Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_J06
(526 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U78525-1|AAC99479.1| 814|Homo sapiens eukaryotic translation in... 197 2e-50
U62583-1|AAB42010.1| 873|Homo sapiens Prt1 homolog protein. 197 2e-50
BC110865-1|AAI10866.1| 814|Homo sapiens eukaryotic translation ... 197 2e-50
BC001173-1|AAH01173.1| 814|Homo sapiens EIF3S9 protein protein. 197 2e-50
AC004971-1|AAP21880.1| 385|Homo sapiens unknown protein. 197 2e-50
BC009986-1|AAH09986.1| 622|Homo sapiens Unknown (protein for IM... 175 1e-43
Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding pro... 36 0.087
U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein p... 36 0.087
BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein... 36 0.087
BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein... 36 0.087
BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein. 36 0.087
DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein. 35 0.15
BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein... 35 0.15
BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein... 35 0.15
AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein... 35 0.15
AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific poly(A)... 35 0.15
U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding pro... 34 0.27
U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding... 34 0.27
D12799-1|BAA02244.1| 193|Homo sapiens polyadenylate binding pro... 34 0.27
BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein. 34 0.27
BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein. 34 0.27
BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein. 34 0.27
AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein... 34 0.27
AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein... 34 0.27
AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein... 34 0.27
AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein... 34 0.27
AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein... 34 0.27
AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein... 34 0.27
U90236-1|AAC51654.2| 1262|Homo sapiens myosin VI protein. 33 0.61
BC146764-1|AAI46765.1| 1285|Homo sapiens myosin VI protein. 33 0.61
AL136093-4|CAI42826.1| 1253|Homo sapiens myosin VI protein. 33 0.61
AL136093-3|CAI42824.1| 1262|Homo sapiens myosin VI protein. 33 0.61
AL136093-2|CAI42825.1| 1285|Homo sapiens myosin VI protein. 33 0.61
AL109897-3|CAI19522.1| 1253|Homo sapiens myosin VI protein. 33 0.61
AL109897-2|CAI19520.1| 1262|Homo sapiens myosin VI protein. 33 0.61
AL109897-1|CAI19521.1| 1285|Homo sapiens myosin VI protein. 33 0.61
AF229111-1|AAK00229.1| 1285|Homo sapiens myosin VI protein. 33 0.61
AB002387-1|BAA20843.2| 1296|Homo sapiens KIAA0389 protein. 33 0.61
U38175-1|AAB41913.1| 326|Homo sapiens HuR RNA binding protein p... 31 2.5
M29063-1|AAA36576.1| 303|Homo sapiens protein ( Human hnRNP C2 ... 31 2.5
M16342-1|AAA52680.1| 290|Homo sapiens SNRPC protein. 31 2.5
L35013-1|AAA60300.1| 424|Homo sapiens spliceosomal protein prot... 31 2.5
BT009793-1|AAP88795.1| 326|Homo sapiens ELAV (embryonic lethal,... 31 2.5
BC108658-1|AAI08659.1| 293|Homo sapiens heterogeneous nuclear r... 31 2.5
BC103758-1|AAI03759.1| 293|Homo sapiens heterogeneous nuclear r... 31 2.5
BC090883-1|AAH90883.1| 424|Homo sapiens splicing factor 3b, sub... 31 2.5
BC089438-1|AAH89438.1| 250|Homo sapiens HNRPC protein protein. 31 2.5
BC066932-1|AAH66932.1| 293|Homo sapiens heterogeneous nuclear r... 31 2.5
BC028588-1|AAH28588.1| 533|Homo sapiens hypothetical protein MG... 31 2.5
BC013886-1|AAH13886.1| 424|Homo sapiens splicing factor 3b, sub... 31 2.5
BC008423-1|AAH08423.1| 306|Homo sapiens heterogeneous nuclear r... 31 2.5
BC008364-1|AAH08364.1| 293|Homo sapiens heterogeneous nuclear r... 31 2.5
BC007052-1|AAH07052.1| 306|Homo sapiens heterogeneous nuclear r... 31 2.5
BC004273-1|AAH04273.1| 424|Homo sapiens splicing factor 3b, sub... 31 2.5
BC003394-1|AAH03394.1| 293|Homo sapiens heterogeneous nuclear r... 31 2.5
BC003376-1|AAH03376.1| 326|Homo sapiens ELAV (embryonic lethal,... 31 2.5
AL591493-2|CAI12554.1| 424|Homo sapiens splicing factor 3b, sub... 31 2.5
AL590487-2|CAI12648.1| 424|Homo sapiens splicing factor 3b, sub... 31 2.5
AB209527-1|BAD92764.1| 313|Homo sapiens Heterogeneous nuclear r... 31 2.5
BC006137-1|AAH06137.1| 960|Homo sapiens RBM19 protein protein. 30 5.7
BC004289-1|AAH04289.1| 960|Homo sapiens RBM19 protein protein. 30 5.7
AB014582-1|BAA31657.2| 973|Homo sapiens KIAA0682 protein protein. 30 5.7
U76702-1|AAC64321.1| 263|Homo sapiens follistatin-related prote... 29 10.0
BC033119-1|AAH33119.1| 263|Homo sapiens follistatin-like 3 (sec... 29 10.0
BC005839-1|AAH05839.1| 263|Homo sapiens follistatin-like 3 (sec... 29 10.0
AY358917-1|AAQ89276.1| 263|Homo sapiens FSTL3 protein. 29 10.0
AK223322-1|BAD97042.1| 424|Homo sapiens splicing factor 3b, sub... 29 10.0
>U78525-1|AAC99479.1| 814|Homo sapiens eukaryotic translation
initiation factor protein.
Length = 814
Score = 197 bits (481), Expect = 2e-50
Identities = 90/172 (52%), Positives = 124/172 (72%)
Frame = +1
Query: 10 LEQKPKESDGYENVIVVDGCPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTESGATTG 189
L+ +P+E+DG ++VIVVD PQVGP+RLEKL++VI+KIFSKFGKI N++YP E G T G
Sbjct: 173 LKDRPQEADGIDSVIVVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYPE-EDGKTKG 231
Query: 190 FIFLEYTNPQNAAEAVKATNNCKLDKQHTFLVNLFTDFNKYSDIPKEWEPPSPQPFKVQS 369
+IFLEY +P +A +AVK + KLDKQHTF VNLFTDF+KY I EW+ P QPFK
Sbjct: 232 YIFLEYASPAHAVDAVKNADGYKLDKQHTFRVNLFTDFDKYMTISDEWDIPEKQPFKDLG 291
Query: 370 DLQWYLMDPDAYDQFLVGIGTGVSLQVWQNALPEPLMLQERPNWTETYAVWS 525
+L+++L + + DQ+ V +G ++ N + +P+ ++ER WTETY WS
Sbjct: 292 NLRYWLEEAECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYVRWS 343
>U62583-1|AAB42010.1| 873|Homo sapiens Prt1 homolog protein.
