Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_J03
(643 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 132 3e-32
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 132 3e-32
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 132 3e-32
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 132 3e-32
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 132 3e-32
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 132 3e-32
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 132 3e-32
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 132 3e-32
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 132 3e-32
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 132 3e-32
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 132 3e-32
SPBC839.06 |cta3||P-type ATPase, calcium transporting Cta3|Schiz... 27 2.3
SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit ... 27 3.0
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 26 4.0
SPAC824.02 |||GPI inositol deacylase|Schizosaccharomyces pombe|c... 26 5.3
SPAC17A5.05c |||conserved fungal protein|Schizosaccharomyces pom... 25 7.0
SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces p... 25 9.3
SPCC417.08 |tef3||translation elongation factor eEF3|Schizosacch... 25 9.3
SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10 |Schizos... 25 9.3
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 132 bits (320), Expect = 3e-32
Identities = 67/185 (36%), Positives = 112/185 (60%), Gaps = 1/185 (0%)
Frame = +2
Query: 92 KRLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYL 271
++L ++IN AK + +V+F+G+ ++ G P + + VL + +PKN +ELR++L
Sbjct: 587 QKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFL 646
Query: 272 GMLNFYRKFIPNAAHVQAPLHNILSGQCLKATTLISWTPELEKSFEDSKSGLANATLLAH 451
G +N+ RKFIP + + PL+N+ LK WTP ++ E+ K L + +L H
Sbjct: 647 GSVNYLRKFIPKTSQLTHPLNNL-----LKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701
Query: 452 PNPRAHLAIMTDASDSAIGAVLQQK-SDSGWVPLGFFSKKLNNAQRKYSPYDRELLAIYE 628
+ + + TDASD A+GAVL QK D + P+G++S K++ AQ YS D+E+LAI +
Sbjct: 702 FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761
Query: 629 SIKYF 643
S+K++
Sbjct: 762 SLKHW 766
Score = 29.9 bits (64), Expect = 0.33
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +1
Query: 22 YSDDILIASRTKDEHEHHLRAVFQ 93
Y DDILI S+++ EH H++ V Q
Sbjct: 564 YMDDILIHSKSESEHVKHVKDVLQ 587
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 132 bits (320), Expect = 3e-32
Identities = 67/185 (36%), Positives = 112/185 (60%), Gaps = 1/185 (0%)
Frame = +2
Query: 92 KRLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYL 271
++L ++IN AK + +V+F+G+ ++ G P + + VL + +PKN +ELR++L
Sbjct: 587 QKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFL 646
Query: 272 GMLNFYRKFIPNAAHVQAPLHNILSGQCLKATTLISWTPELEKSFEDSKSGLANATLLAH 451
G +N+ RKFIP + + PL+N+ LK WTP ++ E+ K L + +L H
Sbjct: 647 GSVNYLRKFIPKTSQLTHPLNNL-----LKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701
Query: 452 PNPRAHLAIMTDASDSAIGAVLQQK-SDSGWVPLGFFSKKLNNAQRKYSPYDRELLAIYE 628
+ + + TDASD A+GAVL QK D + P+G++S K++ AQ YS D+E+LAI +
Sbjct: 702 FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761
Query: 629 SIKYF 643
S+K++
Sbjct: 762 SLKHW 766
Score = 29.9 bits (64), Expect = 0.33
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +1
Query: 22 YSDDILIASRTKDEHEHHLRAVFQ 93
Y DDILI S+++ EH H++ V Q
Sbjct: 564 YMDDILIHSKSESEHVKHVKDVLQ 587
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 132 bits (320), Expect = 3e-32
Identities = 67/185 (36%), Positives = 112/185 (60%), Gaps = 1/185 (0%)
Frame = +2
Query: 92 KRLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYL 271
++L ++IN AK + +V+F+G+ ++ G P + + VL + +PKN +ELR++L
Sbjct: 587 QKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFL 646
Query: 272 GMLNFYRKFIPNAAHVQAPLHNILSGQCLKATTLISWTPELEKSFEDSKSGLANATLLAH 451
