Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_J06
(526 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0985 - 22042801-22042963,22043019-22043138,22043261-220435... 133 9e-32
08_02_0162 + 13464698-13464974,13465719-13465837,13465920-134665... 37 0.009
05_03_0022 + 7452234-7452389,7452955-7453113 35 0.035
04_04_0435 - 25170348-25170593,25170989-25171189,25171580-251717... 35 0.035
07_03_1316 + 25736931-25737206,25737276-25737329,25738036-257381... 31 0.43
06_03_0614 - 22753092-22753349,22754059-22754277,22754712-227549... 31 0.43
05_03_0403 - 13534954-13535462,13537895-13538050,13538545-13538644 31 0.57
10_08_0254 + 16236689-16236793,16237760-16237808,16237988-162380... 30 0.99
09_03_0087 - 12237226-12237346,12237423-12237555,12237641-122377... 30 0.99
10_08_0747 - 20272157-20272456,20272538-20272664,20272770-202728... 30 1.3
04_04_0082 - 22603038-22603472,22603561-22604499 29 1.7
11_05_0068 - 18782658-18782984,18784634-18784783,18784853-187857... 29 2.3
05_07_0257 + 28719980-28720220,28721412-28721455,28722521-287225... 29 2.3
04_04_1263 - 32207636-32207938,32208020-32208170,32208263-322085... 29 2.3
03_05_0066 - 20455976-20456161,20456251-20456347,20456608-204567... 29 2.3
07_01_0688 - 5211484-5211626,5211730-5211826,5211930-5212105,521... 29 3.0
07_01_0513 + 3828196-3828309,3828408-3828722,3828823-3828879,382... 29 3.0
11_01_0002 + 3386-3541,3619-3717,4114-4182,4275-4459,4662-4677 28 4.0
05_01_0290 + 2270749-2271037,2272227-2272363,2272660-2272805,227... 28 4.0
12_01_0001 + 1777-1935,2002-2109,2492-2560,2652-2836,3040-3055 28 5.3
10_08_0251 - 16188603-16188944 28 5.3
09_02_0588 + 10967169-10967286,10967420-10967969,10968385-10968487 28 5.3
05_05_0228 + 23454434-23455456,23456151-23456555,23456657-23457004 28 5.3
04_03_0053 - 10286076-10286516,10286560-10287586,10287756-102880... 28 5.3
04_03_0812 - 19922208-19922357,19922448-19922564,19922681-199227... 27 7.0
02_05_0627 + 30463452-30463774,30463841-30463956,30464125-304643... 27 7.0
04_02_0004 - 8430902-8431210,8431295-8431445,8431542-8431830,843... 27 9.2
03_02_0553 - 9420960-9421164,9421634-9421812,9421902-9421970,942... 27 9.2
>10_08_0985 -
22042801-22042963,22043019-22043138,22043261-22043562,
22044055-22044351,22044448-22044556,22044826-22045358,
22045446-22045644,22045741-22045865,22045937-22046020,
22046093-22046221,22046337-22046465,22046593-22046739,
22047106-22047346,22047859-22047980
Length = 899
Score = 133 bits (321), Expect = 9e-32
Identities = 68/167 (40%), Positives = 99/167 (59%), Gaps = 4/167 (2%)
Frame = +1
Query: 37 GYENVIVVDGCPQVGPERLEKLQSVINKIFSKFGKIVNE--YYPTT-ESGATTGFIFLEY 207
G+ NV+VVD P V PE+ EKL++VI KI+S+ G I + P E+ T G+ F+EY
Sbjct: 58 GFANVVVVDNLPVVPPEKFEKLENVIRKIYSQIGAIKEGGLWMPVNPETKKTYGYCFIEY 117
Query: 208 TNPQNAAEAVKATNNCKLDKQHTFLVNLFTDFNKYSDIPKEWEPPSPQPFKVQSDLQWYL 387
PQ A A + TN KLDK H F VN+F DF+KY +P EW P +P+ +LQ +L
Sbjct: 118 NTPQEAELAREKTNGYKLDKSHIFAVNMFDDFDKYMKVPDEWMPAEIKPYTPGENLQKWL 177