Length = 873
Score = 197 bits (481), Expect = 2e-50
Identities = 90/172 (52%), Positives = 124/172 (72%)
Frame = +1
Query: 10 LEQKPKESDGYENVIVVDGCPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTESGATTG 189
L+ +P+E+DG ++VIVVD PQVGP+RLEKL++VI+KIFSKFGKI N++YP E G T G
Sbjct: 173 LKDRPQEADGIDSVIVVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYPE-EDGKTKG 231
Query: 190 FIFLEYTNPQNAAEAVKATNNCKLDKQHTFLVNLFTDFNKYSDIPKEWEPPSPQPFKVQS 369
+IFLEY +P +A +AVK + KLDKQHTF VNLFTDF+KY I EW+ P QPFK
Sbjct: 232 YIFLEYASPAHAVDAVKNADGYKLDKQHTFRVNLFTDFDKYMTISDEWDIPEKQPFKDLG 291
Query: 370 DLQWYLMDPDAYDQFLVGIGTGVSLQVWQNALPEPLMLQERPNWTETYAVWS 525
+L+++L + + DQ+ V +G ++ N + +P+ ++ER WTETY WS
Sbjct: 292 NLRYWLEEAECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYVRWS 343
>BC110865-1|AAI10866.1| 814|Homo sapiens eukaryotic translation
initiation factor 3, subunit B protein.
Length = 814
Score = 197 bits (481), Expect = 2e-50
Identities = 90/172 (52%), Positives = 124/172 (72%)
Frame = +1
Query: 10 LEQKPKESDGYENVIVVDGCPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTESGATTG 189
L+ +P+E+DG ++VIVVD PQVGP+RLEKL++VI+KIFSKFGKI N++YP E G T G
Sbjct: 173 LKDRPQEADGIDSVIVVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYPE-EDGKTKG 231
Query: 190 FIFLEYTNPQNAAEAVKATNNCKLDKQHTFLVNLFTDFNKYSDIPKEWEPPSPQPFKVQS 369
+IFLEY +P +A +AVK + KLDKQHTF VNLFTDF+KY I EW+ P QPFK
Sbjct: 232 YIFLEYASPAHAVDAVKNADGYKLDKQHTFRVNLFTDFDKYMTISDEWDIPEKQPFKDLG 291
Query: 370 DLQWYLMDPDAYDQFLVGIGTGVSLQVWQNALPEPLMLQERPNWTETYAVWS 525
+L+++L + + DQ+ V +G ++ N + +P+ ++ER WTETY WS
Sbjct: 292 NLRYWLEEAECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYVRWS 343
>BC001173-1|AAH01173.1| 814|Homo sapiens EIF3S9 protein protein.
Length = 814
Score = 197 bits (481), Expect = 2e-50
Identities = 90/172 (52%), Positives = 124/172 (72%)
Frame = +1
Query: 10 LEQKPKESDGYENVIVVDGCPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTESGATTG 189
L+ +P+E+DG ++VIVVD PQVGP+RLEKL++VI+KIFSKFGKI N++YP E G T G
Sbjct: 173 LKDRPQEADGIDSVIVVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYPE-EDGKTKG 231
Query: 190 FIFLEYTNPQNAAEAVKATNNCKLDKQHTFLVNLFTDFNKYSDIPKEWEPPSPQPFKVQS 369
+IFLEY +P +A +AVK + KLDKQHTF VNLFTDF+KY I EW+ P QPFK
Sbjct: 232 YIFLEYASPAHAVDAVKNADGYKLDKQHTFRVNLFTDFDKYMTISDEWDIPEKQPFKDLG 291
Query: 370 DLQWYLMDPDAYDQFLVGIGTGVSLQVWQNALPEPLMLQERPNWTETYAVWS 525
+L+++L + + DQ+ V +G ++ N + +P+ ++ER WTETY WS
Sbjct: 292 NLRYWLEEAECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYVRWS 343
>AC004971-1|AAP21880.1| 385|Homo sapiens unknown protein.
Length = 385
Score = 197 bits (481), Expect = 2e-50
Identities = 90/172 (52%), Positives = 124/172 (72%)
Frame = +1
Query: 10 LEQKPKESDGYENVIVVDGCPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTESGATTG 189
L+ +P+E+DG ++VIVVD PQVGP+RLEKL++VI+KIFSKFGKI N++YP E G T G
Sbjct: 173 LKDRPQEADGIDSVIVVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYPE-EDGKTKG 231
Query: 190 FIFLEYTNPQNAAEAVKATNNCKLDKQHTFLVNLFTDFNKYSDIPKEWEPPSPQPFKVQS 369
+IFLEY +P +A +AVK + KLDKQHTF VNLFTDF+KY I EW+ P QPFK
Sbjct: 232 YIFLEYASPAHAVDAVKNADGYKLDKQHTFRVNLFTDFDKYMTISDEWDIPEKQPFKDLG 291
Query: 370 DLQWYLMDPDAYDQFLVGIGTGVSLQVWQNALPEPLMLQERPNWTETYAVWS 525
+L+++L + + DQ+ V +G ++ N + +P+ ++ER WTETY WS
Sbjct: 292 NLRYWLEEAECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYVRWS 343
>BC009986-1|AAH09986.1| 622|Homo sapiens Unknown (protein for
IMAGE:4124553) protein.