G +N+ RKFIP + + PL+N+ LK WTP ++ E+ K L + +L H
Sbjct: 647 GSVNYLRKFIPKTSQLTHPLNNL-----LKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701
Query: 452 PNPRAHLAIMTDASDSAIGAVLQQK-SDSGWVPLGFFSKKLNNAQRKYSPYDRELLAIYE 628
+ + + TDASD A+GAVL QK D + P+G++S K++ AQ YS D+E+LAI +
Sbjct: 702 FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761
Query: 629 SIKYF 643
S+K++
Sbjct: 762 SLKHW 766
Score = 27.9 bits (59), Expect = 1.3
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 22 YSDDILIASRTKDEHEHHLRAVFQ 93
Y D+ILI S+++ EH H++ V Q
Sbjct: 564 YMDNILIHSKSESEHVKHVKDVLQ 587
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 132 bits (320), Expect = 3e-32
Identities = 67/185 (36%), Positives = 112/185 (60%), Gaps = 1/185 (0%)
Frame = +2
Query: 92 KRLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYL 271
++L ++IN AK + +V+F+G+ ++ G P + + VL + +PKN +ELR++L
Sbjct: 587 QKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFL 646
Query: 272 GMLNFYRKFIPNAAHVQAPLHNILSGQCLKATTLISWTPELEKSFEDSKSGLANATLLAH 451
G +N+ RKFIP + + PL+N+ LK WTP ++ E+ K L + +L H
Sbjct: 647 GSVNYLRKFIPKTSQLTHPLNNL-----LKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701
Query: 452 PNPRAHLAIMTDASDSAIGAVLQQK-SDSGWVPLGFFSKKLNNAQRKYSPYDRELLAIYE 628
+ + + TDASD A+GAVL QK D + P+G++S K++ AQ YS D+E+LAI +
Sbjct: 702 FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761
Query: 629 SIKYF 643
S+K++
Sbjct: 762 SLKHW 766
Score = 29.9 bits (64), Expect = 0.33
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +1
Query: 22 YSDDILIASRTKDEHEHHLRAVFQ 93
Y DDILI S+++ EH H++ V Q
Sbjct: 564 YMDDILIHSKSESEHVKHVKDVLQ 587
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 132 bits (320), Expect = 3e-32
Identities = 67/185 (36%), Positives = 112/185 (60%), Gaps = 1/185 (0%)
Frame = +2
Query: 92 KRLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYL 271
++L ++IN AK + +V+F+G+ ++ G P + + VL + +PKN +ELR++L
Sbjct: 587 QKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFL 646
Query: 272 GMLNFYRKFIPNAAHVQAPLHNILSGQCLKATTLISWTPELEKSFEDSKSGLANATLLAH 451
G +N+ RKFIP + + PL+N+ LK WTP ++ E+ K L + +L H
Sbjct: 647 GSVNYLRKFIPKTSQLTHPLNNL-----LKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701
Query: 452 PNPRAHLAIMTDASDSAIGAVLQQK-SDSGWVPLGFFSKKLNNAQRKYSPYDRELLAIYE 628
+ + + TDASD A+GAVL QK D + P+G++S K++ AQ YS D+E+LAI +
Sbjct: 702 FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761
Query: 629 SIKYF 643
S+K++
Sbjct: 762 SLKHW 766
Score = 27.9 bits (59), Expect = 1.3
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 22 YSDDILIASRTKDEHEHHLRAVFQ 93
Y D+ILI S+++ EH H++ V Q
Sbjct: 564 YMDNILIHSKSESEHVKHVKDVLQ 587
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 132 bits (320), Expect = 3e-32
Identities = 67/185 (36%), Positives = 112/185 (60%), Gaps = 1/185 (0%)
Frame = +2
Query: 92 KRLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYL 271
++L ++IN AK + +V+F+G+ ++ G P + + VL + +PKN +ELR++L
Sbjct: 587 QKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFL 646
Query: 272 GMLNFYRKFIPNAAHVQAPLHNILSGQCLKATTLISWTPELEKSFEDSKSGLANATLLAH 451
G +N+ RKFIP + + PL+N+ LK WTP ++ E+ K L + +L H
Sbjct: 647 GSVNYLRKFIPKTSQLTHPLNNL-----LKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701
Query: 452 PNPRAHLAIMTDASDSAIGAVLQQK-SDSGWVPLGFFSKKLNNAQRKYSPYDRELLAIYE 628
+ + + TDASD A+GAVL QK D + P+G++S K++ AQ YS D+E+LAI +
Sbjct: 702 FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761
Query: 629 SIKYF 643
S+K++
Sbjct: 762 SLKHW 766
Score = 29.9 bits (64), Expect = 0.33
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +1
Query: 22 YSDDILIASRTKDEHEHHLRAVFQ 93
Y DDILI S+++ EH H++ V Q
Sbjct: 564 YMDDILIHSKSESEHVKHVKDVLQ 587
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 132 bits (320), Expect = 3e-32
Identities = 67/185 (36%), Positives = 112/185 (60%), Gaps = 1/185 (0%)