Query: 388 MDPDAYDQFLVGIGTGVSLQVWQNALPE-PLMLQERPNWTETYAVWS 525
D A DQF++ GT + W +A + P ++ ++ WT+++ WS
Sbjct: 178 ADEKARDQFVIRAGTFTEV-YWNDARQKMPELVFQKQYWTDSFIQWS 223
>08_02_0162 +
13464698-13464974,13465719-13465837,13465920-13466579,
13466686-13466763,13466849-13466938,13467241-13467378,
13467730-13467738
Length = 456
Score = 37.1 bits (82), Expect = 0.009
Identities = 19/75 (25%), Positives = 36/75 (48%)
Frame = +1
Query: 112 INKIFSKFGKIVNEYYPTTESGATTGFIFLEYTNPQNAAEAVKATNNCKLDKQHTFLVNL 291
+ +IF KFG I + G + F F+ + NP +AA AV+ N K D + ++
Sbjct: 234 LKEIFGKFGPITSVVVMREGDGKSRCFGFVNFENPDDAARAVEDLNGKKFDDKEWYVCRA 293
Query: 292 FTDFNKYSDIPKEWE 336
+ ++ +++E
Sbjct: 294 QKKSEREMELKEKFE 308
>05_03_0022 + 7452234-7452389,7452955-7453113
Length = 104
Score = 35.1 bits (77), Expect = 0.035
Identities = 21/74 (28%), Positives = 37/74 (50%)
Frame = +1
Query: 28 ESDGYENVIVVDGCPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTESGATTGFIFLEY 207
+S G E+ + V P ER K FS +G + +E E+G + GF F+ +
Sbjct: 17 DSKGQESRVYVGNLPYRADERSLK------DSFSNYGAVSSEIAVDRETGRSRGFGFVSF 70
Query: 208 TNPQNAAEAVKATN 249
+ ++A++A+K N
Sbjct: 71 QDSKSASDAIKGMN 84
>04_04_0435 -
25170348-25170593,25170989-25171189,25171580-25171756,
25172284-25172418,25173131-25173262,25173292-25173369,
25173452-25174108,25174210-25174328,25175897-25176173
Length = 673
Score = 35.1 bits (77), Expect = 0.035
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +1
Query: 112 INKIFSKFGKIVNEYYPTTESGATTGFIFLEYTNPQNAAEAVKATNNCKLDKQHTFL 282
++ FS FG I++ T E G + GF F++Y + A A+K+ N ++ + ++
Sbjct: 143 LHDTFSAFGNILSCKVATDEMGQSKGFGFVQYDKGEAAQSAIKSLNGMLINDKPVYV 199
>07_03_1316 +
25736931-25737206,25737276-25737329,25738036-25738189,
25740235-25740313,25740413-25740492,25740588-25740654,
25741548-25741619,25742071-25742223,25742309-25742392,
25742811-25742877
Length = 361
Score = 31.5 bits (68), Expect = 0.43
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +1
Query: 112 INKIFSKFGKIVNEYYP-TTESGATTGFIFLEYTNPQNAAEAV 237
++ +F K+G++V+ Y P +G + GF F+ Y A +AV
Sbjct: 168 LSPLFEKYGEVVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAV 210
>06_03_0614 -
22753092-22753349,22754059-22754277,22754712-22754960,
22755186-22755275,22755379-22755456,22755562-22756337,
22757042-22757384
Length = 670
Score = 31.5 bits (68), Expect = 0.43
Identities = 22/100 (22%), Positives = 41/100 (41%), Gaps = 2/100 (2%)
Frame = +1
Query: 124 FSKFGKIVNEYYPTTESGATTGFIFLEYTNPQNAAEAVKATNNCKLDKQHTFLVNLFTDF 303
FS FG I + +G + F F+ + + A AVK N + ++
Sbjct: 260 FSSFGAITSAIVMRDANGLSRCFGFVNFEKSECARNAVKNLNGKSIGDMVLYVARAQKKS 319
Query: 304 NKYSDIPKEWEPPSPQPFKVQSDLQWYL--MDPDAYDQFL 417
+ +++ ++E Q F+ + YL +D D D+ L
Sbjct: 320 ERQAELKAKFEHDKNQKFEKLQTVNLYLKNLDDDINDEHL 359
>05_03_0403 - 13534954-13535462,13537895-13538050,13538545-13538644
Length = 254
Score = 31.1 bits (67), Expect = 0.57
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 118 KIFSKFGKIVNEYYPTTESGAT-TGFIFLEYTNPQNAAEAVKATN 249