Length = 622
Score = 175 bits (425), Expect = 1e-43
Identities = 80/152 (52%), Positives = 108/152 (71%)
Frame = +1
Query: 70 PQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTESGATTGFIFLEYTNPQNAAEAVKATN 249
PQVGP+RLEKL++VI+KIFSKFGKI N++YP E G T G+IFLEY +P +A +AVK +
Sbjct: 2 PQVGPDRLEKLKNVIHKIFSKFGKITNDFYPE-EDGKTKGYIFLEYASPAHAVDAVKNAD 60
Query: 250 NCKLDKQHTFLVNLFTDFNKYSDIPKEWEPPSPQPFKVQSDLQWYLMDPDAYDQFLVGIG 429
KLDKQHTF VNLFTDF+KY I EW+ P QPFK +L+++L + + DQ+ V
Sbjct: 61 GYKLDKQHTFRVNLFTDFDKYMTISDEWDIPEKQPFKDLGNLRYWLEEAECRDQYSVIFE 120
Query: 430 TGVSLQVWQNALPEPLMLQERPNWTETYAVWS 525
+G ++ N + +P+ ++ER WTETY WS
Sbjct: 121 SGDRTSIFWNDVKDPVSIEERARWTETYVRWS 152
>Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding
protein II protein.
Length = 522
Score = 35.9 bits (79), Expect = 0.087
Identities = 17/75 (22%), Positives = 39/75 (52%)
Frame = +1
Query: 112 INKIFSKFGKIVNEYYPTTESGATTGFIFLEYTNPQNAAEAVKATNNCKLDKQHTFLVNL 291
+ +F KFG ++ T ESG + GF F+ + ++A +AV N +L+ + ++
Sbjct: 182 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 241
Query: 292 FTDFNKYSDIPKEWE 336
+ +++ +++E
Sbjct: 242 QKKVERQTELKRKFE 256
>U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein
protein.
Length = 636
Score = 35.9 bits (79), Expect = 0.087
Identities = 17/75 (22%), Positives = 39/75 (52%)
Frame = +1
Query: 112 INKIFSKFGKIVNEYYPTTESGATTGFIFLEYTNPQNAAEAVKATNNCKLDKQHTFLVNL 291
+ +F KFG ++ T ESG + GF F+ + ++A +AV N +L+ + ++
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 266
Query: 292 FTDFNKYSDIPKEWE 336
+ +++ +++E
Sbjct: 267 QKKVERQTELKRKFE 281
>BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 35.9 bits (79), Expect = 0.087
Identities = 17/75 (22%), Positives = 39/75 (52%)
Frame = +1
Query: 112 INKIFSKFGKIVNEYYPTTESGATTGFIFLEYTNPQNAAEAVKATNNCKLDKQHTFLVNL 291
+ +F KFG ++ T ESG + GF F+ + ++A +AV N +L+ + ++
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 266
Query: 292 FTDFNKYSDIPKEWE 336
+ +++ +++E
Sbjct: 267 QKKVERQTELKRKFE 281
>BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 35.9 bits (79), Expect = 0.087
Identities = 17/75 (22%), Positives = 39/75 (52%)
Frame = +1
Query: 112 INKIFSKFGKIVNEYYPTTESGATTGFIFLEYTNPQNAAEAVKATNNCKLDKQHTFLVNL 291
+ +F KFG ++ T ESG + GF F+ + ++A +AV N +L+ + ++
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 266
Query: 292 FTDFNKYSDIPKEWE 336
+ +++ +++E
Sbjct: 267 QKKVERQTELKRKFE 281
>BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein.
Length = 636
Score = 35.9 bits (79), Expect = 0.087
Identities = 17/75 (22%), Positives = 39/75 (52%)
Frame = +1
Query: 112 INKIFSKFGKIVNEYYPTTESGATTGFIFLEYTNPQNAAEAVKATNNCKLDKQHTFLVNL 291
+ +F KFG ++ T ESG + GF F+ + ++A +AV N +L+ + ++
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 266
Query: 292 FTDFNKYSDIPKEWE 336
+ +++ +++E
Sbjct: 267 QKKVERQTELKRKFE 281
>DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein.
Length = 630
Score = 35.1 bits (77), Expect = 0.15
Identities = 17/75 (22%), Positives = 38/75 (50%)
Frame = +1
Query: 112 INKIFSKFGKIVNEYYPTTESGATTGFIFLEYTNPQNAAEAVKATNNCKLDKQHTFLVNL 291
+ +F KFG ++ T ESG + GF F+ + ++A +AV N +L+ + ++
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 266
Query: 292 FTDFNKYSDIPKEWE 336
+ +++ + +E
Sbjct: 267 QKKVERQTELKRTFE 281
>BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 35.1 bits (77), Expect = 0.15
Identities = 17/75 (22%), Positives = 38/75 (50%)
Frame = +1
Query: 112 INKIFSKFGKIVNEYYPTTESGATTGFIFLEYTNPQNAAEAVKATNNCKLDKQHTFLVNL 291
+ +F KFG ++ T ESG + GF F+ + ++A +AV N +L+ + ++
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 266
Query: 292 FTDFNKYSDIPKEWE 336
+ +++ + +E
Sbjct: 267 QKKVERQTELKRTFE 281
>BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 35.1 bits (77), Expect = 0.15
Identities = 17/75 (22%), Positives = 38/75 (50%)
Frame = +1
Query: 112 INKIFSKFGKIVNEYYPTTESGATTGFIFLEYTNPQNAAEAVKATNNCKLDKQHTFLVNL 291
+ +F KFG ++ T ESG + GF F+ + ++A +AV N +L+ + ++
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 266
Query: 292 FTDFNKYSDIPKEWE 336
+ +++ + +E
Sbjct: 267 QKKVERQTELKRTFE 281
>AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 35.1 bits (77), Expect = 0.15
Identities = 17/75 (22%), Positives = 38/75 (50%)
Frame = +1
Query: 112 INKIFSKFGKIVNEYYPTTESGATTGFIFLEYTNPQNAAEAVKATNNCKLDKQHTFLVNL 291
+ +F KFG ++ T ESG + GF F+ + ++A +AV N +L+ + ++
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 266
Query: 292 FTDFNKYSDIPKEWE 336
+ +++ + +E
Sbjct: 267 QKKVERQTELKRTFE 281
>AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific
poly(A)-binding protein protein.
Length = 631
Score = 35.1 bits (77), Expect = 0.15
Identities = 17/75 (22%), Positives = 38/75 (50%)
Frame = +1
Query: 112 INKIFSKFGKIVNEYYPTTESGATTGFIFLEYTNPQNAAEAVKATNNCKLDKQHTFLVNL 291
+ +F KFG ++ T ESG + GF F+ + ++A +AV N +L+ + ++
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 266
Query: 292 FTDFNKYSDIPKEWE 336
+ +++ + +E
Sbjct: 267 QKKVERQTELKRTFE 281
>U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding
protein protein.
