Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_J06
(526 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II lar... 26 0.21
DQ855483-1|ABH88170.1| 117|Apis mellifera chemosensory protein ... 25 0.63
AJ973398-1|CAJ01445.1| 117|Apis mellifera hypothetical protein ... 25 0.63
AF393494-1|AAL60419.1| 144|Apis mellifera odorant binding prote... 24 1.1
AF166496-1|AAD51944.1| 144|Apis mellifera pheromone-binding pro... 24 1.1
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 23 1.4
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 23 1.4
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 23 1.9
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 23 1.9
AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodo... 23 1.9
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 23 1.9
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 23 2.5
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 22 3.3
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 22 4.4
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 22 4.4
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 22 4.4
U15955-1|AAA67443.1| 95|Apis mellifera defensin precursor prot... 21 5.8
AY496432-1|AAS75803.1| 95|Apis mellifera defensin/royalisin pr... 21 5.8
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 21 7.7
>DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II large
subunit protein.
Length = 296
Score = 26.2 bits (55), Expect = 0.21
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1
Query: 442 LQVWQNALPEPLMLQERPNWT 504
L W +P+P +L+ +P WT
Sbjct: 28 LPSWDGKMPQPCILKPKPLWT 48
>DQ855483-1|ABH88170.1| 117|Apis mellifera chemosensory protein 2
protein.
Length = 117
Score = 24.6 bits (51), Expect = 0.63
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Frame = +1
Query: 49 VIVVDGCPQVGPE---RLEKLQSVINKIFSK-FGKIVNEY 156
+++ CPQ PE +++K+ S I + + K + KIV +Y
Sbjct: 74 LVLRGACPQCSPEETRQIKKVLSHIQRTYPKEWSKIVQQY 113
>AJ973398-1|CAJ01445.1| 117|Apis mellifera hypothetical protein
protein.
Length = 117
Score = 24.6 bits (51), Expect = 0.63
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Frame = +1
Query: 49 VIVVDGCPQVGPE---RLEKLQSVINKIFSK-FGKIVNEY 156
+++ CPQ PE +++K+ S I + + K + KIV +Y
Sbjct: 74 LVLRGACPQCSPEETRQIKKVLSHIQRTYPKEWSKIVQQY 113
>AF393494-1|AAL60419.1| 144|Apis mellifera odorant binding protein
ASP1 protein.
Length = 144
Score = 23.8 bits (49), Expect = 1.1
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -2
Query: 123 NLIYNALKFLEALGPDLWAAI 61
N IYN K ++ PD+W I
Sbjct: 124 NKIYNLAKCVQESAPDVWFVI 144
>AF166496-1|AAD51944.1| 144|Apis mellifera pheromone-binding
protein ASP1 protein.
Length = 144
Score = 23.8 bits (49), Expect = 1.1
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -2
Query: 123 NLIYNALKFLEALGPDLWAAI 61
N IYN K ++ PD+W I
Sbjct: 124 NKIYNLAKCVQESAPDVWFVI 144
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 23.4 bits (48), Expect = 1.4
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +1
Query: 73 QVGPERLEKLQSVINKIFSKFGKIVNE 153
Q+ P+R++ Q N++++ KIV+E
Sbjct: 324 QITPKRIQYAQHKENELYANLMKIVHE 350
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 23.4 bits (48), Expect = 1.4
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +1
Query: 73 QVGPERLEKLQSVINKIFSKFGKIVNE 153
Q+ P+R++ Q N++++ KIV+E
Sbjct: 362 QITPKRIQYAQHKENELYANLMKIVHE 388
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 23.0 bits (47), Expect = 1.9
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = -2
Query: 426 NANQELVIGIWIHQIPL*V*LYFEW 352
+A+ + GIW++ +PL + +Y W
Sbjct: 213 SASYLVCYGIWVYFVPLFLIIYSYW 237
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 23.0 bits (47), Expect = 1.9
Identities = 7/21 (33%), Positives = 11/21 (52%)
Frame = +3
Query: 381 VSDGSRCL*PVPGWHWYRGQS 443
+ +G L P P W W + Q+
Sbjct: 98 IGNGGPLLEPYPNWSWAKNQN 118
>AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength
rhodopsin protein.
Length = 154
Score = 23.0 bits (47), Expect = 1.9
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = -2
Query: 426 NANQELVIGIWIHQIPL*V*LYFEW 352
+A+ + GIW++ +PL + +Y W
Sbjct: 89 SASYLVCYGIWVYFVPLFLIIYSYW 113
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 23.0 bits (47), Expect = 1.9
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +3
Query: 381 VSDGSRCL*PVPGWHW 428
+ +G R L P P W W
Sbjct: 101 IGNGGRLLQPYPDWSW 116
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.6 bits (46), Expect = 2.5
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = +1
Query: 277 FLVNLFTDFNKYSDIPKEWEPPSPQPFKVQSDLQWYLMD 393
F V L T Y EW+PP+ + D++++ D
Sbjct: 125 FEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFD 163
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 22.2 bits (45), Expect = 3.3
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +2
Query: 287 ICSQILISTRIFRKNGSHLHPSHSKYNQ 370
IC ++ S R + S H HSK Q
Sbjct: 37 ICKRVYSSLNSLRNHKSIYHRQHSKNEQ 64
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 21.8 bits (44), Expect = 4.4
Identities = 8/26 (30%), Positives = 15/26 (57%)
Frame = -2
Query: 126 KNLIYNALKFLEALGPDLWAAIDNDH 49
+ +I +KFL P+LW ++ N +
Sbjct: 84 REVIKKVIKFLVENKPELWDSLANKY 109
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 21.8 bits (44), Expect = 4.4
Identities = 8/26 (30%), Positives = 15/26 (57%)
Frame = -2
Query: 126 KNLIYNALKFLEALGPDLWAAIDNDH 49
+ +I +KFL P+LW ++ N +
Sbjct: 84 REVIKKVIKFLVENKPELWDSLANKY 109
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 21.8 bits (44), Expect = 4.4
Identities = 8/26 (30%), Positives = 15/26 (57%)
Frame = -2
Query: 126 KNLIYNALKFLEALGPDLWAAIDNDH 49
+ +I +KFL P+LW ++ N +
Sbjct: 84 REVIKKVIKFLVENKPELWDSLANKY 109
>U15955-1|AAA67443.1| 95|Apis mellifera defensin precursor
protein.
Length = 95
Score = 21.4 bits (43), Expect = 5.8
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -1
Query: 379 IVGLIVL*MAGVKVAPILSEY 317
IVGL+ + M + AP+ E+
Sbjct: 6 IVGLLFMAMVAIMAAPVEDEF 26
>AY496432-1|AAS75803.1| 95|Apis mellifera defensin/royalisin
precursor protein.
Length = 95
Score = 21.4 bits (43), Expect = 5.8
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -1
Query: 379 IVGLIVL*MAGVKVAPILSEY 317
IVGL+ + M + AP+ E+
Sbjct: 6 IVGLLFMAMVAIMAAPVEDEF 26
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 21.0 bits (42), Expect = 7.7
Identities = 10/36 (27%), Positives = 14/36 (38%)
Frame = +3
Query: 318 YSERMGATFTPAIQSTIRPTMVSDGSRCL*PVPGWH 425
YSE + S I+ + S P+ GWH
Sbjct: 162 YSEARFEEIKKEVSSYIKKIGYNTASVAFVPISGWH 197
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.315 0.134 0.416
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,607
Number of Sequences: 438
Number of extensions: 4292
Number of successful extensions: 26
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14722920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)
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