++F +FG + Y PT SG T GF + + ++A EAV+A N
Sbjct: 191 ELFGRFGPLWMWYVPTRGSGGTCKGFGCVVFQRHRHAEEAVEALN 235
>10_08_0254 +
16236689-16236793,16237760-16237808,16237988-16238076,
16238178-16238234,16238684-16238746,16238828-16238893,
16239520-16239606,16239691-16239784,16240351-16240673,
16241022-16241048,16241065-16241145,16241445-16241476,
16242126-16242266,16242455-16242516,16243170-16243387
Length = 497
Score = 30.3 bits (65), Expect = 0.99
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +1
Query: 61 DGCPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTE-SGATTGFIFLEYTNPQNAAEAV 237
D VG + + ++ ++F + G +VN Y P + G+ F+E+ + ++A A+
Sbjct: 24 DATTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
Query: 238 KATNNCKL 261
K N KL
Sbjct: 84 KILNMIKL 91
>09_03_0087 -
12237226-12237346,12237423-12237555,12237641-12237730,
12238992-12239198,12239738-12239813,12240019-12240148,
12241024-12241121
Length = 284
Score = 30.3 bits (65), Expect = 0.99
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +1
Query: 67 CPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTE 171
CP +GP ++K+ V+ + SK+G + + T +
Sbjct: 152 CPDIGPAEVQKMADVVKLLESKYGTKITPLFITID 186
>10_08_0747 - 20272157-20272456,20272538-20272664,20272770-20272843,
20272928-20272971,20273697-20276223
Length = 1023
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Frame = +1
Query: 103 QSVINKIFSKFGKIVNE----YYPTTESGATTGFIFLEYTNPQNAAEAVKATN 249
+S I K+FS FGKI+ E + + G G+ F++YT + A A + N
Sbjct: 882 ESDIIKMFSPFGKIIAEDFLWHTRGPKRGEPRGYAFVQYTTKEEAQLAKEKMN 934
>04_04_0082 - 22603038-22603472,22603561-22604499
Length = 457
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3
Query: 308 LLKSVNRFTKNVCCLSNLQLFVAFTASAAFWGLV 207
LLK +K+V C+ N Q AFT+S +G+V
Sbjct: 12 LLKGTAHASKDVYCIYNSQALTAFTSSLYAFGMV 45
>11_05_0068 -
18782658-18782984,18784634-18784783,18784853-18785716,
18785877-18786005,18786112-18786188,18786507-18786607,
18786772-18786896
Length = 590
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -3
Query: 305 LKSVNRFTKNVCCLSNLQLFVAFTASAAFWGLVYSKNMNP 186
LKS N + CC + + + TA F+GL+ +K MNP
Sbjct: 85 LKSTNFVSIACCCCNTVFINFQLTADQCFFGLM-AKRMNP 123
>05_07_0257 +
28719980-28720220,28721412-28721455,28722521-28722590,
28722693-28722816,28723420-28724060,28725100-28725364,
28725434-28725713,28726042-28726209,28726867-28727358,
28727432-28727689
Length = 860
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -1
Query: 436 PLYQCQPGTGHRHLDPSD 383
PL QPG GH H +PSD
Sbjct: 823 PLAPTQPGLGHEHRNPSD 840
>04_04_1263 - 32207636-32207938,32208020-32208170,32208263-32208500,
32208604-32208814,32208927-32209108,32209196-32209297,
32210002-32211187,32212103-32212499,32212551-32212582,
32212885-32213157,32213307-32213394,32213486-32213723,
32213824-32214034,32214119-32214300,32214378-32214479,
32214801-32216224,32216751-32216822,32217688-32217719,
32218186-32218263,32218425-32218512,32218608-32218845,