Length = 644
Score = 34.3 bits (75), Expect = 0.27
Identities = 18/96 (18%), Positives = 46/96 (47%)
Frame = +1
Query: 112 INKIFSKFGKIVNEYYPTTESGATTGFIFLEYTNPQNAAEAVKATNNCKLDKQHTFLVNL 291
+ ++FS+FGK ++ +G + GF F+ Y ++A +AV+ N ++ + F+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA 266
Query: 292 FTDFNKYSDIPKEWEPPSPQPFKVQSDLQWYLMDPD 399
+ +++ +++E + + Y+ + D
Sbjct: 267 QKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLD 302
>U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding
protein protein.
Length = 644
Score = 34.3 bits (75), Expect = 0.27
Identities = 18/96 (18%), Positives = 46/96 (47%)
Frame = +1
Query: 112 INKIFSKFGKIVNEYYPTTESGATTGFIFLEYTNPQNAAEAVKATNNCKLDKQHTFLVNL 291
+ ++FS+FGK ++ +G + GF F+ Y ++A +AV+ N ++ + F+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA 266
Query: 292 FTDFNKYSDIPKEWEPPSPQPFKVQSDLQWYLMDPD 399
+ +++ +++E + + Y+ + D
Sbjct: 267 QKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLD 302
>D12799-1|BAA02244.1| 193|Homo sapiens polyadenylate binding
protein II protein.
Length = 193
Score = 34.3 bits (75), Expect = 0.27
Identities = 18/96 (18%), Positives = 46/96 (47%)
Frame = +1
Query: 112 INKIFSKFGKIVNEYYPTTESGATTGFIFLEYTNPQNAAEAVKATNNCKLDKQHTFLVNL 291
+ ++FS+FGK ++ +G + GF F+ Y ++A +AV+ N ++ + F+
Sbjct: 18 LKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA 77
Query: 292 FTDFNKYSDIPKEWEPPSPQPFKVQSDLQWYLMDPD 399
+ +++ +++E + + Y+ + D
Sbjct: 78 QKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLD 113
>BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 34.3 bits (75), Expect = 0.27
Identities = 18/96 (18%), Positives = 46/96 (47%)
Frame = +1
Query: 112 INKIFSKFGKIVNEYYPTTESGATTGFIFLEYTNPQNAAEAVKATNNCKLDKQHTFLVNL 291
+ ++FS+FGK ++ +G + GF F+ Y ++A +AV+ N ++ + F+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA 266
Query: 292 FTDFNKYSDIPKEWEPPSPQPFKVQSDLQWYLMDPD 399
+ +++ +++E + + Y+ + D
Sbjct: 267 QKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLD 302
>BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 34.3 bits (75), Expect = 0.27
Identities = 18/96 (18%), Positives = 46/96 (47%)
Frame = +1
Query: 112 INKIFSKFGKIVNEYYPTTESGATTGFIFLEYTNPQNAAEAVKATNNCKLDKQHTFLVNL 291
+ ++FS+FGK ++ +G + GF F+ Y ++A +AV+ N ++ + F+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA 266
Query: 292 FTDFNKYSDIPKEWEPPSPQPFKVQSDLQWYLMDPD 399
+ +++ +++E + + Y+ + D
Sbjct: 267 QKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLD 302
>BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein.
Length = 631
Score = 34.3 bits (75), Expect = 0.27
Identities = 18/96 (18%), Positives = 46/96 (47%)
Frame = +1
Query: 112 INKIFSKFGKIVNEYYPTTESGATTGFIFLEYTNPQNAAEAVKATNNCKLDKQHTFLVNL 291
+ ++FS+FGK ++ +G + GF F+ Y ++A +AV+ N ++ + F+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA 266
Query: 292 FTDFNKYSDIPKEWEPPSPQPFKVQSDLQWYLMDPD 399
+ +++ +++E + + Y+ + D
Sbjct: 267 QKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLD 302
>AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibletaining 6 protein.
Length = 644
Score = 34.3 bits (75), Expect = 0.27
Identities = 18/96 (18%), Positives = 46/96 (47%)
Frame = +1
Query: 112 INKIFSKFGKIVNEYYPTTESGATTGFIFLEYTNPQNAAEAVKATNNCKLDKQHTFLVNL 291
+ ++FS+FGK ++ +G + GF F+ Y ++A +AV+ N ++ + F+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA 266
Query: 292 FTDFNKYSDIPKEWEPPSPQPFKVQSDLQWYLMDPD 399
+ +++ +++E + + Y+ + D
Sbjct: 267 QKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLD 302
>AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleseudogene protein.
Length = 660
Score = 34.3 bits (75), Expect = 0.27
Identities = 18/96 (18%), Positives = 46/96 (47%)
Frame = +1
Query: 112 INKIFSKFGKIVNEYYPTTESGATTGFIFLEYTNPQNAAEAVKATNNCKLDKQHTFLVNL 291
+ ++FS+FGK ++ +G + GF F+ Y ++A +AV+ N ++ + F+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA 266
Query: 292 FTDFNKYSDIPKEWEPPSPQPFKVQSDLQWYLMDPD 399
+ +++ +++E + + Y+ + D
Sbjct: 267 QKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLD 302
>AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleeudogene protein.
Length = 615
Score = 34.3 bits (75), Expect = 0.27
Identities = 18/96 (18%), Positives = 46/96 (47%)
Frame = +1
Query: 112 INKIFSKFGKIVNEYYPTTESGATTGFIFLEYTNPQNAAEAVKATNNCKLDKQHTFLVNL 291
+ ++FS+FGK ++ +G + GF F+ Y ++A +AV+ N ++ + F+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA 266
Query: 292 FTDFNKYSDIPKEWEPPSPQPFKVQSDLQWYLMDPD 399
+ +++ +++E + + Y+ + D
Sbjct: 267 QKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLD 302
>AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblepeptide, antigen CD29 includes
protein.
Length = 644
Score = 34.3 bits (75), Expect = 0.27
Identities = 18/96 (18%), Positives = 46/96 (47%)
Frame = +1
Query: 112 INKIFSKFGKIVNEYYPTTESGATTGFIFLEYTNPQNAAEAVKATNNCKLDKQHTFLVNL 291
+ ++FS+FGK ++ +G + GF F+ Y ++A +AV+ N ++ + F+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA 266
Query: 292 FTDFNKYSDIPKEWEPPSPQPFKVQSDLQWYLMDPD 399
+ +++ +++E + + Y+ + D
Sbjct: 267 QKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLD 302
>AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducible) pseudogene protein.
