASMTLICQSSIKMYGQQHICIVIFLKLYFFR 305
           RLV   F+  Q+   A ++L    S+ + G   ICIV+ + ++ FR
Sbjct: 283 RLVYTSFSQVQVCTAAGLSLGIILSLALAGILGICIVVVVSIWLFR 328


>AF051882-1|AAC39789.1|  354|Homo sapiens carbonic anhydrase XII
           precursor protein.
          Length = 354

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +3

Query: 168 RLVIRMFNTFQIRLCASMTLICQSSIKMYGQQHICIVIFLKLYFFR 305
           RLV   F+  Q+   A ++L    S+ + G   ICIV+ + ++ FR
Sbjct: 283 RLVYTSFSQVQVCTAAGLSLGIILSLALAGILGICIVVVVSIWLFR 328


>AF037335-1|AAC63952.1|  354|Homo sapiens carbonic anhydrase
           precursor protein.
          Length = 354

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +3

Query: 168 RLVIRMFNTFQIRLCASMTLICQSSIKMYGQQHICIVIFLKLYFFR 305
           RLV   F+  Q+   A ++L    S+ + G   ICIV+ + ++ FR
Sbjct: 283 RLVYTSFSQVQVCTAAGLSLGIILSLALAGILGICIVVVVSIWLFR 328


>D38549-1|BAA07552.1| 1271|Homo sapiens KIAA0068 protein.
          Length = 1271

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 15/28 (53%), Positives = 17/28 (60%)
 Frame = -3

Query: 343 ILKFHSHHFFITHLKKYNFKKITMQICC 260
           I KFH   FF THL   NF + T+Q CC
Sbjct: 610 IEKFHRESFFYTHL--INFSE-TLQQCC 634


>BC005097-1|AAH05097.1| 1253|Homo sapiens cytoplasmic FMR1
           interacting protein 1 protein.
          Length = 1253

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 15/28 (53%), Positives = 17/28 (60%)
 Frame = -3

Query: 343 ILKFHSHHFFITHLKKYNFKKITMQICC 260
           I KFH   FF THL   NF + T+Q CC
Sbjct: 592 IEKFHRESFFYTHL--INFSE-TLQQCC 616


>AY763579-1|AAW51478.1|  822|Homo sapiens cytoplasmic FMR1
           interacting protein 1 isoform 4 protein.
          Length = 822

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 15/28 (53%), Positives = 17/28 (60%)
 Frame = -3

Query: 343 ILKFHSHHFFITHLKKYNFKKITMQICC 260
           I KFH   FF THL   NF + T+Q CC
Sbjct: 161 IEKFHRESFFYTHL--INFSE-TLQQCC 185


>AY763578-1|AAW51477.1| 1253|Homo sapiens cytoplasmic FMR1
           interacting protein 1 isoform 3 protein.
          Length = 1253

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 15/28 (53%), Positives = 17/28 (60%)
 Frame = -3

Query: 343 ILKFHSHHFFITHLKKYNFKKITMQICC 260
           I KFH   FF THL   NF + T+Q CC
Sbjct: 592 IEKFHRESFFYTHL--INFSE-TLQQCC 616


>AY763577-1|AAW51476.1| 1253|Homo sapiens cytoplasmic FMR1
           interacting protein 1 isoform 1 protein.
          Length = 1253

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 15/28 (53%), Positives = 17/28 (60%)
 Frame = -3

Query: 343 ILKFHSHHFFITHLKKYNFKKITMQICC 260
           I KFH   FF THL   NF + T+Q CC
Sbjct: 592 IEKFHRESFFYTHL--INFSE-TLQQCC 616


>AK127094-1|BAC86825.1|  822|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45151 fis, clone BRAWH3042447, highly  similar
           to Homo sapiens p53 inducible protein (PIR121). ).
          Length = 822

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 15/28 (53%), Positives = 17/28 (60%)
 Frame = -3

Query: 343 ILKFHSHHFFITHLKKYNFKKITMQICC 260
           I KFH   FF THL   NF + T+Q CC
Sbjct: 161 IEKFHRESFFYTHL--INFSE-TLQQCC 185


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,233,595
Number of Sequences: 237096
Number of extensions: 669339
Number of successful extensions: 997
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 997
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3030544982
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)