Frame = +2
Query: 92 KRLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYL 271
++L ++IN AK + +V+F+G+ ++ G P + + VL + +PKN +ELR++L
Sbjct: 587 QKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFL 646
Query: 272 GMLNFYRKFIPNAAHVQAPLHNILSGQCLKATTLISWTPELEKSFEDSKSGLANATLLAH 451
G +N+ RKFIP + + PL+N+ LK WTP ++ E+ K L + +L H
Sbjct: 647 GSVNYLRKFIPKTSQLTHPLNNL-----LKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701
Query: 452 PNPRAHLAIMTDASDSAIGAVLQQK-SDSGWVPLGFFSKKLNNAQRKYSPYDRELLAIYE 628
+ + + TDASD A+GAVL QK D + P+G++S K++ AQ YS D+E+LAI +
Sbjct: 702 FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761
Query: 629 SIKYF 643
S+K++
Sbjct: 762 SLKHW 766
Score = 29.9 bits (64), Expect = 0.33
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +1
Query: 22 YSDDILIASRTKDEHEHHLRAVFQ 93
Y DDILI S+++ EH H++ V Q
Sbjct: 564 YMDDILIHSKSESEHVKHVKDVLQ 587
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 132 bits (320), Expect = 3e-32
Identities = 67/185 (36%), Positives = 112/185 (60%), Gaps = 1/185 (0%)
Frame = +2
Query: 92 KRLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYL 271
++L ++IN AK + +V+F+G+ ++ G P + + VL + +PKN +ELR++L
Sbjct: 587 QKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFL 646
Query: 272 GMLNFYRKFIPNAAHVQAPLHNILSGQCLKATTLISWTPELEKSFEDSKSGLANATLLAH 451
G +N+ RKFIP + + PL+N+ LK WTP ++ E+ K L + +L H
Sbjct: 647 GSVNYLRKFIPKTSQLTHPLNNL-----LKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701
Query: 452 PNPRAHLAIMTDASDSAIGAVLQQK-SDSGWVPLGFFSKKLNNAQRKYSPYDRELLAIYE 628
+ + + TDASD A+GAVL QK D + P+G++S K++ AQ YS D+E+LAI +
Sbjct: 702 FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761
Query: 629 SIKYF 643
S+K++
Sbjct: 762 SLKHW 766
Score = 29.9 bits (64), Expect = 0.33
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +1
Query: 22 YSDDILIASRTKDEHEHHLRAVFQ 93
Y DDILI S+++ EH H++ V Q
Sbjct: 564 YMDDILIHSKSESEHVKHVKDVLQ 587
>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 132 bits (320), Expect = 3e-32
Identities = 67/185 (36%), Positives = 112/185 (60%), Gaps = 1/185 (0%)
Frame = +2
Query: 92 KRLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYL 271
++L ++IN AK + +V+F+G+ ++ G P + + VL + +PKN +ELR++L
Sbjct: 587 QKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFL 646
Query: 272 GMLNFYRKFIPNAAHVQAPLHNILSGQCLKATTLISWTPELEKSFEDSKSGLANATLLAH 451
G +N+ RKFIP + + PL+N+ LK WTP ++ E+ K L + +L H
Sbjct: 647 GSVNYLRKFIPKTSQLTHPLNNL-----LKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701
Query: 452 PNPRAHLAIMTDASDSAIGAVLQQK-SDSGWVPLGFFSKKLNNAQRKYSPYDRELLAIYE 628
+ + + TDASD A+GAVL QK D + P+G++S K++ AQ YS D+E+LAI +
Sbjct: 702 FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761
Query: 629 SIKYF 643
S+K++
Sbjct: 762 SLKHW 766
Score = 27.9 bits (59), Expect = 1.3
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 22 YSDDILIASRTKDEHEHHLRAVFQ 93
Y D+ILI S+++ EH H++ V Q
Sbjct: 564 YMDNILIHSKSESEHVKHVKDVLQ 587
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 132 bits (320), Expect = 3e-32
Identities = 67/185 (36%), Positives = 112/185 (60%), Gaps = 1/185 (0%)
Frame = +2
Query: 92 KRLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYL 271
++L ++IN AK + +V+F+G+ ++ G P + + VL + +PKN +ELR++L
Sbjct: 587 QKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFL 646
Query: 272 GMLNFYRKFIPNAAHVQAPLHNILSGQCLKATTLISWTPELEKSFEDSKSGLANATLLAH 451
G +N+ RKFIP + + PL+N+ LK WTP ++ E+ K L + +L H
Sbjct: 647 GSVNYLRKFIPKTSQLTHPLNNL-----LKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701
Query: 452 PNPRAHLAIMTDASDSAIGAVLQQK-SDSGWVPLGFFSKKLNNAQRKYSPYDRELLAIYE 628
+ + + TDASD A+GAVL QK D + P+G++S K++ AQ YS D+E+LAI +
Sbjct: 702 FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761
Query: 629 SIKYF 643
S+K++
Sbjct: 762 SLKHW 766
Score = 29.9 bits (64), Expect = 0.33
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +1