Length = 660
Score = 34.3 bits (75), Expect = 0.27
Identities = 18/96 (18%), Positives = 46/96 (47%)
Frame = +1
Query: 112 INKIFSKFGKIVNEYYPTTESGATTGFIFLEYTNPQNAAEAVKATNNCKLDKQHTFLVNL 291
+ ++FS+FGK ++ +G + GF F+ Y ++A +AV+ N ++ + F+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA 266
Query: 292 FTDFNKYSDIPKEWEPPSPQPFKVQSDLQWYLMDPD 399
+ +++ +++E + + Y+ + D
Sbjct: 267 QKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLD 302
>AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblely, member 5 protein.
Length = 615
Score = 34.3 bits (75), Expect = 0.27
Identities = 18/96 (18%), Positives = 46/96 (47%)
Frame = +1
Query: 112 INKIFSKFGKIVNEYYPTTESGATTGFIFLEYTNPQNAAEAVKATNNCKLDKQHTFLVNL 291
+ ++FS+FGK ++ +G + GF F+ Y ++A +AV+ N ++ + F+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA 266
Query: 292 FTDFNKYSDIPKEWEPPSPQPFKVQSDLQWYLMDPD 399
+ +++ +++E + + Y+ + D
Sbjct: 267 QKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLD 302
>U90236-1|AAC51654.2| 1262|Homo sapiens myosin VI protein.
Length = 1262
Score = 33.1 bits (72), Expect = 0.61
Identities = 27/118 (22%), Positives = 52/118 (44%), Gaps = 2/118 (1%)
Frame = +1
Query: 22 PKESDGYENVIVVDGCPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTESGA--TTGFI 195
P +DG++ +VD +GP+ L +N+ F ++N+ +P E
Sbjct: 10 PHPTDGFQMGNIVD----IGPDSLTI--EPLNQKGKTFLALINQVFPAEEDSKKDVEDNC 63
Query: 196 FLEYTNPQNAAEAVKATNNCKLDKQHTFLVNLFTDFNKYSDIPKEWEPPSPQPFKVQS 369
L Y N +K + D+ +T++ N+ N Y DIPK + + + ++ +S
Sbjct: 64 SLMYLNEATLLHNIKVRYS--KDRIYTYVANILIAVNPYFDIPKIYSSEAIKSYQGKS 119
>BC146764-1|AAI46765.1| 1285|Homo sapiens myosin VI protein.
Length = 1285
Score = 33.1 bits (72), Expect = 0.61
Identities = 27/118 (22%), Positives = 52/118 (44%), Gaps = 2/118 (1%)
Frame = +1
Query: 22 PKESDGYENVIVVDGCPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTESGA--TTGFI 195
P +DG++ +VD +GP+ L +N+ F ++N+ +P E
Sbjct: 10 PHPTDGFQMGNIVD----IGPDSLTI--EPLNQKGKTFLALINQVFPAEEDSKKDVEDNC 63
Query: 196 FLEYTNPQNAAEAVKATNNCKLDKQHTFLVNLFTDFNKYSDIPKEWEPPSPQPFKVQS 369
L Y N +K + D+ +T++ N+ N Y DIPK + + + ++ +S
Sbjct: 64 SLMYLNEATLLHNIKVRYS--KDRIYTYVANILIAVNPYFDIPKIYSSEAIKSYQGKS 119
>AL136093-4|CAI42826.1| 1253|Homo sapiens myosin VI protein.
Length = 1253
Score = 33.1 bits (72), Expect = 0.61
Identities = 27/118 (22%), Positives = 52/118 (44%), Gaps = 2/118 (1%)
Frame = +1
Query: 22 PKESDGYENVIVVDGCPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTESGA--TTGFI 195
P +DG++ +VD +GP+ L +N+ F ++N+ +P E
Sbjct: 10 PHPTDGFQMGNIVD----IGPDSLTI--EPLNQKGKTFLALINQVFPAEEDSKKDVEDNC 63
Query: 196 FLEYTNPQNAAEAVKATNNCKLDKQHTFLVNLFTDFNKYSDIPKEWEPPSPQPFKVQS 369
L Y N +K + D+ +T++ N+ N Y DIPK + + + ++ +S
Sbjct: 64 SLMYLNEATLLHNIKVRYS--KDRIYTYVANILIAVNPYFDIPKIYSSEAIKSYQGKS 119
>AL136093-3|CAI42824.1| 1262|Homo sapiens myosin VI protein.
Length = 1262
Score = 33.1 bits (72), Expect = 0.61
Identities = 27/118 (22%), Positives = 52/118 (44%), Gaps = 2/118 (1%)
Frame = +1
Query: 22 PKESDGYENVIVVDGCPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTESGA--TTGFI 195
P +DG++ +VD +GP+ L +N+ F ++N+ +P E
Sbjct: 10 PHPTDGFQMGNIVD----IGPDSLTI--EPLNQKGKTFLALINQVFPAEEDSKKDVEDNC 63
Query: 196 FLEYTNPQNAAEAVKATNNCKLDKQHTFLVNLFTDFNKYSDIPKEWEPPSPQPFKVQS 369
L Y N +K + D+ +T++ N+ N Y DIPK + + + ++ +S
Sbjct: 64 SLMYLNEATLLHNIKVRYS--KDRIYTYVANILIAVNPYFDIPKIYSSEAIKSYQGKS 119
>AL136093-2|CAI42825.1| 1285|Homo sapiens myosin VI protein.
Length = 1285
Score = 33.1 bits (72), Expect = 0.61
Identities = 27/118 (22%), Positives = 52/118 (44%), Gaps = 2/118 (1%)
Frame = +1
Query: 22 PKESDGYENVIVVDGCPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTESGA--TTGFI 195
P +DG++ +VD +GP+ L +N+ F ++N+ +P E
Sbjct: 10 PHPTDGFQMGNIVD----IGPDSLTI--EPLNQKGKTFLALINQVFPAEEDSKKDVEDNC 63
Query: 196 FLEYTNPQNAAEAVKATNNCKLDKQHTFLVNLFTDFNKYSDIPKEWEPPSPQPFKVQS 369
L Y N +K + D+ +T++ N+ N Y DIPK + + + ++ +S
Sbjct: 64 SLMYLNEATLLHNIKVRYS--KDRIYTYVANILIAVNPYFDIPKIYSSEAIKSYQGKS 119
>AL109897-3|CAI19522.1| 1253|Homo sapiens myosin VI protein.