32219060-32219162,32219386-32219558,32219644-32219745,
32219825-32220606,32220659-32221012,32224055-32224140,
32224250-32224400,32224534-32224771,32224876-32225119,
32225190-32225368,32225577-32225675,32225835-32227083
Length = 3195
Score = 29.1 bits (62), Expect = 2.3
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -2
Query: 429 TNANQELVIGIWIHQIP 379
TN+N L +GIW H+IP
Sbjct: 2433 TNSNATLYVGIWYHKIP 2449
>03_05_0066 -
20455976-20456161,20456251-20456347,20456608-20456738,
20456814-20456869,20457498-20457543
Length = 171
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = +1
Query: 109 VINKIFSKFGKIVNEYYPTTESGATTGFIFLEYTNPQNAAEAVKATNNCKLDKQ 270
V+ + FS +G++V P G GF+ +Y+N +A EA++ N +L Q
Sbjct: 48 VLKQAFSPYGELVYVKIPV---GKRCGFV--QYSNRASAEEAIRMLNGSQLGGQ 96
>07_01_0688 -
5211484-5211626,5211730-5211826,5211930-5212105,
5212240-5212631,5212712-5212960,5213046-5213188,
5213283-5213402,5214491-5214835
Length = 554
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +1
Query: 10 LEQKPKESDGYENVIVVDGCPQVGPERLEKLQSVIN 117
L K KE+D N ++VDG +G +LE++++ I+
Sbjct: 208 LVPKDKEADVINNRLIVDGANGIGGLKLEEIKAKIS 243
>07_01_0513 +
3828196-3828309,3828408-3828722,3828823-3828879,
3829668-3829826,3829918-3830028,3830173-3830259,
3830359-3830591,3830808-3830886,3831173-3831316,
3831529-3831568,3831667-3831729,3832193-3832224,
3832320-3832361,3832444-3832557
Length = 529
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = -3
Query: 338 GSHSFGISEYLLKSVNRFTKNVCCLSNLQLFVAFTASAAFWGLVYSKNMNP 186
G+H + ++YL ++R TK V C + + F S A+W + +K NP
Sbjct: 222 GTHVYPKNKYLTLQMSRSTKGVVCEDVFESLIVF--SEAWW--IGTKEENP 268
>11_01_0002 + 3386-3541,3619-3717,4114-4182,4275-4459,4662-4677
Length = 174
Score = 28.3 bits (60), Expect = 4.0
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +1
Query: 112 INKIFSKFGKIVNEYYPTTESGATTGFIFLEYTNPQNAAEAVKATNNCKLD 264
I ++FS+ G + +SG + G + ++ +A AVK NN +LD
Sbjct: 84 IKELFSEVGDVKRYSINYDKSGRSKGTAEVVFSRKSDALAAVKRYNNVQLD 134
>05_01_0290 +
2270749-2271037,2272227-2272363,2272660-2272805,
2272853-2272877
Length = 198
Score = 28.3 bits (60), Expect = 4.0
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +1
Query: 94 EKLQSVINKIFSKFGKIVNEYYPTTE-SGATTGFIFLEYTNPQNAAEAVKATNNCKL 261
E + ++ IF FG++ N + +G G+ +EY + A A+KA + +L
Sbjct: 111 EAQEDDLHNIFRDFGQVKNLHLNLDRRTGFVKGYALIEYETFEEAQAAIKALDGTEL 167
>12_01_0001 + 1777-1935,2002-2109,2492-2560,2652-2836,3040-3055
Length = 178
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +1
Query: 112 INKIFSKFGKIVNEYYPTTESGATTGFIFLEYTNPQNAAEAVKATNNCKLD 264
I ++FS+ G + SG + G + ++ +A AVK NN +LD
Sbjct: 88 IKELFSEVGDVKRYSINYDRSGRSKGTAEVVFSRKSDALAAVKRYNNVQLD 138
>10_08_0251 - 16188603-16188944
Length = 113
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +3
Query: 3 TRVGAKA-KGI*WLRECDRCRWLPTGRARAPR 95
T GA A +G W RE RW+P R R PR
Sbjct: 56 TGTGAVAGEGTDWSREIRPQRWVPLERCRRPR 87
>09_02_0588 + 10967169-10967286,10967420-10967969,10968385-10968487