Query: 22 YSDDILIASRTKDEHEHHLRAVFQ 93
Y DDILI S+++ EH H++ V Q
Sbjct: 564 YMDDILIHSKSESEHVKHVKDVLQ 587
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 132 bits (320), Expect = 3e-32
Identities = 67/185 (36%), Positives = 112/185 (60%), Gaps = 1/185 (0%)
Frame = +2
Query: 92 KRLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYL 271
++L ++IN AK + +V+F+G+ ++ G P + + VL + +PKN +ELR++L
Sbjct: 587 QKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFL 646
Query: 272 GMLNFYRKFIPNAAHVQAPLHNILSGQCLKATTLISWTPELEKSFEDSKSGLANATLLAH 451
G +N+ RKFIP + + PL+N+ LK WTP ++ E+ K L + +L H
Sbjct: 647 GSVNYLRKFIPKTSQLTHPLNNL-----LKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701
Query: 452 PNPRAHLAIMTDASDSAIGAVLQQK-SDSGWVPLGFFSKKLNNAQRKYSPYDRELLAIYE 628
+ + + TDASD A+GAVL QK D + P+G++S K++ AQ YS D+E+LAI +
Sbjct: 702 FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761
Query: 629 SIKYF 643
S+K++
Sbjct: 762 SLKHW 766
Score = 29.9 bits (64), Expect = 0.33
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +1
Query: 22 YSDDILIASRTKDEHEHHLRAVFQ 93
Y DDILI S+++ EH H++ V Q
Sbjct: 564 YMDDILIHSKSESEHVKHVKDVLQ 587
>SPBC839.06 |cta3||P-type ATPase, calcium transporting
Cta3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1037
Score = 27.1 bits (57), Expect = 2.3
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -3
Query: 584 VERCSVSSRKILEEPSLNLIFA 519
+ERCS S+ LEEP LI A
Sbjct: 527 LERCSTSNGSTLEEPDRELIIA 548
>SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit
Sec63 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 611
Score = 26.6 bits (56), Expect = 3.0
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +2
Query: 536 GWVPLGFFSKKLNNAQRKYSPYD-RELLAI 622
GW+ +GF S K+ N++ K + +D E+L I
Sbjct: 76 GWLAIGFLSYKIANSRLKLNIWDPYEILGI 105
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 26.2 bits (55), Expect = 4.0
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +1
Query: 19 PYSDDILIASRTKDEHEHHLRAVFQ 93
PY D ++ ++RT+DE ++ +FQ
Sbjct: 28 PYIDKLVASNRTRDERVESIQELFQ 52
>SPAC824.02 |||GPI inositol deacylase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1142
Score = 25.8 bits (54), Expect = 5.3
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +2
Query: 596 PYDRELLAIYESIKYF 643
P+DR L+ YESIK F
Sbjct: 300 PFDRHLVEFYESIKNF 315
>SPAC17A5.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 247
Score = 25.4 bits (53), Expect = 7.0
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -1
Query: 253 SYIFRTCII*YCTDLLCRWLNTCSSHRKTQ 164
S +F TC Y + CRWL H+K +
Sbjct: 177 SKLFSTC---YALSVQCRWLLVLGPHKKPE 203
>SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 555
Score = 25.0 bits (52), Expect = 9.3
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +1
Query: 115 THQLREISTWRS*SGISGFYG 177
TH+LR+ ++WR+ GI+ +G
Sbjct: 169 THKLRKTASWRTSFGINMLWG 189
>SPCC417.08 |tef3||translation elongation factor
eEF3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1047
Score = 25.0 bits (52), Expect = 9.3
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 212 VSAVLNYTRPKNIRELRRYLGMLNFYRKFIPNA 310
V A+++Y R K LR+YLG ++ + K +P+A
Sbjct: 613 VQAIIHYERFK----LRKYLGNMSEFVKKVPSA 641
>SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1649
Score = 25.0 bits (52), Expect = 9.3
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +1
Query: 454 KSTSTSSHHDRCLRQCYRRSVAAKIRFRLGSSRIFLEETEQRS 582
KST+ + HD CL SVA +I SR L+ E++S
Sbjct: 991 KSTNVVAIHDFCLTLVQSFSVADRIGSINQCSRFCLKSLEEQS 1033
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,642,045
Number of Sequences: 5004
Number of extensions: 52671
Number of successful extensions: 177
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 155
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 287744314
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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