Length = 1253
Score = 33.1 bits (72), Expect = 0.61
Identities = 27/118 (22%), Positives = 52/118 (44%), Gaps = 2/118 (1%)
Frame = +1
Query: 22 PKESDGYENVIVVDGCPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTESGA--TTGFI 195
P +DG++ +VD +GP+ L +N+ F ++N+ +P E
Sbjct: 10 PHPTDGFQMGNIVD----IGPDSLTI--EPLNQKGKTFLALINQVFPAEEDSKKDVEDNC 63
Query: 196 FLEYTNPQNAAEAVKATNNCKLDKQHTFLVNLFTDFNKYSDIPKEWEPPSPQPFKVQS 369
L Y N +K + D+ +T++ N+ N Y DIPK + + + ++ +S
Sbjct: 64 SLMYLNEATLLHNIKVRYS--KDRIYTYVANILIAVNPYFDIPKIYSSEAIKSYQGKS 119
>AL109897-2|CAI19520.1| 1262|Homo sapiens myosin VI protein.
Length = 1262
Score = 33.1 bits (72), Expect = 0.61
Identities = 27/118 (22%), Positives = 52/118 (44%), Gaps = 2/118 (1%)
Frame = +1
Query: 22 PKESDGYENVIVVDGCPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTESGA--TTGFI 195
P +DG++ +VD +GP+ L +N+ F ++N+ +P E
Sbjct: 10 PHPTDGFQMGNIVD----IGPDSLTI--EPLNQKGKTFLALINQVFPAEEDSKKDVEDNC 63
Query: 196 FLEYTNPQNAAEAVKATNNCKLDKQHTFLVNLFTDFNKYSDIPKEWEPPSPQPFKVQS 369
L Y N +K + D+ +T++ N+ N Y DIPK + + + ++ +S
Sbjct: 64 SLMYLNEATLLHNIKVRYS--KDRIYTYVANILIAVNPYFDIPKIYSSEAIKSYQGKS 119
>AL109897-1|CAI19521.1| 1285|Homo sapiens myosin VI protein.
Length = 1285
Score = 33.1 bits (72), Expect = 0.61
Identities = 27/118 (22%), Positives = 52/118 (44%), Gaps = 2/118 (1%)
Frame = +1
Query: 22 PKESDGYENVIVVDGCPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTESGA--TTGFI 195
P +DG++ +VD +GP+ L +N+ F ++N+ +P E
Sbjct: 10 PHPTDGFQMGNIVD----IGPDSLTI--EPLNQKGKTFLALINQVFPAEEDSKKDVEDNC 63
Query: 196 FLEYTNPQNAAEAVKATNNCKLDKQHTFLVNLFTDFNKYSDIPKEWEPPSPQPFKVQS 369
L Y N +K + D+ +T++ N+ N Y DIPK + + + ++ +S
Sbjct: 64 SLMYLNEATLLHNIKVRYS--KDRIYTYVANILIAVNPYFDIPKIYSSEAIKSYQGKS 119
>AF229111-1|AAK00229.1| 1285|Homo sapiens myosin VI protein.
Length = 1285
Score = 33.1 bits (72), Expect = 0.61
Identities = 27/118 (22%), Positives = 52/118 (44%), Gaps = 2/118 (1%)
Frame = +1
Query: 22 PKESDGYENVIVVDGCPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTESGA--TTGFI 195
P +DG++ +VD +GP+ L +N+ F ++N+ +P E
Sbjct: 10 PHPTDGFQMGNIVD----IGPDSLTI--EPLNQKGKTFLALINQVFPAEEDSKKDVEDNC 63
Query: 196 FLEYTNPQNAAEAVKATNNCKLDKQHTFLVNLFTDFNKYSDIPKEWEPPSPQPFKVQS 369
L Y N +K + D+ +T++ N+ N Y DIPK + + + ++ +S
Sbjct: 64 SLMYLNEATLLHNIKVRYS--KDRIYTYVANILIAVNPYFDIPKIYSSEAIKSYQGKS 119
>AB002387-1|BAA20843.2| 1296|Homo sapiens KIAA0389 protein.
Length = 1296
Score = 33.1 bits (72), Expect = 0.61
Identities = 27/118 (22%), Positives = 52/118 (44%), Gaps = 2/118 (1%)
Frame = +1
Query: 22 PKESDGYENVIVVDGCPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTESGA--TTGFI 195
P +DG++ +VD +GP+ L +N+ F ++N+ +P E
Sbjct: 21 PHPTDGFQMGNIVD----IGPDSLTI--EPLNQKGKTFLALINQVFPAEEDSKKDVEDNC 74
Query: 196 FLEYTNPQNAAEAVKATNNCKLDKQHTFLVNLFTDFNKYSDIPKEWEPPSPQPFKVQS 369
L Y N +K + D+ +T++ N+ N Y DIPK + + + ++ +S
Sbjct: 75 SLMYLNEATLLHNIKVRYS--KDRIYTYVANILIAVNPYFDIPKIYSSEAIKSYQGKS 130
>U38175-1|AAB41913.1| 326|Homo sapiens HuR RNA binding protein
protein.
Length = 326
Score = 31.1 bits (67), Expect = 2.5
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +1
Query: 103 QSVINKIFSKFGKIVNEYYPTTE-SGATTGFIFLEYTNPQNAAEAVKATNNCK 258
Q + +FS+FG+I+N + +G + G F+ + A EA+ + N K
Sbjct: 119 QKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHK 171
>M29063-1|AAA36576.1| 303|Homo sapiens protein ( Human hnRNP C2
protein mRNA. ).
Length = 303
Score = 31.1 bits (67), Expect = 2.5
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +1
Query: 103 QSVINKIFSKFGKIVNEYYPTTESGATTGFIFLEYTNPQNAAEAV 237
+S + IFSK+GKIV GF F++Y N +NA AV
Sbjct: 30 KSDVEAIFSKYGKIVG-------CSVHKGFAFVQYVNERNARAAV 67
>M16342-1|AAA52680.1| 290|Homo sapiens SNRPC protein.
Length = 290
Score = 31.1 bits (67), Expect = 2.5
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +1
Query: 103 QSVINKIFSKFGKIVNEYYPTTESGATTGFIFLEYTNPQNAAEAV 237
+S + IFSK+GKIV GF F++Y N +NA AV
Sbjct: 30 KSDVEAIFSKYGKIVG-------CSVHKGFAFVQYVNERNARAAV 67
>L35013-1|AAA60300.1| 424|Homo sapiens spliceosomal protein
protein.