Length = 256
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = -2
Query: 114 YNALKFLEALGPDLWAAIDNDHILVTIRFLWLLLQPSC 1
++ L F LG D WA +D D+ + W P C
Sbjct: 136 WSTLSFDLYLGVDRWATVDKDYAHEAVFVAWASWAPVC 173
>05_05_0228 + 23454434-23455456,23456151-23456555,23456657-23457004
Length = 591
Score = 27.9 bits (59), Expect = 5.3
Identities = 11/37 (29%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +1
Query: 319 IPKEWEPPSPQPFK-VQSDLQWYLMDPDAYDQFLVGI 426
+P+E P +P + S + W + PD +D + GI
Sbjct: 454 LPEETPQPPAEPIAAILSPILWQINSPDLFDMYSAGI 490
>04_03_0053 -
10286076-10286516,10286560-10287586,10287756-10288096,
10288198-10288248
Length = 619
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 418 VGIGTGVSLQVWQNALPEPLMLQERPNWTETYAVWS 525
+GI ++L + +A EPLM WT++ WS
Sbjct: 104 IGISQALALTIVNSAKDEPLMAAATYFWTKSIGGWS 139
>04_03_0812 -
19922208-19922357,19922448-19922564,19922681-19922752,
19922864-19923993,19924939-19925008,19925125-19925199
Length = 537
Score = 27.5 bits (58), Expect = 7.0
Identities = 18/78 (23%), Positives = 39/78 (50%)
Frame = +1
Query: 19 KPKESDGYENVIVVDGCPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTESGATTGFIF 198
K ++SDG+E+ ++ ++ ++ + + K G +V ++ ++G G +
Sbjct: 52 KHEKSDGHEDYGLL---VSEKAKKYAIIKELDEPVTLKDGTVVLQFEVRLQNGLECGGAY 108
Query: 199 LEYTNPQNAAEAVKATNN 252
L+Y PQ+AA K +N
Sbjct: 109 LKYIRPQDAAWDAKEFDN 126
>02_05_0627 +
30463452-30463774,30463841-30463956,30464125-30464371,
30464458-30464555,30465216-30465284,30465752-30465820,
30465913-30466028
Length = 345
Score = 27.5 bits (58), Expect = 7.0
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +1
Query: 103 QSVINKIFSKFGKIVN-EYYPTTESGATTGFIFLEYTNPQNAAEAVKATN 249
+ + F FG++V + S + G+ F+EYT + A+KA N
Sbjct: 292 EKTLRAAFEPFGELVEVKIIMDKISKRSKGYAFIEYTTEEAGGAALKAMN 341
>04_02_0004 -
8430902-8431210,8431295-8431445,8431542-8431830,
8431873-8432083,8432184-8432380,8432454-8432555,
8432666-8433998
Length = 863
Score = 27.1 bits (57), Expect = 9.2
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -2
Query: 429 TNANQELVIGIWIHQIPL 376
TN+ +L +G+W +QIP+
Sbjct: 51 TNSTSDLYVGVWYNQIPV 68
>03_02_0553 -
9420960-9421164,9421634-9421812,9421902-9421970,
9422452-9422607,9422756-9422968
Length = 273
Score = 27.1 bits (57), Expect = 9.2
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +1
Query: 112 INKIFSKFGKIVNEYYPTTESGATTGFIFLEYTNPQNAAEAVKATNNCKLD 264
I ++FS+ G + SG + G + + +A AVK NN +LD
Sbjct: 122 IKELFSELGDLKKYVIHYDRSGRSKGTAEVVFARRGDAVAAVKKYNNVQLD 172
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.315 0.134 0.416
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,509,827
Number of Sequences: 37544
Number of extensions: 371758
Number of successful extensions: 731
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 730
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1154538620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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