Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_J05
         (163 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY366255-1|AAR16213.1|  455|Homo sapiens natural killer cell inh...    27   8.3  
AY366254-1|AAR16212.1|  455|Homo sapiens natural killer cell inh...    27   8.3  
AY366253-1|AAR16211.1|  455|Homo sapiens natural killer cell inh...    27   8.3  

>AY366255-1|AAR16213.1|  455|Homo sapiens natural killer cell
           inhibitory receptor protein.
          Length = 455

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = -2

Query: 144 LRHPVIMTSKLGS*VKAPIPPAIMQKTAYTKSPNAETRSKM 22
           L H V +  K+    + P  P +   + YT+ PNAE RSK+
Sbjct: 401 LDHCVFIQRKISRPCQRPKTP-LTDTSVYTELPNAEPRSKV 440


>AY366254-1|AAR16212.1|  455|Homo sapiens natural killer cell
           inhibitory receptor protein.
          Length = 455

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = -2

Query: 144 LRHPVIMTSKLGS*VKAPIPPAIMQKTAYTKSPNAETRSKM 22
           L H V +  K+    + P  P +   + YT+ PNAE RSK+
Sbjct: 401 LDHCVFIQRKISRPCQRPKTP-LTDTSVYTELPNAEPRSKV 440


>AY366253-1|AAR16211.1|  455|Homo sapiens natural killer cell
           inhibitory receptor protein.
          Length = 455

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = -2

Query: 144 LRHPVIMTSKLGS*VKAPIPPAIMQKTAYTKSPNAETRSKM 22
           L H V +  K+    + P  P +   + YT+ PNAE RSK+
Sbjct: 401 LDHCVFIQRKISRPCQRPKTP-LTDTSVYTELPNAEPRSKV 440


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,814,227
Number of Sequences: 237096
Number of extensions: 347546
Number of successful extensions: 1034
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1034
length of database: 76,859,062
effective HSP length: 33
effective length of database: 69,034,894
effective search space used: 1380697880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)