Length = 424
Score = 31.1 bits (67), Expect = 2.5
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +1
Query: 118 KIFSKFGKIVNEYYPTTE-SGATTGFIFLEYTNPQNAAEAVKATNNCKLDKQHTFLVNLF 294
++F + G +VN + P +G G+ F+E+ + ++A A+K N KL + VN
Sbjct: 31 ELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGK-PIRVNKA 89
Query: 295 TDFNKYSDI 321
+ NK D+
Sbjct: 90 SAHNKNLDV 98
>BT009793-1|AAP88795.1| 326|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 1 (Hu antigen R)
protein.
Length = 326
Score = 31.1 bits (67), Expect = 2.5
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +1
Query: 103 QSVINKIFSKFGKIVNEYYPTTE-SGATTGFIFLEYTNPQNAAEAVKATNNCK 258
Q + +FS+FG+I+N + +G + G F+ + A EA+ + N K
Sbjct: 119 QKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHK 171
>BC108658-1|AAI08659.1| 293|Homo sapiens heterogeneous nuclear
ribonucleoprotein C (C1/C2) protein.
Length = 293
Score = 31.1 bits (67), Expect = 2.5
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +1
Query: 103 QSVINKIFSKFGKIVNEYYPTTESGATTGFIFLEYTNPQNAAEAV 237
+S + IFSK+GKIV GF F++Y N +NA AV
Sbjct: 30 KSDVEAIFSKYGKIVG-------CSVHKGFAFVQYVNERNARAAV 67
>BC103758-1|AAI03759.1| 293|Homo sapiens heterogeneous nuclear
ribonucleoprotein C (C1/C2) protein.
Length = 293
Score = 31.1 bits (67), Expect = 2.5
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +1
Query: 103 QSVINKIFSKFGKIVNEYYPTTESGATTGFIFLEYTNPQNAAEAV 237
+S + IFSK+GKIV GF F++Y N +NA AV
Sbjct: 30 KSDVEAIFSKYGKIVG-------CSVHKGFAFVQYVNERNARAAV 67
>BC090883-1|AAH90883.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 31.1 bits (67), Expect = 2.5
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +1
Query: 118 KIFSKFGKIVNEYYPTTE-SGATTGFIFLEYTNPQNAAEAVKATNNCKLDKQHTFLVNLF 294
++F + G +VN + P +G G+ F+E+ + ++A A+K N KL + VN
Sbjct: 31 ELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGK-PIRVNKA 89
Query: 295 TDFNKYSDI 321
+ NK D+
Sbjct: 90 SAHNKNLDV 98
>BC089438-1|AAH89438.1| 250|Homo sapiens HNRPC protein protein.
Length = 250
Score = 31.1 bits (67), Expect = 2.5
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +1
Query: 103 QSVINKIFSKFGKIVNEYYPTTESGATTGFIFLEYTNPQNAAEAV 237
+S + IFSK+GKIV GF F++Y N +NA AV
Sbjct: 30 KSDVEAIFSKYGKIVG-------CSVHKGFAFVQYVNERNARAAV 67
>BC066932-1|AAH66932.1| 293|Homo sapiens heterogeneous nuclear
ribonucleoprotein C (C1/C2) protein.
Length = 293
Score = 31.1 bits (67), Expect = 2.5
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +1
Query: 103 QSVINKIFSKFGKIVNEYYPTTESGATTGFIFLEYTNPQNAAEAV 237
+S + IFSK+GKIV GF F++Y N +NA AV
Sbjct: 30 KSDVEAIFSKYGKIVG-------CSVHKGFAFVQYVNERNARAAV 67
>BC028588-1|AAH28588.1| 533|Homo sapiens hypothetical protein
MGC27016 protein.
Length = 533
Score = 31.1 bits (67), Expect = 2.5
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = +1
Query: 37 GYENVIVVDGCPQ-VGPERLEKLQSVINKIFSKFGKIVNEYYPTTESGATTGFIFLEYTN 213
G+E GC VG + + + +F + GKI SG G+ F+ YT
Sbjct: 51 GWEGPPPPRGCEVFVGKIPRDMYEDELVPVFERAGKIYEFRLMMEFSGENRGYAFVMYTT 110
Query: 214 PQNAAEAVKATNNCKL 261
+ A A++ NN ++
Sbjct: 111 KEEAQLAIRILNNYEI 126
>BC013886-1|AAH13886.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 31.1 bits (67), Expect = 2.5
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +1
Query: 118 KIFSKFGKIVNEYYPTTE-SGATTGFIFLEYTNPQNAAEAVKATNNCKLDKQHTFLVNLF 294
++F + G +VN + P +G G+ F+E+ + ++A A+K N KL + VN
Sbjct: 31 ELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGK-PIRVNKA 89
Query: 295 TDFNKYSDI 321
+ NK D+
Sbjct: 90 SAHNKNLDV 98
>BC008423-1|AAH08423.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein C (C1/C2) protein.
Length = 306
Score = 31.1 bits (67), Expect = 2.5
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +1
Query: 103 QSVINKIFSKFGKIVNEYYPTTESGATTGFIFLEYTNPQNAAEAV 237
+S + IFSK+GKIV GF F++Y N +NA AV
Sbjct: 30 KSDVEAIFSKYGKIVG-------CSVHKGFAFVQYVNERNARAAV 67
>BC008364-1|AAH08364.1| 293|Homo sapiens heterogeneous nuclear
ribonucleoprotein C (C1/C2) protein.
Length = 293
Score = 31.1 bits (67), Expect = 2.5
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +1
Query: 103 QSVINKIFSKFGKIVNEYYPTTESGATTGFIFLEYTNPQNAAEAV 237
+S + IFSK+GKIV GF F++Y N +NA AV
Sbjct: 30 KSDVEAIFSKYGKIVG-------CSVHKGFAFVQYVNERNARAAV 67
>BC007052-1|AAH07052.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein C (C1/C2) protein.
Length = 306
Score = 31.1 bits (67), Expect = 2.5
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +1
Query: 103 QSVINKIFSKFGKIVNEYYPTTESGATTGFIFLEYTNPQNAAEAV 237
+S + IFSK+GKIV GF F++Y N +NA AV
Sbjct: 30 KSDVEAIFSKYGKIVG-------CSVHKGFAFVQYVNERNARAAV 67
>BC004273-1|AAH04273.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 31.1 bits (67), Expect = 2.5
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +1
Query: 118 KIFSKFGKIVNEYYPTTE-SGATTGFIFLEYTNPQNAAEAVKATNNCKLDKQHTFLVNLF 294
++F + G +VN + P +G G+ F+E+ + ++A A+K N KL + VN
Sbjct: 31 ELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGK-PIRVNKA 89
Query: 295 TDFNKYSDI 321
+ NK D+
Sbjct: 90 SAHNKNLDV 98
>BC003394-1|AAH03394.1| 293|Homo sapiens heterogeneous nuclear
ribonucleoprotein C (C1/C2) protein.
Length = 293
Score = 31.1 bits (67), Expect = 2.5
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +1
Query: 103 QSVINKIFSKFGKIVNEYYPTTESGATTGFIFLEYTNPQNAAEAV 237
+S + IFSK+GKIV GF F++Y N +NA AV
Sbjct: 30 KSDVEAIFSKYGKIVG-------CSVHKGFAFVQYVNERNARAAV 67
>BC003376-1|AAH03376.1| 326|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 1 (Hu antigen R)
protein.
Length = 326
Score = 31.1 bits (67), Expect = 2.5
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +1
Query: 103 QSVINKIFSKFGKIVNEYYPTTE-SGATTGFIFLEYTNPQNAAEAVKATNNCK 258
Q + +FS+FG+I+N + +G + G F+ + A EA+ + N K
Sbjct: 119 QKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHK 171
>AL591493-2|CAI12554.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 31.1 bits (67), Expect = 2.5
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +1
Query: 118 KIFSKFGKIVNEYYPTTE-SGATTGFIFLEYTNPQNAAEAVKATNNCKLDKQHTFLVNLF 294
++F + G +VN + P +G G+ F+E+ + ++A A+K N KL + VN
Sbjct: 31 ELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGK-PIRVNKA 89
Query: 295 TDFNKYSDI 321
+ NK D+
Sbjct: 90 SAHNKNLDV 98
>AL590487-2|CAI12648.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 31.1 bits (67), Expect = 2.5
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +1
Query: 118 KIFSKFGKIVNEYYPTTE-SGATTGFIFLEYTNPQNAAEAVKATNNCKLDKQHTFLVNLF 294
++F + G +VN + P +G G+ F+E+ + ++A A+K N KL + VN
Sbjct: 31 ELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGK-PIRVNKA 89
Query: 295 TDFNKYSDI 321
+ NK D+
Sbjct: 90 SAHNKNLDV 98
>AB209527-1|BAD92764.1| 313|Homo sapiens Heterogeneous nuclear
ribonucleoproteins C1/C2 variant protein.
Length = 313
Score = 31.1 bits (67), Expect = 2.5
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +1
Query: 103 QSVINKIFSKFGKIVNEYYPTTESGATTGFIFLEYTNPQNAAEAV 237
+S + IFSK+GKIV GF F++Y N +NA AV
Sbjct: 37 KSDVEAIFSKYGKIVG-------CSVHKGFAFVQYVNERNARAAV 74
>BC006137-1|AAH06137.1| 960|Homo sapiens RBM19 protein protein.
Length = 960
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +1
Query: 112 INKIFSKFGKIVNEYYPTTE-SGATTGFIFLEYTNPQNAAEA 234
+ K+FSK+G + +YP + GF F+ + P++A +A
Sbjct: 418 LEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKA 459
>BC004289-1|AAH04289.1| 960|Homo sapiens RBM19 protein protein.
Length = 960
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +1
Query: 112 INKIFSKFGKIVNEYYPTTE-SGATTGFIFLEYTNPQNAAEA 234
+ K+FSK+G + +YP + GF F+ + P++A +A
Sbjct: 418 LEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKA 459
>AB014582-1|BAA31657.2| 973|Homo sapiens KIAA0682 protein protein.
Length = 973
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +1
Query: 112 INKIFSKFGKIVNEYYPTTE-SGATTGFIFLEYTNPQNAAEA 234
+ K+FSK+G + +YP + GF F+ + P++A +A
Sbjct: 431 LEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKA 472
>U76702-1|AAC64321.1| 263|Homo sapiens follistatin-related protein
FLRG protein.
Length = 263
Score = 29.1 bits (62), Expect = 10.0
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 488 SCNIKGSGNAFCHTCRLTPVPMPT 417
SC + +G+A C CR P P+P+
Sbjct: 181 SCVVDQTGSAHCVVCRAAPCPVPS 204
>BC033119-1|AAH33119.1| 263|Homo sapiens follistatin-like 3
(secreted glycoprotein) protein.
Length = 263
Score = 29.1 bits (62), Expect = 10.0
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 488 SCNIKGSGNAFCHTCRLTPVPMPT 417
SC + +G+A C CR P P+P+
Sbjct: 181 SCVVDQTGSAHCVVCRAAPCPVPS 204
>BC005839-1|AAH05839.1| 263|Homo sapiens follistatin-like 3
(secreted glycoprotein) protein.
Length = 263
Score = 29.1 bits (62), Expect = 10.0
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 488 SCNIKGSGNAFCHTCRLTPVPMPT 417
SC + +G+A C CR P P+P+
Sbjct: 181 SCVVDQTGSAHCVVCRAAPCPVPS 204
>AY358917-1|AAQ89276.1| 263|Homo sapiens FSTL3 protein.
Length = 263
Score = 29.1 bits (62), Expect = 10.0
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 488 SCNIKGSGNAFCHTCRLTPVPMPT 417
SC + +G+A C CR P P+P+
Sbjct: 181 SCVVDQTGSAHCVVCRAAPCPVPS 204
>AK223322-1|BAD97042.1| 424|Homo sapiens splicing factor 3b,
subunit 4 variant protein.
Length = 424
Score = 29.1 bits (62), Expect = 10.0
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +1
Query: 118 KIFSKFGKIVNEYYPTTE-SGATTGFIFLEYTNPQNAAEAVKATNNCKLDKQHTFLVNLF 294
++F + G +VN + P +G G+ F+E+ + ++A A+K + KL + VN
Sbjct: 31 ELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMDMIKLYGK-PIRVNKA 89
Query: 295 TDFNKYSDI 321
+ NK D+
Sbjct: 90 SAHNKNLDV 98
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.315 0.134 0.416
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,798,891
Number of Sequences: 237096
Number of extensions: 2211929
Number of successful extensions: 4356
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 4174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4350
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5046825278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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